Mock Version: 1.4.9 Mock Version: 1.4.9 ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/libsbml.spec'], chrootPath='/var/lib/mock/f29-build-10954-4956/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8', 'http_proxy': 'http://192.168.0.254:3128', 'https_proxy': 'http://192.168.0.254:3128'}shell=Falselogger=timeout=345600uid=998gid=135user='mockbuild'nspawn_args=[]unshare_net=FalseprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/libsbml.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8', 'http_proxy': 'http://192.168.0.254:3128', 'https_proxy': 'http://192.168.0.254:3128'} and shell False BUILDSTDERR: sh: /usr/bin/perl: No such file or directory BUILDSTDERR: sh: /usr/bin/perl: No such file or directory BUILDSTDERR: sh: /usr/bin/perl: No such file or directory Building target platforms: riscv64 Building for target riscv64 Wrote: /builddir/build/SRPMS/libsbml-5.17.0-1.fc29.src.rpm Child return code was: 0 ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/libsbml.spec'], chrootPath='/var/lib/mock/f29-build-10954-4956/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8', 'http_proxy': 'http://192.168.0.254:3128', 'https_proxy': 'http://192.168.0.254:3128'}shell=Falselogger=timeout=345600uid=998gid=135user='mockbuild'nspawn_args=[]unshare_net=FalseprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/libsbml.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8', 'http_proxy': 'http://192.168.0.254:3128', 'https_proxy': 'http://192.168.0.254:3128'} and shell False Building target platforms: riscv64 Building for target riscv64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.ODr3Cn + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf libSBML-5.17.0-Source + /usr/bin/gzip -dc /builddir/build/SOURCES/libSBML-5.17.0-core-plus-packages-src.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd libSBML-5.17.0-Source + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + echo 'Patch #0 (libsbml-use-system-minizip-cmake.patch):' + /usr/bin/patch --no-backup-if-mismatch -p0 --fuzz=0 Patch #0 (libsbml-use-system-minizip-cmake.patch): patching file CMakeLists.txt patching file src/CMakeLists.txt patching file src/sbml/compress/zipfstream.h + echo 'Patch #1 (libsbml-fix_install_libpaths.patch):' Patch #1 (libsbml-fix_install_libpaths.patch): + /usr/bin/patch --no-backup-if-mismatch -p1 --fuzz=0 patching file src/bindings/ruby/CMakeLists.txt patching file src/bindings/csharp/CMakeLists.txt patching file src/bindings/octave/CMakeLists.txt patching file src/bindings/perl/CMakeLists.txt + unzip -n /builddir/build/SOURCES/libSBML-5.17.0-render-src.zip Archive: /builddir/build/SOURCES/libSBML-5.17.0-render-src.zip + iconv -f latin1 -t utf8 NEWS.txt + touch -r NEWS.txt t + mv t NEWS.txt BUILDSTDERR: ++ find docs/src/filters -type f '(' -name '*.py' ')' + for i in `find docs/src/filters -type f \( -name "*.py" \)` + sed -i -r 's|(#!/usr/bin/env python) +#.*|#!/usr/bin/python2|' docs/src/filters/doc-filter-python.py + for i in `find docs/src/filters -type f \( -name "*.py" \)` + sed -i -r 's|(#!/usr/bin/env python) +#.*|#!/usr/bin/python2|' docs/src/filters/doc-filter-c.py + for i in `find docs/src/filters -type f \( -name "*.py" \)` + sed -i -r 's|(#!/usr/bin/env python) +#.*|#!/usr/bin/python2|' docs/src/filters/doc-filter-csharp.py + rm -v src/sbml/compress/crypt.h src/sbml/compress/ioapi.c src/sbml/compress/ioapi.h src/sbml/compress/iowin32.c src/sbml/compress/iowin32.h src/sbml/compress/unzip.c src/sbml/compress/unzip.h src/sbml/compress/zip.c src/sbml/compress/zip.h removed 'src/sbml/compress/crypt.h' removed 'src/sbml/compress/ioapi.c' removed 'src/sbml/compress/ioapi.h' removed 'src/sbml/compress/iowin32.c' removed 'src/sbml/compress/iowin32.h' removed 'src/sbml/compress/unzip.c' removed 'src/sbml/compress/unzip.h' removed 'src/sbml/compress/zip.c' removed 'src/sbml/compress/zip.h' + grep -e 'This file was automatically generated by SWIG' -r . -l + xargs rm + mkdir build-docs BUILDSTDERR: ++ /bin/ls -1 BUILDSTDERR: ++ grep -v build-docs + cp -a AUTHORS.txt CMakeLists.txt COPYING.html COPYING.txt FUNDING.txt LICENSE.html LICENSE.txt Makefile.in NEWS.txt OLD_NEWS.txt README-extension.txt README.txt VERSION.txt VERSION_PACKAGES.ac acinclude.m4 aclocal.m4 cmake_uninstall.cmake.in common.cmake comp-package.cmake config configure configure.ac docs examples fbc-package.cmake groups-package.cmake layout-package.cmake libsbml.spec.in macosx multi-package.cmake qual-package.cmake render-package.cmake src build-docs/ + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.GrPKZB + umask 022 + cd /builddir/build/BUILD + cd libSBML-5.17.0-Source + mkdir -p build2 build + pushd build2 ~/build/BUILD/libSBML-5.17.0-Source/build2 ~/build/BUILD/libSBML-5.17.0-Source + export 'LDFLAGS=-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed' + LDFLAGS='-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed' + export 'CFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now' + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now' + export 'CXXFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now' + CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now' + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed' + export LDFLAGS + /usr/bin/cmake -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DENABLE_LAYOUT=ON -DENABLE_QUAL=ON -DENABLE_COMP=ON -DENABLE_FBC=ON -DENABLE_RENDER=ON -DENABLE_GROUPS=ON -DENABLE_MULTI=ON -DCSHARP_COMPILER:FILEPATH=/usr/bin/mcs -DWITH_PYTHON:BOOL=ON -DWITH_CHECK=ON -DPYTHON_INCLUDE_DIR:PATH=/usr/include/python2.7 -DPYTHON_LIBRARY:FILEPATH=/usr/lib64/libpython2.7.so -DPYTHON_EXECUTABLE:FILEPATH=/usr/bin/python2 -DCMAKE_INSTALL_LIBDIR:PATH=/usr/lib64 -DWITH_LIBXML:BOOL=ON -DWITH_EXPAT:BOOL=OFF -DWITH_MATLAB:BOOL=OFF -Wno-dev -DEXIT_ON_ERROR:BOOL=ON .. -- The C compiler identification is GNU 8.1.1 -- The CXX compiler identification is GNU 8.1.1 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compile features -- Detecting C compile features - done -- Found SWIG: /usr/bin/swig (found version "3.0.12") -- Looking for BZ2_bzCompressInit in /usr/lib64/libbz2.so -- Looking for BZ2_bzCompressInit in /usr/lib64/libbz2.so - found -- Looking for gzopen in /usr/lib64/libz.so -- Looking for gzopen in /usr/lib64/libz.so - found -- Found PkgConfig: /usr/bin/pkg-config (found version "1.4.2") -- Checking for module 'minizip' -- Found minizip, version 1.2.11 -- Looking for include file check.h -- Looking for include file check.h - found -- Looking for include file expat.h -- Looking for include file expat.h - found -- Looking for include file errno.h -- Looking for include file errno.h - found -- Looking for include file ieeefp.h -- Looking for include file ieeefp.h - not found -- Looking for include file math.h -- Looking for include file math.h - found -- Looking for include file sys/types.h -- Looking for include file sys/types.h - found -- Looking for include file float.h -- Looking for include file float.h - found -- Check if the system is big endian -- Searching 16 bit integer -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned short -- Check size of unsigned short - done -- Using unsigned short -- Check if the system is big endian - little endian -- Looking for sqrt in m -- Looking for sqrt in m - found -- Found PythonInterp: /usr/bin/python2 (found version "2.7.15") -- Found PythonLibs: /usr/lib64/libpython2.7.so (found version "2.7.15") -- ---------------------------------------------------------------------- libSBML version 5.17.0 ---------------------------------------------------------------------- More information and the latest version are available online at http://sbml.org/Software/libSBML Please report problems using the issue tracker at http://sbml.org/Software/libsbml/issue-tracker To contact the developers directly, email libsbml-team@googlegroups.com Configured on host 'vm05.home.annexia.org' host type = Linux host operating system = Linux 4.15.0-00044-g2b0aa1de45f6 host CPU architecture = riscv64 General build flags: CC = /usr/bin/cc CXX = /usr/bin/c++ CPPFLAGS = -DLINUX CFLAGS = -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC CXXFLAGS = -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC LDFLAGS = -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed XML parser library configuration: XML library = libxml2 CPPFLAGS for XML = -I/usr/include/libxml2 LIBS for XML = /usr/lib64/libxml2.so Other libSBML configuration settings: Installation $prefix = /usr -- Value of $LD_LIBRARY_PATH = -- Using SWIG = /usr/bin/swig (Version 3.0.12) -- Using Python = /usr/bin/python2 -- Using libcheck = /usr/lib64/libcheck.so -- Using C++ namespace ('libsbml') = no -- -- Build examples = no -- -- Use Legacy Math = no -- -- Support for SBML Level 3 Packages: -- SBML 'comp' package = ON -- SBML 'fbc' package = ON -- SBML 'groups' package = ON -- SBML 'layout' package = ON -- SBML 'multi' package = ON -- SBML 'qual' package = ON -- SBML 'render' package = ON -- -- Other potentially important settings: -- Compression support is enabled for .zip and .gz files -- Compression support is enabled for .bz2 files -- ---------------------------------------------------------------------- -- Configuring done -- Generating done BUILDSTDERR: CMake Warning: BUILDSTDERR: Manually-specified variables were not used by the project: BUILDSTDERR: CMAKE_Fortran_FLAGS_RELEASE BUILDSTDERR: CSHARP_COMPILER BUILDSTDERR: INCLUDE_INSTALL_DIR BUILDSTDERR: LIB_INSTALL_DIR BUILDSTDERR: LIB_SUFFIX BUILDSTDERR: SHARE_INSTALL_PREFIX BUILDSTDERR: SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/libSBML-5.17.0-Source/build2 + make -j4 /usr/bin/cmake -H/builddir/build/BUILD/libSBML-5.17.0-Source -B/builddir/build/BUILD/libSBML-5.17.0-Source/build2 --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSBML-5.17.0-Source/build2/CMakeFiles /builddir/build/BUILD/libSBML-5.17.0-Source/build2/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/CMakeFiles/sbml-static.dir/build.make src/CMakeFiles/sbml-static.dir/depend make -f src/CMakeFiles/sbml.dir/build.make src/CMakeFiles/sbml.dir/depend make -f src/bindings/python/CMakeFiles/binding_python_swig.dir/build.make src/bindings/python/CMakeFiles/binding_python_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python /builddir/build/BUILD/libSBML-5.17.0-Source/build2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python/CMakeFiles/binding_python_swig.dir/DependInfo.cmake --color= make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src /builddir/build/BUILD/libSBML-5.17.0-Source/build2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/CMakeFiles/sbml.dir/DependInfo.cmake --color= make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src /builddir/build/BUILD/libSBML-5.17.0-Source/build2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/CMakeFiles/sbml-static.dir/DependInfo.cmake --color= Scanning dependencies of target binding_python_swig make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/bindings/python/CMakeFiles/binding_python_swig.dir/build.make src/bindings/python/CMakeFiles/binding_python_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 0%] Swig Python source cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python && /usr/bin/python2 /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/../swig/swigdoc.py --language python --top /builddir/build/BUILD/libSBML-5.17.0-Source --master /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/../swig/libsbml.i --output /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python/pydoc-doxygen.i --define USE_COMP --define USE_FBC --define USE_GROUPS --define USE_LAYOUT --define USE_MULTI --define USE_QUAL --define USE_RENDER --define USE_COMP --define USE_FBC --define USE_GROUPS --define USE_MULTI --define USE_QUAL --define USE_RENDER cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python && /usr/bin/python2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python/generate-class-name-list.py /builddir/build/BUILD/libSBML-5.17.0-Source/src > /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python/class-list.txt Scanning dependencies of target sbml make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/CMakeFiles/sbml.dir/build.make src/CMakeFiles/sbml.dir/build Scanning dependencies of target sbml-static make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/CMakeFiles/sbml-static.dir/build.make src/CMakeFiles/sbml-static.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 0%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.cpp [ 0%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 1%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp: In member function 'Submodel* CompModelPlugin::createSubmodel()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp:309:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp: In member function 'Port* CompModelPlugin::createPort()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp:450:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp [ 1%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python && /usr/bin/python2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python/generate-converters-list.py /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python/class-list.txt > /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python/libsbml-converters.txt cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python && /usr/bin/python2 /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/doc-converter/rewrite_pydoc.py -f /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python/pydoc-doxygen.i -o /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python/pydoc-normal.i -i /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/../../../docs/src/common-text -g /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/../../../docs/src/common-graphics BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:66, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp: In member function 'ModelDefinition* CompSBMLDocumentPlugin::createModelDefinition()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:396:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp: In member function 'ExternalModelDefinition* CompSBMLDocumentPlugin::createExternalModelDefinition()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:537:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp: In member function 'Submodel* CompModelPlugin::createSubmodel()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp:309:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp: In member function 'Port* CompModelPlugin::createPort()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp:450:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 1%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:66, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp: In member function 'ModelDefinition* CompSBMLDocumentPlugin::createModelDefinition()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:396:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp: In member function 'ExternalModelDefinition* CompSBMLDocumentPlugin::createExternalModelDefinition()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:537:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 1%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.h:63, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:32: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'virtual SBase* CompSBasePlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:164:7: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'ReplacedElement* CompSBasePlugin::createReplacedElement()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:367:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'ReplacedBy* CompSBasePlugin::createReplacedBy()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:441:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'virtual void CompSBasePlugin::createListOfReplacedElements()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:548:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/CompBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/CompBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/CompBase.cpp [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Deletion.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Deletion.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Deletion.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.h:63, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:32: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'virtual SBase* CompSBasePlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:164:7: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'ReplacedElement* CompSBasePlugin::createReplacedElement()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:367:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'ReplacedBy* CompSBasePlugin::createReplacedBy()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:441:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'virtual void CompSBasePlugin::createListOfReplacedElements()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:548:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ExternalModelDefinition.cpp [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python && /usr/bin/cmake -E rename pydoc-doxygen.i pydoc.i cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python && /usr/bin/swig -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/../swig/ -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/include -DGENERATING_DOCS -c++ -python -DLIBSBML_COMPILED_IN_SRC -DUSE_LIBXML -DUSE_BZ2 -DUSE_ZLIB -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_LAYOUT -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_SWIG_PYTHON_2_UNICODE -o /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python/libsbml_wrap.cpp /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/libsbml.i BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp: In member function 'virtual SBase* ListOfDeletions::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp:158:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp [ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/CompBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/CompBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/CompBase.cpp [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp: In member function 'virtual SBase* ListOfExternalModelDefinitions::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp:151:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Deletion.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Deletion.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Deletion.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp: In member function 'virtual SBase* ListOfModelDefinitions::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp:151:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp [ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ExternalModelDefinition.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/../swig/std_set.i:65: Warning 314: 'del' is a python keyword, renaming to '_del' [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp: In member function 'virtual SBase* ListOfPorts::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp:150:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp: In member function 'virtual SBase* ListOfReplacedElements::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp:114:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp: In member function 'virtual SBase* ListOfDeletions::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp:158:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ModelDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ModelDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ModelDefinition.cpp [ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp: In member function 'virtual SBase* ListOfSubmodels::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp:150:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Port.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Port.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Port.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp: In member function 'virtual SBase* ListOfExternalModelDefinitions::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp:151:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ReplacedBy.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ReplacedBy.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ReplacedBy.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp: In member function 'virtual SBase* ListOfModelDefinitions::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp:151:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp [ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ReplacedElement.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ReplacedElement.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ReplacedElement.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp: In member function 'virtual SBase* ListOfPorts::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp:150:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Replacing.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Replacing.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Replacing.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp: In member function 'virtual SBase* ListOfReplacedElements::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp:114:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 3%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp [ 3%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ModelDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ModelDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ModelDefinition.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp: In member function 'virtual SBase* ListOfSubmodels::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp:150:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Submodel.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Submodel.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp [ 3%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Port.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Port.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Port.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:37: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp: In member function 'SBaseRef* SBaseRef::createSBaseRef()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:548:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp: In member function 'virtual SBase* SBaseRef::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:658:7: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:669:7: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp:39: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp: In member function 'Deletion* Submodel::createDeletion()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp:493:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/CompFlatteningConverter.cpp [ 4%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ReplacedBy.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ReplacedBy.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ReplacedBy.cpp [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/SBMLFileResolver.cpp [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolver.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolver.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/SBMLResolver.cpp [ 4%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ReplacedElement.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ReplacedElement.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ReplacedElement.cpp [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/SBMLResolverRegistry.cpp [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLUri.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLUri.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/SBMLUri.cpp [ 4%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Replacing.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Replacing.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Replacing.cpp [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/CompConsistencyValidator.cpp [ 4%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp [ 4%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Submodel.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Submodel.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:37: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp: In member function 'SBaseRef* SBaseRef::createSBaseRef()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:548:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp: In member function 'virtual SBase* SBaseRef::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:658:7: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:669:7: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp:39: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp: In member function 'Deletion* Submodel::createDeletion()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp:493:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp [ 4%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/CompFlatteningConverter.cpp [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp [ 4%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/SBMLFileResolver.cpp [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/CompValidator.cpp [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/ClassReplacements.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/ClassReplacements.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/ClassReplacements.cpp [ 4%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLResolver.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLResolver.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/SBMLResolver.cpp [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/CompIdBase.cpp [ 4%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/SBMLResolverRegistry.cpp [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp [ 4%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLUri.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLUri.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/SBMLUri.cpp [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp:31: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp: In member function 'void ExtModelReferenceCycles::logCycle(const Model&, std::__cxx11::string, std::__cxx11::string)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp:281:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, m.getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp [ 6%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/CompConsistencyValidator.cpp [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp:31: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp: In member function 'void SubmodelReferenceCycles::logCycle(const Model&, std::__cxx11::string, std::__cxx11::string)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp:320:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, m.getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp [ 6%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp [ 6%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp [ 6%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/CompValidator.cpp [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniquePortIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniquePortIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UniquePortIds.cpp [ 6%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/ClassReplacements.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/ClassReplacements.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/ClassReplacements.cpp [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp [ 6%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/CompIdBase.cpp [ 6%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp:31: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp: In member function 'void ExtModelReferenceCycles::logCycle(const Model&, std::__cxx11::string, std::__cxx11::string)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp:281:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, m.getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 6%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp [ 6%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp [ 6%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp:31: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp: In member function 'void SubmodelReferenceCycles::logCycle(const Model&, std::__cxx11::string, std::__cxx11::string)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp:320:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, m.getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 6%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp [ 6%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp.o [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp [ 7%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniquePortIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniquePortIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UniquePortIds.cpp [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.cpp [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp [ 7%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.h:141, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'virtual SBase* FbcModelPlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:193:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'FluxBound* FbcModelPlugin::createFluxBound()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:829:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'Objective* FbcModelPlugin::createObjective()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:1094:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'GeneProduct* FbcModelPlugin::createGeneProduct()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:1274:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'GeneAssociation* FbcModelPlugin::createGeneAssociation()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:1481:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 7%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp: In member function 'virtual SBase* FbcReactionPlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:144:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp: In member function 'GeneProductAssociation* FbcReactionPlugin::createGeneProductAssociation()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:442:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 7%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp [ 7%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.cpp [ 7%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp [ 8%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.h:141, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'virtual SBase* FbcModelPlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:193:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'FluxBound* FbcModelPlugin::createFluxBound()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:829:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'Objective* FbcModelPlugin::createObjective()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:1094:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'GeneProduct* FbcModelPlugin::createGeneProduct()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:1274:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'GeneAssociation* FbcModelPlugin::createGeneAssociation()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:1481:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Association.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Association.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Association.cpp [ 8%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp: In member function 'virtual SBase* FbcReactionPlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:144:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp: In member function 'GeneProductAssociation* FbcReactionPlugin::createGeneProductAssociation()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:442:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 8%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp: In member function 'FbcAnd* FbcAnd::createAnd()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:296:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp: In member function 'FbcOr* FbcAnd::createOr()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:333:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp: In member function 'GeneProductRef* FbcAnd::createGeneProductRef()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:370:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 8%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Association.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Association.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Association.cpp [ 8%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.h:101, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'FbcAnd* ListOfFbcAssociations::createAnd()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:939:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'FbcOr* ListOfFbcAssociations::createOr()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:976:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'GeneProductRef* ListOfFbcAssociations::createGeneProductRef()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1013:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'virtual SBase* ListOfFbcAssociations::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1109:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1117:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1125:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1133:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp: In member function 'FbcAnd* FbcAnd::createAnd()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:296:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp: In member function 'FbcOr* FbcAnd::createOr()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:333:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp: In member function 'GeneProductRef* FbcAnd::createGeneProductRef()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:370:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 8%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp [ 9%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp: In member function 'FbcAnd* FbcOr::createAnd()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:308:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp: In member function 'FbcOr* FbcOr::createOr()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:345:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp: In member function 'GeneProductRef* FbcOr::createGeneProductRef()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:382:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.h:101, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'FbcAnd* ListOfFbcAssociations::createAnd()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:939:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'FbcOr* ListOfFbcAssociations::createOr()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:976:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'GeneProductRef* ListOfFbcAssociations::createGeneProductRef()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1013:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'virtual SBase* ListOfFbcAssociations::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1109:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1117:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1125:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1133:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp: In member function 'FbcAnd* FbcOr::createAnd()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:308:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp: In member function 'FbcOr* FbcOr::createOr()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:345:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp: In member function 'GeneProductRef* FbcOr::createGeneProductRef()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:382:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 9%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxBound.h:122, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp: In member function 'virtual SBase* ListOfFluxBounds::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp:1174:7: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxBound.h:122, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp: In member function 'virtual SBase* ListOfFluxBounds::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp:1174:7: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 9%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.h:89, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp:37: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp: In member function 'FluxObjective* ListOfFluxObjectives::createFluxObjective()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp:1096:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp: In member function 'virtual SBase* ListOfFluxObjectives::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp:1192:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp [ 9%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.h:89, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp:37: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp: In member function 'FluxObjective* ListOfFluxObjectives::createFluxObjective()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp:1096:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp: In member function 'virtual SBase* ListOfFluxObjectives::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp:1192:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp:37: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp: In member function 'Association* GeneAssociation::createAssociation()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp:346:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp: In member function 'virtual SBase* ListOfGeneAssociations::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp:695:7: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp:37: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp: In member function 'Association* GeneAssociation::createAssociation()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp:346:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp: In member function 'virtual SBase* ListOfGeneAssociations::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp:695:7: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp [ 9%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.h:85, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp: In member function 'GeneProduct* ListOfGeneProducts::createGeneProduct()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp:1094:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp: In member function 'virtual SBase* ListOfGeneProducts::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp:1190:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:92, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual FbcAnd* GeneProductAssociation::createAnd()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:208:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual FbcOr* GeneProductAssociation::createOr()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:223:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual GeneProductRef* GeneProductAssociation::createGeneProductRef()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:238:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual SBase* GeneProductAssociation::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:923:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.h:85, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp: In member function 'GeneProduct* ListOfGeneProducts::createGeneProduct()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp:1094:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp: In member function 'virtual SBase* ListOfGeneProducts::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp:1190:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductRef.cpp [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Objective.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Objective.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp [ 9%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.h:130, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:37: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp: In member function 'FluxObjective* Objective::createFluxObjective()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:468:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp: In member function 'Objective* ListOfObjectives::createObjective()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:1370:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp: In member function 'virtual SBase* ListOfObjectives::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:1489:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/util/CobraToFbcConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/util/CobraToFbcConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util/CobraToFbcConverter.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:92, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual FbcAnd* GeneProductAssociation::createAnd()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:208:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual FbcOr* GeneProductAssociation::createOr()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:223:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual GeneProductRef* GeneProductAssociation::createGeneProductRef()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:238:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual SBase* GeneProductAssociation::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:923:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcToCobraConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcToCobraConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util/FbcToCobraConverter.cpp [ 10%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductRef.cpp [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcV1ToV2Converter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcV1ToV2Converter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util/FbcV1ToV2Converter.cpp [ 10%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Objective.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Objective.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.h:130, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:37: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp: In member function 'FluxObjective* Objective::createFluxObjective()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:468:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp: In member function 'Objective* ListOfObjectives::createObjective()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:1370:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp: In member function 'virtual SBase* ListOfObjectives::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:1489:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp [ 10%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/CobraToFbcConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/CobraToFbcConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util/CobraToFbcConverter.cpp [ 10%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcToCobraConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcToCobraConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util/FbcToCobraConverter.cpp [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python && /usr/bin/cmake -E rename pydoc.i pydoc-doxygen.i cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python && /usr/bin/cmake -E rename libsbml.py libsbml-doxygen.py cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python && /usr/bin/cmake -E rename pydoc-normal.i pydoc.i cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python && /usr/bin/swig -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/../swig/ -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/include -c++ -python -DLIBSBML_COMPILED_IN_SRC -DUSE_LIBXML -DUSE_BZ2 -DUSE_ZLIB -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_LAYOUT -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_SWIG_PYTHON_2_UNICODE -o /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python/libsbml_wrap.cpp /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/libsbml.i [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/FbcValidator.cpp [ 10%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcV1ToV2Converter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcV1ToV2Converter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util/FbcV1ToV2Converter.cpp [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp [ 10%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/../swig/std_set.i:65: Warning 314: 'del' is a python keyword, renaming to '_del' [ 10%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.cpp [ 11%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp [ 11%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/FbcValidator.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.h:48, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp: In member function 'Group* GroupsModelPlugin::createGroup()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp:229:5: note: in expansion of macro 'GROUPS_CREATE_NS' BUILDSTDERR: GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/sbml/Group.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/sbml/Group.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Group.cpp [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp [ 12%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Group.h:160, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Group.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Group.cpp: In member function 'Member* Group::createMember()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Group.cpp:461:5: note: in expansion of macro 'GROUPS_CREATE_NS' BUILDSTDERR: GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.h:68, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp: In member function 'Group* ListOfGroups::createGroup()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp:243:5: note: in expansion of macro 'GROUPS_CREATE_NS' BUILDSTDERR: GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp: In member function 'virtual SBase* ListOfGroups::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp:303:3: note: in expansion of macro 'GROUPS_CREATE_NS' BUILDSTDERR: GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/sbml/Member.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/sbml/Member.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Member.cpp [ 12%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.h:96, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp: In member function 'Member* ListOfMembers::createMember()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp:343:5: note: in expansion of macro 'GROUPS_CREATE_NS' BUILDSTDERR: GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp: In member function 'virtual SBase* ListOfMembers::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp:454:3: note: in expansion of macro 'GROUPS_CREATE_NS' BUILDSTDERR: GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 12%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp [ 12%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.cpp [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/GroupsValidator.cpp [ 12%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.h:48, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp: In member function 'Group* GroupsModelPlugin::createGroup()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp:229:5: note: in expansion of macro 'GROUPS_CREATE_NS' BUILDSTDERR: GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 12%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp [ 12%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Group.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Group.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Group.cpp [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Group.h:160, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Group.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Group.cpp: In member function 'Member* Group::createMember()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Group.cpp:461:5: note: in expansion of macro 'GROUPS_CREATE_NS' BUILDSTDERR: GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp [ 12%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.h:68, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp: In member function 'Group* ListOfGroups::createGroup()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp:243:5: note: in expansion of macro 'GROUPS_CREATE_NS' BUILDSTDERR: GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp: In member function 'virtual SBase* ListOfGroups::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp:303:3: note: in expansion of macro 'GROUPS_CREATE_NS' BUILDSTDERR: GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 12%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp [ 12%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Member.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Member.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Member.cpp [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.h:96, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp: In member function 'Member* ListOfMembers::createMember()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp:343:5: note: in expansion of macro 'GROUPS_CREATE_NS' BUILDSTDERR: GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp: In member function 'virtual SBase* ListOfMembers::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp:454:3: note: in expansion of macro 'GROUPS_CREATE_NS' BUILDSTDERR: GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 13%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.h:53, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp: In member function 'Layout* LayoutModelPlugin::createLayout()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp:476:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 14%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp [ 14%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/GroupsValidator.cpp [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp [ 14%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/BoundingBox.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/BoundingBox.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/BoundingBox.cpp [ 14%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/CompartmentGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/CompartmentGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/CompartmentGlyph.cpp [ 14%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/CubicBezier.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/CubicBezier.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/CubicBezier.cpp [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Curve.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Curve.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp [ 14%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.cpp [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Dimensions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Dimensions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Dimensions.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Point.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/LineSegment.h:54, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp: In member function 'LineSegment* Curve::createLineSegment()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:357:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp: In member function 'CubicBezier* Curve::createCubicBezier()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:372:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp: In member function 'virtual SBase* ListOfLineSegments::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:640:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp [ 14%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp [ 14%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Point.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/LineSegment.h:54, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.h:55, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:32: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp: In member function 'ReferenceGlyph* GeneralGlyph::createReferenceGlyph()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:647:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp: In member function 'virtual SBase* ListOfReferenceGlyphs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:1174:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.h:53, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp: In member function 'Layout* LayoutModelPlugin::createLayout()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp:476:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 14%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp [ 14%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/BoundingBox.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/BoundingBox.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/BoundingBox.cpp [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp [ 14%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/CompartmentGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/CompartmentGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/CompartmentGlyph.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Point.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/BoundingBox.h:48, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/util/LayoutUtilities.h:36, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp: In member function 'virtual SBase* ListOfGraphicalObjects::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp:1198:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns, this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Layout.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Layout.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/LineSegment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/LineSegment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/LineSegment.cpp [ 14%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/CubicBezier.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/CubicBezier.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/CubicBezier.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Dimensions.h:56, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.h:58, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'CompartmentGlyph* Layout::createCompartmentGlyph()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1378:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'SpeciesGlyph* Layout::createSpeciesGlyph()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1394:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'ReactionGlyph* Layout::createReactionGlyph()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1410:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'GeneralGlyph* Layout::createGeneralGlyph()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1425:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'TextGlyph* Layout::createTextGlyph()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1441:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'GraphicalObject* Layout::createAdditionalGraphicalObject()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1458:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfLayouts::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2039:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfCompartmentGlyphs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2211:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfSpeciesGlyphs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2363:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfReactionGlyphs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2512:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfTextGlyphs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2661:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Point.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Point.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Point.cpp [ 15%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Curve.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Curve.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Point.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/LineSegment.h:54, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp: In member function 'LineSegment* Curve::createLineSegment()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:357:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp: In member function 'CubicBezier* Curve::createCubicBezier()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:372:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp: In member function 'virtual SBase* ListOfLineSegments::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:640:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Point.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/LineSegment.h:54, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:32: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp: In member function 'SpeciesReferenceGlyph* ReactionGlyph::createSpeciesReferenceGlyph()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:494:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp: In member function 'virtual SBase* ListOfSpeciesReferenceGlyphs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:966:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 16%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Dimensions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Dimensions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Dimensions.cpp [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReferenceGlyph.cpp [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/SpeciesGlyph.cpp [ 16%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/TextGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/TextGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/TextGlyph.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Point.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/LineSegment.h:54, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.h:55, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:32: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp: In member function 'ReferenceGlyph* GeneralGlyph::createReferenceGlyph()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:647:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp: In member function 'virtual SBase* ListOfReferenceGlyphs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:1174:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 16%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp [ 16%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Layout.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Layout.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/util/LayoutAnnotation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/util/LayoutAnnotation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/util/LayoutAnnotation.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Point.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/BoundingBox.h:48, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/util/LayoutUtilities.h:36, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp: In member function 'virtual SBase* ListOfGraphicalObjects::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp:1198:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns, this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Dimensions.h:56, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.h:58, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'CompartmentGlyph* Layout::createCompartmentGlyph()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1378:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'SpeciesGlyph* Layout::createSpeciesGlyph()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1394:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'ReactionGlyph* Layout::createReactionGlyph()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1410:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'GeneralGlyph* Layout::createGeneralGlyph()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1425:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'TextGlyph* Layout::createTextGlyph()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1441:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'GraphicalObject* Layout::createAdditionalGraphicalObject()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1458:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfLayouts::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2039:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfCompartmentGlyphs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2211:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfSpeciesGlyphs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2363:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfReactionGlyphs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2512:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfTextGlyphs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2661:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/util/LayoutUtilities.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/util/LayoutUtilities.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/util/LayoutUtilities.cpp [ 16%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/LineSegment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/LineSegment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/LineSegment.cpp [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp [ 16%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Point.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Point.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Point.cpp [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp [ 16%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp [ 16%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReferenceGlyph.cpp [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/LayoutValidator.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Point.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/LineSegment.h:54, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:32: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp: In member function 'SpeciesReferenceGlyph* ReactionGlyph::createSpeciesReferenceGlyph()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:494:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp: In member function 'virtual SBase* ListOfSpeciesReferenceGlyphs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:966:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiASTPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiASTPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiASTPlugin.cpp [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.h:63, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp: In member function 'virtual SBase* MultiCompartmentPlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp:135:7: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp: In member function 'CompartmentReference* MultiCompartmentPlugin::createCompartmentReference()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp:580:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.h:46, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp: In member function 'virtual SBase* MultiListOfReactionsPlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp:131:8: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.h:49, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'virtual SBase* MultiModelPlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:127:7: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'MultiSpeciesType* MultiModelPlugin::createMultiSpeciesType()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:320:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'BindingSiteSpeciesType* MultiModelPlugin::createBindingSiteSpeciesType()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:347:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'IntraSpeciesReaction* MultiModelPlugin::createIntraSpeciesReaction()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:403:4: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 17%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/SpeciesGlyph.cpp [ 17%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.h:50, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp: In member function 'virtual SBase* MultiSimpleSpeciesReferencePlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp:124:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 17%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/TextGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/TextGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/TextGlyph.cpp [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.h:53, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'virtual SBase* MultiSpeciesPlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:132:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'OutwardBindingSite* MultiSpeciesPlugin::createOutwardBindingSite()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:479:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'SpeciesFeature* MultiSpeciesPlugin::createSpeciesFeature()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:632:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'SubListOfSpeciesFeatures* MultiSpeciesPlugin::createSubListOfSpeciesFeatures()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:734:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.h:50, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp: In member function 'virtual SBase* MultiSpeciesReferencePlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp:123:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp: In member function 'SpeciesTypeComponentMapInProduct* MultiSpeciesReferencePlugin::createSpeciesTypeComponentMapInProduct()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp:294:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 18%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/util/LayoutAnnotation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/util/LayoutAnnotation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/util/LayoutAnnotation.cpp [ 18%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/util/LayoutUtilities.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/util/LayoutUtilities.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/util/LayoutUtilities.cpp [ 18%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp [ 18%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/CompartmentReference.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/CompartmentReference.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp [ 18%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp [ 18%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp: In member function 'virtual SBase* ListOfCompartmentReferences::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp:738:7: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.h:71, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp: In member function 'virtual SBase* ListOfInSpeciesTypeBonds::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp:841:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 18%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp [ 18%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/IntraSpeciesReaction.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/IntraSpeciesReaction.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/IntraSpeciesReaction.cpp [ 18%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/MultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/MultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp [ 18%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/LayoutValidator.cpp [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/OutwardBindingSite.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/OutwardBindingSite.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.h:77, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'SpeciesFeatureType* MultiSpeciesType::createSpeciesFeatureType()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:449:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'SpeciesTypeInstance* MultiSpeciesType::createSpeciesTypeInstance()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:606:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'SpeciesTypeComponentIndex* MultiSpeciesType::createSpeciesTypeComponentIndex()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:763:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'InSpeciesTypeBond* MultiSpeciesType::createInSpeciesTypeBond()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:920:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'virtual SBase* MultiSpeciesType::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:1177:7: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'virtual SBase* ListOfMultiSpeciesTypes::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:1623:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:1630:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.h:138, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp: In member function 'virtual SBase* ListOfOutwardBindingSites::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp:841:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiASTPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiASTPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiASTPlugin.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp: In member function 'virtual SBase* ListOfPossibleSpeciesFeatureValues::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp:738:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeature.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeature.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.h:79, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp: In member function 'SpeciesFeatureValue* SpeciesFeature::createSpeciesFeatureValue()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:544:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp: In member function 'virtual SBase* SpeciesFeature::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:757:3: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp: In member function 'virtual SBase* ListOfSpeciesFeatures::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:1377:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:1384:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.h:63, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp: In member function 'virtual SBase* MultiCompartmentPlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp:135:7: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp: In member function 'CompartmentReference* MultiCompartmentPlugin::createCompartmentReference()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp:580:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeatureType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeatureType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.h:46, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp: In member function 'virtual SBase* MultiListOfReactionsPlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp:131:8: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.h:49, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'virtual SBase* MultiModelPlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:127:7: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'MultiSpeciesType* MultiModelPlugin::createMultiSpeciesType()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:320:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'BindingSiteSpeciesType* MultiModelPlugin::createBindingSiteSpeciesType()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:347:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'IntraSpeciesReaction* MultiModelPlugin::createIntraSpeciesReaction()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:403:4: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.h:72, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp: In member function 'PossibleSpeciesFeatureValue* SpeciesFeatureType::createPossibleSpeciesFeatureValue()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:427:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp: In member function 'virtual SBase* SpeciesFeatureType::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:618:3: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp: In member function 'virtual SBase* ListOfSpeciesFeatureTypes::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:999:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp [ 20%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp: In member function 'virtual SBase* ListOfSpeciesFeatureValues::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp:586:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.h:50, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp: In member function 'virtual SBase* MultiSimpleSpeciesReferencePlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp:124:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.h:70, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp: In member function 'virtual SBase* ListOfSpeciesTypeComponentIndexes::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp:860:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.h:70, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp: In member function 'virtual SBase* ListOfSpeciesTypeComponentMapInProducts::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp:929:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 20%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp [ 20%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.h:53, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'virtual SBase* MultiSpeciesPlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:132:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'OutwardBindingSite* MultiSpeciesPlugin::createOutwardBindingSite()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:479:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.h:50, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp: In member function 'virtual SBase* MultiSpeciesReferencePlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp:123:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'SpeciesFeature* MultiSpeciesPlugin::createSpeciesFeature()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:632:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp: In member function 'SpeciesTypeComponentMapInProduct* MultiSpeciesReferencePlugin::createSpeciesTypeComponentMapInProduct()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp:294:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'SubListOfSpeciesFeatures* MultiSpeciesPlugin::createSubListOfSpeciesFeatures()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:734:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.h:74, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp: In member function 'virtual SBase* ListOfSpeciesTypeInstances::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp:854:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp [ 20%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp [ 20%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/CompartmentReference.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/CompartmentReference.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.h:113, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp: In member function 'SpeciesFeature* SubListOfSpeciesFeatures::createSpeciesFeature()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp:270:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp: In member function 'virtual SBase* SubListOfSpeciesFeatures::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp:482:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp: In member function 'virtual SBase* ListOfCompartmentReferences::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp:738:7: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/MultiConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/MultiConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/MultiConsistencyValidator.cpp [ 20%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp [ 20%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/IntraSpeciesReaction.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/IntraSpeciesReaction.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/IntraSpeciesReaction.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python && /usr/bin/cmake -E rename pydoc.i pydoc-normal.i cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python && /usr/bin/cmake -DCUR_BIN_DIRECTORY="/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python" -DVERSION="5.17.0" -P /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/add_version.cmake BUILDSTDERR: Python: Add Version to generated file cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python && /usr/bin/cmake -DBIN_DIRECTORY="/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python" -DSRC_DIRECTORY="/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python" -P /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/patch-python.cmake -- Patching Python wrapper make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 20%] Built target binding_python_swig [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/MultiIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/MultiIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/MultiIdentifierConsistencyValidator.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.h:71, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp: In member function 'virtual SBase* ListOfInSpeciesTypeBonds::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp:841:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 20%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/MultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/MultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp [ 20%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/OutwardBindingSite.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/OutwardBindingSite.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp [ 20%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/MultiMathMLConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/MultiMathMLConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/MultiMathMLConsistencyValidator.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.h:77, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'SpeciesFeatureType* MultiSpeciesType::createSpeciesFeatureType()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:449:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'SpeciesTypeInstance* MultiSpeciesType::createSpeciesTypeInstance()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:606:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'SpeciesTypeComponentIndex* MultiSpeciesType::createSpeciesTypeComponentIndex()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:763:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'InSpeciesTypeBond* MultiSpeciesType::createInSpeciesTypeBond()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:920:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'virtual SBase* MultiSpeciesType::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:1177:7: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'virtual SBase* ListOfMultiSpeciesTypes::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:1623:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:1630:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.h:138, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp: In member function 'virtual SBase* ListOfOutwardBindingSites::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp:841:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp: In member function 'virtual SBase* ListOfPossibleSpeciesFeatureValues::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp:738:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 21%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/MultiValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/MultiValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/MultiValidator.cpp [ 21%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeature.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeature.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp [ 21%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeatureType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeatureType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp [ 21%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiConsistencyConstraints.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiConsistencyConstraints.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/MultiConsistencyConstraints.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.h:79, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp: In member function 'SpeciesFeatureValue* SpeciesFeature::createSpeciesFeatureValue()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:544:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp: In member function 'virtual SBase* SpeciesFeature::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:757:3: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.h:72, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp: In member function 'PossibleSpeciesFeatureValue* SpeciesFeatureType::createPossibleSpeciesFeatureValue()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:427:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp: In member function 'virtual SBase* SpeciesFeatureType::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:618:3: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp: In member function 'virtual SBase* ListOfSpeciesFeatures::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:1377:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:1384:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp: In member function 'virtual SBase* ListOfSpeciesFeatureTypes::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:999:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 21%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp [ 22%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp [ 22%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp: In member function 'virtual SBase* ListOfSpeciesFeatureValues::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp:586:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.h:70, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp: In member function 'virtual SBase* ListOfSpeciesTypeComponentIndexes::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp:860:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.h:70, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp: In member function 'virtual SBase* ListOfSpeciesTypeComponentMapInProducts::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp:929:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiIdBase.cpp.o [ 22%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiIdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/MultiIdBase.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp [ 22%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp [ 22%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/MultiConsistencyValidator.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.h:74, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp: In member function 'virtual SBase* ListOfSpeciesTypeInstances::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp:854:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiIdentifierConsistencyConstraints.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiIdentifierConsistencyConstraints.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/MultiIdentifierConsistencyConstraints.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.h:113, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp: In member function 'SpeciesFeature* SubListOfSpeciesFeatures::createSpeciesFeature()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp:270:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp: In member function 'virtual SBase* SubListOfSpeciesFeatures::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp:482:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/MultiIdentifierConsistencyValidator.cpp [ 22%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiMathMLConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiMathMLConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/MultiMathMLConsistencyValidator.cpp [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckRepresentationType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckRepresentationType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/MultiMathCiCheckRepresentationType.cpp [ 22%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/MultiValidator.cpp [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckSpeciesReference.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckSpeciesReference.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/MultiMathCiCheckSpeciesReference.cpp [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiMathMLConsistencyConstraints.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiMathMLConsistencyConstraints.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/MultiMathMLConsistencyConstraints.cpp [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueCRefIdsWithinCompartment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueCRefIdsWithinCompartment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueCRefIdsWithinCompartment.cpp [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueISTBIdsWithinMultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueISTBIdsWithinMultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueISTBIdsWithinMultiSpeciesType.cpp [ 22%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiConsistencyConstraints.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiConsistencyConstraints.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/MultiConsistencyConstraints.cpp [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueMultiComponentIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueMultiComponentIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueMultiComponentIds.cpp [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueMultiIdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueMultiIdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueMultiIdBase.cpp [ 22%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiIdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiIdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/MultiIdBase.cpp [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSFTIdsWithinMultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSFTIdsWithinMultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSFTIdsWithinMultiSpeciesType.cpp [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSLOSFIdsWithinSpecies.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSLOSFIdsWithinSpecies.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSLOSFIdsWithinSpecies.cpp [ 22%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiIdentifierConsistencyConstraints.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiIdentifierConsistencyConstraints.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/MultiIdentifierConsistencyConstraints.cpp [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSTCIdsWithinMultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSTCIdsWithinMultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSTCIdsWithinMultiSpeciesType.cpp [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSTIIdsWithinMultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSTIIdsWithinMultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSTIIdsWithinMultiSpeciesType.cpp [ 23%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckRepresentationType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckRepresentationType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/MultiMathCiCheckRepresentationType.cpp [ 24%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckSpeciesReference.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckSpeciesReference.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/MultiMathCiCheckSpeciesReference.cpp [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSpeciesFeatureIdsWithinSpecies.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSpeciesFeatureIdsWithinSpecies.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSpeciesFeatureIdsWithinSpecies.cpp [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.cpp [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp [ 24%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiMathMLConsistencyConstraints.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiMathMLConsistencyConstraints.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/MultiMathMLConsistencyConstraints.cpp [ 24%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueCRefIdsWithinCompartment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueCRefIdsWithinCompartment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueCRefIdsWithinCompartment.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.h:54, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp: In member function 'QualitativeSpecies* QualModelPlugin::createQualitativeSpecies()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp:830:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp: In member function 'Transition* QualModelPlugin::createTransition()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp:1012:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 24%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueISTBIdsWithinMultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueISTBIdsWithinMultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueISTBIdsWithinMultiSpeciesType.cpp [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp [ 24%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueMultiComponentIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueMultiComponentIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueMultiComponentIds.cpp [ 24%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueMultiIdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueMultiIdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueMultiIdBase.cpp [ 24%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSFTIdsWithinMultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSFTIdsWithinMultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSFTIdsWithinMultiSpeciesType.cpp [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/DefaultTerm.cpp [ 24%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSLOSFIdsWithinSpecies.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSLOSFIdsWithinSpecies.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSLOSFIdsWithinSpecies.cpp [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Input.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Input.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Input.cpp [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Output.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Output.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Output.cpp [ 24%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSTCIdsWithinMultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSTCIdsWithinMultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSTCIdsWithinMultiSpeciesType.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:58, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.h:68, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp: In member function 'DefaultTerm* ListOfFunctionTerms::createDefaultTerm()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp:1063:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp: In member function 'virtual SBase* ListOfFunctionTerms::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp:1120:3: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:58, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Input.h:98, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Input.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Input.cpp: In member function 'virtual SBase* ListOfInputs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Input.cpp:1333:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:58, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Output.h:89, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Output.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Output.cpp: In member function 'virtual SBase* ListOfOutputs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Output.cpp:1236:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 24%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSTIIdsWithinMultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSTIIdsWithinMultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSTIIdsWithinMultiSpeciesType.cpp [ 24%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSpeciesFeatureIdsWithinSpecies.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSpeciesFeatureIdsWithinSpecies.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSpeciesFeatureIdsWithinSpecies.cpp [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Transition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Transition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/QualConsistencyValidator.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:58, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.h:80, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp: In member function 'virtual SBase* ListOfQualitativeSpecies::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp:1329:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 25%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:58, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.h:82, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'Input* Transition::createInput()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:451:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'Output* Transition::createOutput()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:635:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'FunctionTerm* Transition::createFunctionTerm()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:793:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'virtual SBase* ListOfTransitions::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:1762:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/QualIdentifierConsistencyValidator.cpp [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/QualValidator.cpp [ 26%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp [ 26%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp [ 26%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/DefaultTerm.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.h:54, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp: In member function 'QualitativeSpecies* QualModelPlugin::createQualitativeSpecies()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp:830:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp: In member function 'Transition* QualModelPlugin::createTransition()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp:1012:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 26%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QSAssignedOnce.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QSAssignedOnce.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints/QSAssignedOnce.cpp [ 26%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QualCSymbolMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QualCSymbolMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints/QualCSymbolMathCheck.cpp [ 26%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp [ 26%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp [ 26%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Input.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Input.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Input.cpp [ 26%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Output.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Output.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Output.cpp [ 26%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:58, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.h:68, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp: In member function 'DefaultTerm* ListOfFunctionTerms::createDefaultTerm()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp:1063:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp: In member function 'virtual SBase* ListOfFunctionTerms::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp:1120:3: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:58, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Input.h:98, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Input.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Input.cpp: In member function 'virtual SBase* ListOfInputs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Input.cpp:1333:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:58, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Output.h:89, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Output.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Output.cpp: In member function 'virtual SBase* ListOfOutputs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Output.cpp:1236:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 26%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp [ 26%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp [ 26%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.cpp [ 26%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Transition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Transition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp [ 26%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/QualConsistencyValidator.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:58, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.h:82, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'Input* Transition::createInput()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:451:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'Output* Transition::createOutput()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:635:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'FunctionTerm* Transition::createFunctionTerm()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:793:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'virtual SBase* ListOfTransitions::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:1762:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:58, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.h:80, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp: In member function 'virtual SBase* ListOfQualitativeSpecies::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp:1329:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 26%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o [ 26%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/QualIdentifierConsistencyValidator.cpp [ 26%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp [ 26%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/QualValidator.cpp [ 26%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp [ 27%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QSAssignedOnce.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QSAssignedOnce.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints/QSAssignedOnce.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp:28: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp: In member function 'LocalRenderInformation* RenderLayoutPlugin::createLocalRenderInformation()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp:441:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp:28: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp: In member function 'GlobalRenderInformation* RenderListOfLayoutsPlugin::createGlobalRenderInformation()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp:704:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 28%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QualCSymbolMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QualCSymbolMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints/QualCSymbolMathCheck.cpp [ 28%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ColorDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ColorDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.cpp [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/DefaultValues.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/DefaultValues.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/DefaultValues.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.cpp:50: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.h: In copy constructor 'ColorDefinition::ColorDefinition(const ColorDefinition&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.h:95:15: warning: 'ColorDefinition::mValue' will be initialized after [-Wreorder] BUILDSTDERR: std::string mValue; BUILDSTDERR: ^~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.h:90:17: warning: 'unsigned char ColorDefinition::mRed' [-Wreorder] BUILDSTDERR: unsigned char mRed; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.cpp:272:1: warning: when initialized here [-Wreorder] BUILDSTDERR: ColorDefinition::ColorDefinition(const ColorDefinition& orig) BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Ellipse.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Ellipse.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Ellipse.cpp [ 28%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp [ 28%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp.o [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp [ 28%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.h:63, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp: In member function 'GlobalStyle* GlobalRenderInformation::createGlobalStyle()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp:360:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp: In member function 'virtual void GlobalRenderInformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp:837:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalStyle.cpp [ 28%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp [ 28%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp [ 28%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalStyle.cpp: In member function 'virtual void GlobalStyle::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalStyle.cpp:218:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ [ 28%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GradientBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GradientBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp:28: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp: In member function 'LocalRenderInformation* RenderLayoutPlugin::createLocalRenderInformation()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp:441:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 28%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ColorDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ColorDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp:28: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp: In member function 'GlobalRenderInformation* RenderListOfLayoutsPlugin::createGlobalRenderInformation()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp:704:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 28%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/DefaultValues.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/DefaultValues.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/DefaultValues.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.h:93, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp: In member function 'GradientStop* GradientBase::createGradientStop()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp:561:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp: In member function 'virtual SBase* GradientBase::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp:1251:22: warning: unused variable 'name' [-Wunused-variable] BUILDSTDERR: const std::string& name = stream.peek().getName(); BUILDSTDERR: ^~~~ [ 28%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Ellipse.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Ellipse.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Ellipse.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.cpp:50: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.h: In copy constructor 'ColorDefinition::ColorDefinition(const ColorDefinition&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.h:95:15: warning: 'ColorDefinition::mValue' will be initialized after [-Wreorder] BUILDSTDERR: std::string mValue; BUILDSTDERR: ^~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.h:90:17: warning: 'unsigned char ColorDefinition::mRed' [-Wreorder] BUILDSTDERR: unsigned char mRed; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.cpp:272:1: warning: when initialized here [-Wreorder] BUILDSTDERR: ColorDefinition::ColorDefinition(const ColorDefinition& orig) BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GradientStop.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GradientStop.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientStop.cpp [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp [ 29%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp [ 29%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalStyle.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp: In member function 'virtual void GraphicalPrimitive1D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp:1158:47: warning: 'numErrs' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: if (log && log->getNumErrors() == numErrs + 1 && BUILDSTDERR: ~~~~~~~~^~~ [ 29%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GradientBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GradientBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h: In constructor 'GraphicalPrimitive2D::GraphicalPrimitive2D(RenderPkgNamespaces*, const string&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:92:7: warning: 'GraphicalPrimitive2D::mFillRule' will be initialized after [-Wreorder] BUILDSTDERR: int mFillRule; BUILDSTDERR: ^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:91:15: warning: 'std::__cxx11::string GraphicalPrimitive2D::mFill' [-Wreorder] BUILDSTDERR: std::string mFill; BUILDSTDERR: ^~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp:135:1: warning: when initialized here [-Wreorder] BUILDSTDERR: GraphicalPrimitive2D::GraphicalPrimitive2D(RenderPkgNamespaces* renderns, const std::string& id) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.h:63, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp: In member function 'GlobalStyle* GlobalRenderInformation::createGlobalStyle()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp:360:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp: In member function 'virtual void GlobalRenderInformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp:837:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalStyle.cpp: In member function 'virtual void GlobalStyle::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalStyle.cpp:218:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ [ 29%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GradientStop.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GradientStop.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientStop.cpp [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Image.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Image.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Image.cpp [ 29%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.h:93, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp: In member function 'GradientStop* GradientBase::createGradientStop()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp:561:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp: In member function 'virtual SBase* GradientBase::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp:1251:22: warning: unused variable 'name' [-Wunused-variable] BUILDSTDERR: const std::string& name = stream.peek().getName(); BUILDSTDERR: ^~~~ [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/LineEnding.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/LineEnding.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp: In member function 'virtual void GraphicalPrimitive1D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp:1158:47: warning: 'numErrs' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: if (log && log->getNumErrors() == numErrs + 1 && BUILDSTDERR: ~~~~~~~~^~~ [ 30%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/LinearGradient.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/LinearGradient.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LinearGradient.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.h: In constructor 'LineEnding::LineEnding(const XMLNode&, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.h:88:16: warning: 'LineEnding::mBoundingBox' will be initialized after [-Wreorder] BUILDSTDERR: BoundingBox* mBoundingBox; BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.h:87:16: warning: 'RenderGroup* LineEnding::mGroup' [-Wreorder] BUILDSTDERR: RenderGroup* mGroup; BUILDSTDERR: ^~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:107:1: warning: when initialized here [-Wreorder] BUILDSTDERR: LineEnding::LineEnding(const XMLNode& node, unsigned int l2version) BUILDSTDERR: ^~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:55, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:62, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.h:68, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp: In member function 'RenderGroup* LineEnding::createGroup()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:524:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp: In member function 'BoundingBox* LineEnding::createBoundingBox()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:550:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp: In member function 'virtual SBase* LineEnding::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:1304:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:1306:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp: In member function 'virtual void LineEnding::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:1478:47: warning: 'numErrs' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: if (log && log->getNumErrors() == numErrs + 1 && BUILDSTDERR: ~~~~~~~~^~~ [ 30%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o [ 30%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp [ 30%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Image.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Image.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Image.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp: In member function 'ColorDefinition* ListOfColorDefinitions::createColorDefinition()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp:294:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 30%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LineEnding.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LineEnding.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp: In member function 'virtual SBase* ListOfColorDefinitions::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp:366:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h: In constructor 'GraphicalPrimitive2D::GraphicalPrimitive2D(RenderPkgNamespaces*, const string&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:92:7: warning: 'GraphicalPrimitive2D::mFillRule' will be initialized after [-Wreorder] BUILDSTDERR: int mFillRule; BUILDSTDERR: ^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:91:15: warning: 'std::__cxx11::string GraphicalPrimitive2D::mFill' [-Wreorder] BUILDSTDERR: std::string mFill; BUILDSTDERR: ^~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp:135:1: warning: when initialized here [-Wreorder] BUILDSTDERR: GraphicalPrimitive2D::GraphicalPrimitive2D(RenderPkgNamespaces* renderns, const std::string& id) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~ [ 30%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp [ 30%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp [ 30%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.h: In constructor 'LineEnding::LineEnding(const XMLNode&, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.h:88:16: warning: 'LineEnding::mBoundingBox' will be initialized after [-Wreorder] BUILDSTDERR: BoundingBox* mBoundingBox; BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.h:87:16: warning: 'RenderGroup* LineEnding::mGroup' [-Wreorder] BUILDSTDERR: RenderGroup* mGroup; BUILDSTDERR: ^~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:107:1: warning: when initialized here [-Wreorder] BUILDSTDERR: LineEnding::LineEnding(const XMLNode& node, unsigned int l2version) BUILDSTDERR: ^~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:55, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:62, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.h:68, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp: In member function 'RenderGroup* LineEnding::createGroup()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:524:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp: In member function 'BoundingBox* LineEnding::createBoundingBox()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:550:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp: In member function 'virtual SBase* LineEnding::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:1304:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:1306:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.h:66, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Image* ListOfDrawables::createImage()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:256:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Ellipse* ListOfDrawables::createEllipse()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:284:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Rectangle* ListOfDrawables::createRectangle()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:312:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Polygon* ListOfDrawables::createPolygon()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:340:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'RenderGroup* ListOfDrawables::createGroup()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:368:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'LineEnding* ListOfDrawables::createLineEnding()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:396:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Text* ListOfDrawables::createText()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:424:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'RenderCurve* ListOfDrawables::createCurve()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:452:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'virtual SBase* ListOfDrawables::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:512:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp: In member function 'virtual void LineEnding::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:1478:47: warning: 'numErrs' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: if (log && log->getNumErrors() == numErrs + 1 && BUILDSTDERR: ~~~~~~~~^~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.h:63, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp: In member function 'RenderCubicBezier* ListOfCurveElements::createCubicBezier()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:319:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp: In member function 'virtual SBase* ListOfCurveElements::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:406:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'DefaultValues* ListOfGlobalRenderInformation::createDefaultValues()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:420:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 30%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LinearGradient.cpp.o [ 30%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LinearGradient.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LinearGradient.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'GlobalRenderInformation* ListOfGlobalRenderInformation::createGlobalRenderInformation()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:600:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'virtual SBase* ListOfGlobalRenderInformation::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:835:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'virtual void ListOfGlobalRenderInformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:892:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ [ 30%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp [ 30%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp: In member function 'GlobalStyle* ListOfGlobalStyles::createGlobalStyle()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp:278:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp: In member function 'virtual SBase* ListOfGlobalStyles::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp:343:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp: In member function 'LinearGradient* ListOfGradientDefinitions::createLinearGradient()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:305:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp: In member function 'RadialGradient* ListOfGradientDefinitions::createRadialGradient()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:334:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp: In member function 'virtual SBase* ListOfGradientDefinitions::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:394:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp: In member function 'ColorDefinition* ListOfColorDefinitions::createColorDefinition()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp:294:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp: In member function 'virtual SBase* ListOfColorDefinitions::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp:366:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 30%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp [ 30%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.h:63, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp: In member function 'RenderCubicBezier* ListOfCurveElements::createCubicBezier()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:319:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp: In member function 'virtual SBase* ListOfCurveElements::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:406:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.h:66, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Image* ListOfDrawables::createImage()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:256:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Ellipse* ListOfDrawables::createEllipse()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:284:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Rectangle* ListOfDrawables::createRectangle()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:312:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Polygon* ListOfDrawables::createPolygon()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:340:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'RenderGroup* ListOfDrawables::createGroup()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:368:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'LineEnding* ListOfDrawables::createLineEnding()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:396:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Text* ListOfDrawables::createText()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:424:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'RenderCurve* ListOfDrawables::createCurve()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:452:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'virtual SBase* ListOfDrawables::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:512:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'DefaultValues* ListOfGlobalRenderInformation::createDefaultValues()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:420:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'GlobalRenderInformation* ListOfGlobalRenderInformation::createGlobalRenderInformation()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:600:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'virtual SBase* ListOfGlobalRenderInformation::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:835:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'virtual void ListOfGlobalRenderInformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:892:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp: In member function 'GlobalStyle* ListOfGlobalStyles::createGlobalStyle()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp:278:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp: In member function 'virtual SBase* ListOfGlobalStyles::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp:343:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp: In member function 'LinearGradient* ListOfGradientDefinitions::createLinearGradient()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:305:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp: In member function 'RadialGradient* ListOfGradientDefinitions::createRadialGradient()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:334:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp: In member function 'virtual SBase* ListOfGradientDefinitions::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:394:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.h:63, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp: In member function 'LineEnding* ListOfLineEndings::createLineEnding()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp:294:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp: In member function 'virtual SBase* ListOfLineEndings::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp:368:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.h:75, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp: In member function 'GradientStop* ListOfGradientStops::createGradientStop()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:299:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp: In member function 'virtual SBase* ListOfGradientStops::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:359:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.h:75, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp: In member function 'GradientStop* ListOfGradientStops::createGradientStop()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:299:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp: In member function 'virtual SBase* ListOfGradientStops::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:359:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.h:63, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp: In member function 'LineEnding* ListOfLineEndings::createLineEnding()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp:294:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp: In member function 'virtual SBase* ListOfLineEndings::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp:368:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.h:63, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'DefaultValues* ListOfLocalRenderInformation::createDefaultValues()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:417:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'LocalRenderInformation* ListOfLocalRenderInformation::createLocalRenderInformation()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:581:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'virtual SBase* ListOfLocalRenderInformation::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:785:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'virtual void ListOfLocalRenderInformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:842:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.h:62, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp: In member function 'LocalStyle* ListOfLocalStyles::createLocalStyle()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp:294:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp: In member function 'virtual SBase* ListOfLocalStyles::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp:359:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.h:63, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'DefaultValues* ListOfLocalRenderInformation::createDefaultValues()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:417:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'LocalRenderInformation* ListOfLocalRenderInformation::createLocalRenderInformation()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:581:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'virtual SBase* ListOfLocalRenderInformation::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:785:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'virtual void ListOfLocalRenderInformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:842:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LocalStyle.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LocalStyle.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalStyle.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.h:62, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp: In member function 'LocalStyle* ListOfLocalStyles::createLocalStyle()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp:294:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp: In member function 'virtual SBase* ListOfLocalStyles::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp:359:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp: In member function 'LocalStyle* LocalRenderInformation::createLocalStyle()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:334:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp: In member function 'LocalStyle* LocalRenderInformation::createStyle(const string&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:358:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp: In member function 'virtual void LocalRenderInformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:830:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalStyle.cpp: In member function 'virtual void LocalStyle::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalStyle.cpp:321:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Polygon.cpp.o [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o [ 32%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalStyle.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Polygon.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalStyle.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalStyle.cpp [ 32%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RadialGradient.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RadialGradient.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RadialGradient.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:55, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:62, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp: In constructor 'Polygon::Polygon(const XMLNode&, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:115:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp: In member function 'RenderPoint* Polygon::createPoint()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:416:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp: In member function 'RenderCubicBezier* Polygon::createCubicBezier()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:444:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp: In member function 'virtual void Polygon::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:829:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalStyle.cpp: In member function 'virtual void LocalStyle::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalStyle.cpp:321:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp: In member function 'LocalStyle* LocalRenderInformation::createLocalStyle()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:334:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp: In member function 'LocalStyle* LocalRenderInformation::createStyle(const string&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:358:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp: In member function 'virtual void LocalRenderInformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:830:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ [ 32%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Rectangle.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Rectangle.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Rectangle.cpp [ 32%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Polygon.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Polygon.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp [ 32%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RadialGradient.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RadialGradient.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RadialGradient.cpp [ 32%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Rectangle.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Rectangle.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Rectangle.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:55, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:62, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp: In constructor 'Polygon::Polygon(const XMLNode&, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:115:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp: In member function 'RenderPoint* Polygon::createPoint()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:416:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp: In member function 'RenderCubicBezier* Polygon::createCubicBezier()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:444:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp: In member function 'virtual void Polygon::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:829:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ [ 32%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RelAbsVector.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RelAbsVector.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RelAbsVector.cpp [ 32%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCubicBezier.cpp [ 32%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RelAbsVector.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RelAbsVector.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RelAbsVector.cpp [ 32%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCurve.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCurve.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp [ 32%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderGroup.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderGroup.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Dimensions.h:56, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.h:58, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/util/LayoutAnnotation.h:40, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp: In member function 'RenderPoint* RenderCurve::createPoint()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp:468:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp: In member function 'RenderCubicBezier* RenderCurve::createCubicBezier()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp:496:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h: In constructor 'RenderGroup::RenderGroup(unsigned int, unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:88:15: warning: 'RenderGroup::mEndHead' will be initialized after [-Wreorder] BUILDSTDERR: std::string mEndHead; BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:81:15: warning: 'std::__cxx11::string RenderGroup::mFontFamily' [-Wreorder] BUILDSTDERR: std::string mFontFamily; BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:76:1: warning: when initialized here [-Wreorder] BUILDSTDERR: RenderGroup::RenderGroup(unsigned int level, BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:86:7: warning: 'RenderGroup::mVTextAnchor' will be initialized after [-Wreorder] BUILDSTDERR: int mVTextAnchor; BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:82:16: warning: 'RelAbsVector RenderGroup::mFontSize' [-Wreorder] BUILDSTDERR: RelAbsVector mFontSize; BUILDSTDERR: ^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:76:1: warning: when initialized here [-Wreorder] BUILDSTDERR: RenderGroup::RenderGroup(unsigned int level, BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h: In constructor 'RenderGroup::RenderGroup(RenderPkgNamespaces*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:88:15: warning: 'RenderGroup::mEndHead' will be initialized after [-Wreorder] BUILDSTDERR: std::string mEndHead; BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:81:15: warning: 'std::__cxx11::string RenderGroup::mFontFamily' [-Wreorder] BUILDSTDERR: std::string mFontFamily; BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:99:1: warning: when initialized here [-Wreorder] BUILDSTDERR: RenderGroup::RenderGroup(RenderPkgNamespaces *renderns) BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:86:7: warning: 'RenderGroup::mVTextAnchor' will be initialized after [-Wreorder] BUILDSTDERR: int mVTextAnchor; BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:82:16: warning: 'RelAbsVector RenderGroup::mFontSize' [-Wreorder] BUILDSTDERR: RelAbsVector mFontSize; BUILDSTDERR: ^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:99:1: warning: when initialized here [-Wreorder] BUILDSTDERR: RenderGroup::RenderGroup(RenderPkgNamespaces *renderns) BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h: In copy constructor 'RenderGroup::RenderGroup(const RenderGroup&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:88:15: warning: 'RenderGroup::mEndHead' will be initialized after [-Wreorder] BUILDSTDERR: std::string mEndHead; BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:81:15: warning: 'std::__cxx11::string RenderGroup::mFontFamily' [-Wreorder] BUILDSTDERR: std::string mFontFamily; BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:260:1: warning: when initialized here [-Wreorder] BUILDSTDERR: RenderGroup::RenderGroup(const RenderGroup& orig) BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:86:7: warning: 'RenderGroup::mVTextAnchor' will be initialized after [-Wreorder] BUILDSTDERR: int mVTextAnchor; BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:82:16: warning: 'RelAbsVector RenderGroup::mFontSize' [-Wreorder] BUILDSTDERR: RelAbsVector mFontSize; BUILDSTDERR: ^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:260:1: warning: when initialized here [-Wreorder] BUILDSTDERR: RenderGroup::RenderGroup(const RenderGroup& orig) BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:55, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:62, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:67, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Image* RenderGroup::createImage()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1109:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Ellipse* RenderGroup::createEllipse()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1137:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Rectangle* RenderGroup::createRectangle()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1165:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Polygon* RenderGroup::createPolygon()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1193:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'RenderGroup* RenderGroup::createGroup()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1221:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'LineEnding* RenderGroup::createLineEnding()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1249:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Text* RenderGroup::createText()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1277:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'RenderCurve* RenderGroup::createCurve()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1305:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'void RenderGroup::importOldCurve(const XMLNode&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:2622:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 33%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCubicBezier.cpp [ 33%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCurve.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCurve.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Dimensions.h:56, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.h:58, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/util/LayoutAnnotation.h:40, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp: In member function 'RenderPoint* RenderCurve::createPoint()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp:468:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp: In member function 'RenderCubicBezier* RenderCurve::createCubicBezier()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp:496:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 33%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderGroup.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderGroup.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'ColorDefinition* RenderInformationBase::createColorDefinition()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:729:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'LinearGradient* RenderInformationBase::createLinearGradientDefinition()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:891:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'RadialGradient* RenderInformationBase::createRadialGradientDefinition()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:919:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'LineEnding* RenderInformationBase::createLineEnding()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:1081:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderPoint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderPoint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderPoint.cpp [ 33%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Style.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Style.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h: In constructor 'RenderGroup::RenderGroup(unsigned int, unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:88:15: warning: 'RenderGroup::mEndHead' will be initialized after [-Wreorder] BUILDSTDERR: std::string mEndHead; BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:81:15: warning: 'std::__cxx11::string RenderGroup::mFontFamily' [-Wreorder] BUILDSTDERR: std::string mFontFamily; BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:76:1: warning: when initialized here [-Wreorder] BUILDSTDERR: RenderGroup::RenderGroup(unsigned int level, BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:86:7: warning: 'RenderGroup::mVTextAnchor' will be initialized after [-Wreorder] BUILDSTDERR: int mVTextAnchor; BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:82:16: warning: 'RelAbsVector RenderGroup::mFontSize' [-Wreorder] BUILDSTDERR: RelAbsVector mFontSize; BUILDSTDERR: ^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:76:1: warning: when initialized here [-Wreorder] BUILDSTDERR: RenderGroup::RenderGroup(unsigned int level, BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h: In constructor 'RenderGroup::RenderGroup(RenderPkgNamespaces*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:88:15: warning: 'RenderGroup::mEndHead' will be initialized after [-Wreorder] BUILDSTDERR: std::string mEndHead; BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:81:15: warning: 'std::__cxx11::string RenderGroup::mFontFamily' [-Wreorder] BUILDSTDERR: std::string mFontFamily; BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:99:1: warning: when initialized here [-Wreorder] BUILDSTDERR: RenderGroup::RenderGroup(RenderPkgNamespaces *renderns) BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:86:7: warning: 'RenderGroup::mVTextAnchor' will be initialized after [-Wreorder] BUILDSTDERR: int mVTextAnchor; BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:82:16: warning: 'RelAbsVector RenderGroup::mFontSize' [-Wreorder] BUILDSTDERR: RelAbsVector mFontSize; BUILDSTDERR: ^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:99:1: warning: when initialized here [-Wreorder] BUILDSTDERR: RenderGroup::RenderGroup(RenderPkgNamespaces *renderns) BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h: In copy constructor 'RenderGroup::RenderGroup(const RenderGroup&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:88:15: warning: 'RenderGroup::mEndHead' will be initialized after [-Wreorder] BUILDSTDERR: std::string mEndHead; BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:81:15: warning: 'std::__cxx11::string RenderGroup::mFontFamily' [-Wreorder] BUILDSTDERR: std::string mFontFamily; BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:260:1: warning: when initialized here [-Wreorder] BUILDSTDERR: RenderGroup::RenderGroup(const RenderGroup& orig) BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:86:7: warning: 'RenderGroup::mVTextAnchor' will be initialized after [-Wreorder] BUILDSTDERR: int mVTextAnchor; BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:82:16: warning: 'RelAbsVector RenderGroup::mFontSize' [-Wreorder] BUILDSTDERR: RelAbsVector mFontSize; BUILDSTDERR: ^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:260:1: warning: when initialized here [-Wreorder] BUILDSTDERR: RenderGroup::RenderGroup(const RenderGroup& orig) BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:55, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:62, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:67, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Image* RenderGroup::createImage()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1109:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Ellipse* RenderGroup::createEllipse()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1137:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Rectangle* RenderGroup::createRectangle()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1165:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Polygon* RenderGroup::createPolygon()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1193:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'RenderGroup* RenderGroup::createGroup()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1221:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'LineEnding* RenderGroup::createLineEnding()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1249:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Text* RenderGroup::createText()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1277:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'RenderCurve* RenderGroup::createCurve()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1305:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'void RenderGroup::importOldCurve(const XMLNode&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:2622:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'ColorDefinition* RenderInformationBase::createColorDefinition()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:729:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'LinearGradient* RenderInformationBase::createLinearGradientDefinition()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:891:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'RadialGradient* RenderInformationBase::createRadialGradientDefinition()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:919:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'LineEnding* RenderInformationBase::createLineEnding()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:1081:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Text.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Text.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp: In member function 'RenderGroup* Style::createGroup()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp:588:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp: In member function 'virtual SBase* Style::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp:1260:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 34%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation.cpp:500:1: warning: "/*" within comment [-Wcomment] BUILDSTDERR: /* BUILDSTDERR: [ 34%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderPoint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderPoint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderPoint.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h: In copy constructor 'Text::Text(const Text&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h:116:7: warning: 'Text::mVTextAnchor' will be initialized after [-Wreorder] BUILDSTDERR: int mVTextAnchor; BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h:112:16: warning: 'RelAbsVector Text::mFontSize' [-Wreorder] BUILDSTDERR: RelAbsVector mFontSize; BUILDSTDERR: ^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.cpp:198:1: warning: when initialized here [-Wreorder] BUILDSTDERR: Text::Text(const Text& orig) BUILDSTDERR: ^~~~ [ 34%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Style.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Style.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation.cpp: In member function 'virtual void Transformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation.cpp:798:16: warning: unused variable 'pkgVersion' [-Wunused-variable] BUILDSTDERR: unsigned int pkgVersion = getPackageVersion(); BUILDSTDERR: ^~~~~~~~~~ [ 34%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Text.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Text.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.cpp [ 34%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation2D.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation2D.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation2D.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp: In member function 'RenderGroup* Style::createGroup()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp:588:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp: In member function 'virtual SBase* Style::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp:1260:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 34%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h: In copy constructor 'Text::Text(const Text&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h:116:7: warning: 'Text::mVTextAnchor' will be initialized after [-Wreorder] BUILDSTDERR: int mVTextAnchor; BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h:112:16: warning: 'RelAbsVector Text::mFontSize' [-Wreorder] BUILDSTDERR: RelAbsVector mFontSize; BUILDSTDERR: ^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.cpp:198:1: warning: when initialized here [-Wreorder] BUILDSTDERR: Text::Text(const Text& orig) BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation.cpp:500:1: warning: "/*" within comment [-Wcomment] BUILDSTDERR: /* BUILDSTDERR: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation2D.cpp: In member function 'virtual void Transformation2D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation2D.cpp:714:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ [ 34%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation2D.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation2D.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation2D.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation.cpp: In member function 'virtual void Transformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation.cpp:798:16: warning: unused variable 'pkgVersion' [-Wunused-variable] BUILDSTDERR: unsigned int pkgVersion = getPackageVersion(); BUILDSTDERR: ^~~~~~~~~~ [ 34%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/util/RenderLayoutConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/util/RenderLayoutConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util/RenderLayoutConverter.cpp [ 34%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/util/RenderUtilities.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/util/RenderUtilities.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util/RenderUtilities.cpp [ 34%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/RenderConsistencyValidator.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation2D.cpp: In member function 'virtual void Transformation2D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation2D.cpp:714:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ [ 34%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/util/RenderLayoutConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/util/RenderLayoutConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util/RenderLayoutConverter.cpp [ 34%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp [ 34%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/RenderValidator.cpp [ 34%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/util/RenderUtilities.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/util/RenderUtilities.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util/RenderUtilities.cpp [ 34%] Building CXX object src/CMakeFiles/sbml.dir/sbml/annotation/CVTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/annotation/CVTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/CVTerm.cpp [ 34%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/RenderConsistencyValidator.cpp [ 34%] Building CXX object src/CMakeFiles/sbml.dir/sbml/annotation/Date.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/annotation/Date.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/RenderValidator.cpp [ 35%] Building CXX object src/CMakeFiles/sbml.dir/sbml/annotation/ModelCreator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/annotation/ModelCreator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/ModelCreator.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp: In member function 'void Date::parseDateNumbersToString()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:459:25: warning: '%u' directive output may be truncated writing between 2 and 10 bytes into a region of size between 0 and 8 [-Wformat-truncation=] BUILDSTDERR: snprintf(cdate, 10, "%u-%u-", mYear, mMonth); BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:459:25: note: directive argument in the range [10, 4294967295] BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 6 and 23 bytes into a destination of size 10 BUILDSTDERR: return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:465:25: warning: 'T' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] BUILDSTDERR: snprintf(cdate, 10, "%uT", mDay); BUILDSTDERR: ^~~~~ BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 4 and 12 bytes into a destination of size 10 BUILDSTDERR: return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:471:25: warning: ':' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] BUILDSTDERR: snprintf(cdate, 10, "%u:", mHour); BUILDSTDERR: ^~~~~ BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 4 and 12 bytes into a destination of size 10 BUILDSTDERR: return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:477:25: warning: ':' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] BUILDSTDERR: snprintf(cdate, 10, "%u:", mMinute); BUILDSTDERR: ^~~~~ BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 4 and 12 bytes into a destination of size 10 BUILDSTDERR: return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:483:25: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] BUILDSTDERR: snprintf(cdate, 10, "%u", mSecond); BUILDSTDERR: ^~~~ BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 3 and 11 bytes into a destination of size 10 BUILDSTDERR: return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:502:27: warning: ':' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] BUILDSTDERR: snprintf(cdate, 10, "%u:", mHoursOffset); BUILDSTDERR: ^~~~~ BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 4 and 12 bytes into a destination of size 10 BUILDSTDERR: return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:508:27: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] BUILDSTDERR: snprintf(cdate, 10, "%u", mMinutesOffset); BUILDSTDERR: ^~~~ BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 3 and 11 bytes into a destination of size 10 BUILDSTDERR: return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 35%] Building CXX object src/CMakeFiles/sbml.dir/sbml/annotation/ModelHistory.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/annotation/ModelHistory.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/ModelHistory.cpp [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/annotation/CVTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/annotation/CVTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/CVTerm.cpp [ 35%] Building CXX object src/CMakeFiles/sbml.dir/sbml/annotation/RDFAnnotationParser.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/annotation/RDFAnnotationParser.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/RDFAnnotationParser.cpp [ 35%] Building CXX object src/CMakeFiles/sbml.dir/sbml/common/libsbml-version.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/common/libsbml-version.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/common/libsbml-version.cpp [ 36%] Building CXX object src/CMakeFiles/sbml.dir/sbml/common/operationReturnValues.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/common/operationReturnValues.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/common/operationReturnValues.cpp [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/annotation/Date.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/annotation/Date.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/annotation/ModelCreator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/annotation/ModelCreator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/ModelCreator.cpp [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/annotation/ModelHistory.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/annotation/ModelHistory.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/ModelHistory.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp: In member function 'void Date::parseDateNumbersToString()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:459:25: warning: '%u' directive output may be truncated writing between 2 and 10 bytes into a region of size between 0 and 8 [-Wformat-truncation=] BUILDSTDERR: snprintf(cdate, 10, "%u-%u-", mYear, mMonth); BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:459:25: note: directive argument in the range [10, 4294967295] BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 6 and 23 bytes into a destination of size 10 BUILDSTDERR: return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:465:25: warning: 'T' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] BUILDSTDERR: snprintf(cdate, 10, "%uT", mDay); BUILDSTDERR: ^~~~~ BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 4 and 12 bytes into a destination of size 10 BUILDSTDERR: return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:471:25: warning: ':' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] BUILDSTDERR: snprintf(cdate, 10, "%u:", mHour); BUILDSTDERR: ^~~~~ BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 4 and 12 bytes into a destination of size 10 BUILDSTDERR: return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:477:25: warning: ':' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] BUILDSTDERR: snprintf(cdate, 10, "%u:", mMinute); BUILDSTDERR: ^~~~~ BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 4 and 12 bytes into a destination of size 10 BUILDSTDERR: return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:483:25: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] BUILDSTDERR: snprintf(cdate, 10, "%u", mSecond); BUILDSTDERR: ^~~~ BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 3 and 11 bytes into a destination of size 10 BUILDSTDERR: return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:502:27: warning: ':' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] BUILDSTDERR: snprintf(cdate, 10, "%u:", mHoursOffset); BUILDSTDERR: ^~~~~ BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 4 and 12 bytes into a destination of size 10 BUILDSTDERR: return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:508:27: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] BUILDSTDERR: snprintf(cdate, 10, "%u", mMinutesOffset); BUILDSTDERR: ^~~~ BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 3 and 11 bytes into a destination of size 10 BUILDSTDERR: return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 36%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/ConversionOption.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/ConversionOption.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/ConversionOption.cpp [ 36%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/ConversionProperties.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/ConversionProperties.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/ConversionProperties.cpp [ 36%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/RegisterConverters.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/RegisterConverters.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/RegisterConverters.cpp [ 36%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLConverter.cpp [ 36%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLConverterRegistry.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLConverterRegistry.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLConverterRegistry.cpp [ 36%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLFunctionDefinitionConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLFunctionDefinitionConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLFunctionDefinitionConverter.cpp [ 36%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLIdConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLIdConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLIdConverter.cpp [ 36%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLInferUnitsConverter.cpp.o [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/annotation/RDFAnnotationParser.cpp.o [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/common/libsbml-version.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLInferUnitsConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLInferUnitsConverter.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/annotation/RDFAnnotationParser.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/RDFAnnotationParser.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/common/libsbml-version.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/common/libsbml-version.cpp [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/common/operationReturnValues.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/common/operationReturnValues.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/common/operationReturnValues.cpp [ 36%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLInitialAssignmentConverter.cpp [ 36%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLLevel1Version1Converter.cpp [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/ConversionOption.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/ConversionOption.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/ConversionOption.cpp [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/ConversionProperties.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/ConversionProperties.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/ConversionProperties.cpp [ 36%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLLevelVersionConverter.cpp [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/RegisterConverters.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/RegisterConverters.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/RegisterConverters.cpp [ 37%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLLocalParameterConverter.cpp [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLConverter.cpp [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLConverterRegistry.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLConverterRegistry.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLConverterRegistry.cpp [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLRateOfConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLRateOfConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLRateOfConverter.cpp [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLFunctionDefinitionConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLFunctionDefinitionConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLFunctionDefinitionConverter.cpp [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLReactionConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLReactionConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLReactionConverter.cpp [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLIdConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLIdConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLIdConverter.cpp [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLInferUnitsConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLInferUnitsConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLInferUnitsConverter.cpp [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLRuleConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLRuleConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLRuleConverter.cpp [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLStripPackageConverter.cpp [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLInitialAssignmentConverter.cpp [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLUnitsConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLUnitsConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLUnitsConverter.cpp [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLLevel1Version1Converter.cpp [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLLevelVersionConverter.cpp [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLLocalParameterConverter.cpp [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/ASTBasePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/ASTBasePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/ASTBasePlugin.cpp [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRateOfConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRateOfConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLRateOfConverter.cpp [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/ISBMLExtensionNamespaces.cpp [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLDocumentPlugin.cpp [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLDocumentPluginNotRequired.cpp [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLReactionConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLReactionConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLReactionConverter.cpp [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRuleConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRuleConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLRuleConverter.cpp [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLStripPackageConverter.cpp [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBMLExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.cpp [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLUnitsConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLUnitsConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLUnitsConverter.cpp [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/ASTBasePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/extension/ASTBasePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/ASTBasePlugin.cpp [ 39%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionException.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionException.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtensionException.cpp [ 40%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtensionNamespaces.cpp [ 40%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionRegistry.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionRegistry.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtensionRegistry.cpp [ 40%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBaseExtensionPoint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBaseExtensionPoint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBaseExtensionPoint.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtensionRegistry.cpp: In member function 'bool SBMLExtensionRegistry::setEnabled(const string&, bool)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtensionRegistry.cpp:350:56: warning: suggest parentheses around assignment used as truth value [-Wparentheses] BUILDSTDERR: return (sbmlext) ? sbmlext->mIsEnabled = isEnabled : false; BUILDSTDERR: ^~~~~ [ 40%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/ISBMLExtensionNamespaces.cpp [ 40%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLDocumentPlugin.cpp [ 40%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBasePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBasePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.cpp [ 40%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLDocumentPluginNotRequired.cpp [ 40%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBasePluginCreatorBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBasePluginCreatorBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePluginCreatorBase.cpp [ 40%] Building CXX object src/CMakeFiles/sbml.dir/sbml/AlgebraicRule.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/AlgebraicRule.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AlgebraicRule.cpp [ 40%] Building CXX object src/CMakeFiles/sbml.dir/sbml/AssignmentRule.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/AssignmentRule.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AssignmentRule.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AlgebraicRule.cpp: In function 'AlgebraicRule_t* AlgebraicRule_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AlgebraicRule.cpp:401:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AlgebraicRule.cpp: In function 'AlgebraicRule_t* AlgebraicRule_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AlgebraicRule.cpp:417:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 40%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Compartment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Compartment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Compartment.cpp [ 40%] Building CXX object src/CMakeFiles/sbml.dir/sbml/CompartmentType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/CompartmentType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/CompartmentType.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AssignmentRule.cpp: In function 'AssignmentRule_t* AssignmentRule_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AssignmentRule.cpp:525:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AssignmentRule.cpp: In function 'AssignmentRule_t* AssignmentRule_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AssignmentRule.cpp:541:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 40%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Constraint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Constraint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Constraint.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Compartment.cpp: In function 'Compartment_t* Compartment_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Compartment.cpp:2094:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Compartment.cpp: In function 'Compartment_t* Compartment_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Compartment.cpp:2110:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/CompartmentType.cpp: In function 'CompartmentType_t* CompartmentType_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/CompartmentType.cpp:876:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/CompartmentType.cpp: In function 'CompartmentType_t* CompartmentType_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/CompartmentType.cpp:892:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Constraint.cpp: In function 'Constraint_t* Constraint_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Constraint.cpp:1136:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Constraint.cpp: In function 'Constraint_t* Constraint_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Constraint.cpp:1152:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 40%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Delay.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Delay.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Delay.cpp [ 40%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Event.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Event.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Event.cpp [ 40%] Building CXX object src/CMakeFiles/sbml.dir/sbml/EventAssignment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/EventAssignment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/EventAssignment.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Delay.cpp: In function 'Delay_t* Delay_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Delay.cpp:884:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Delay.cpp: In function 'Delay_t* Delay_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Delay.cpp:900:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 40%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.cpp [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/ExpectedAttributes.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/ExpectedAttributes.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ExpectedAttributes.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Event.cpp: In function 'Event_t* Event_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Event.cpp:2370:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Event.cpp: In function 'Event_t* Event_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Event.cpp:2386:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/EventAssignment.cpp: In function 'EventAssignment_t* EventAssignment_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/EventAssignment.cpp:1289:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/EventAssignment.cpp: In function 'EventAssignment_t* EventAssignment_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/EventAssignment.cpp:1305:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/FunctionDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/FunctionDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/FunctionDefinition.cpp [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/InitialAssignment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/InitialAssignment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/InitialAssignment.cpp [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/KineticLaw.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/KineticLaw.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/KineticLaw.cpp [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionException.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionException.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtensionException.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/FunctionDefinition.cpp: In function 'FunctionDefinition_t* FunctionDefinition_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/FunctionDefinition.cpp:1361:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/FunctionDefinition.cpp: In function 'FunctionDefinition_t* FunctionDefinition_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/FunctionDefinition.cpp:1377:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/InitialAssignment.cpp: In function 'InitialAssignment_t* InitialAssignment_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/InitialAssignment.cpp:1271:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/InitialAssignment.cpp: In function 'InitialAssignment_t* InitialAssignment_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/InitialAssignment.cpp:1287:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/KineticLaw.cpp: In function 'KineticLaw_t* KineticLaw_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/KineticLaw.cpp:2063:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/KineticLaw.cpp: In function 'KineticLaw_t* KineticLaw_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/KineticLaw.cpp:2079:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtensionNamespaces.cpp [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/ListOf.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/ListOf.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ListOf.cpp [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionRegistry.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionRegistry.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtensionRegistry.cpp [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBaseExtensionPoint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/extension/SBaseExtensionPoint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBaseExtensionPoint.cpp [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/LocalParameter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/LocalParameter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/LocalParameter.cpp [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBasePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/extension/SBasePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtensionRegistry.cpp: In member function 'bool SBMLExtensionRegistry::setEnabled(const string&, bool)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtensionRegistry.cpp:350:56: warning: suggest parentheses around assignment used as truth value [-Wparentheses] BUILDSTDERR: return (sbmlext) ? sbmlext->mIsEnabled = isEnabled : false; BUILDSTDERR: ^~~~~ [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Model.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Model.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Model.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/LocalParameter.cpp: In function 'LocalParameter_t* LocalParameter_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/LocalParameter.cpp:828:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/LocalParameter.cpp: In function 'LocalParameter_t* LocalParameter_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/LocalParameter.cpp:844:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBasePluginCreatorBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/extension/SBasePluginCreatorBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePluginCreatorBase.cpp [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/ModifierSpeciesReference.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/ModifierSpeciesReference.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ModifierSpeciesReference.cpp [ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/AlgebraicRule.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/AlgebraicRule.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AlgebraicRule.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Model.cpp: In function 'Model_t* Model_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Model.cpp:7406:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Model.cpp: In function 'Model_t* Model_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Model.cpp:7422:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/AssignmentRule.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/AssignmentRule.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AssignmentRule.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ModifierSpeciesReference.cpp: In function 'ModifierSpeciesReference_t* ModifierSpeciesReference_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ModifierSpeciesReference.cpp:431:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ModifierSpeciesReference.cpp: In function 'ModifierSpeciesReference_t* ModifierSpeciesReference_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ModifierSpeciesReference.cpp:447:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AlgebraicRule.cpp: In function 'AlgebraicRule_t* AlgebraicRule_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AlgebraicRule.cpp:401:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AlgebraicRule.cpp: In function 'AlgebraicRule_t* AlgebraicRule_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AlgebraicRule.cpp:417:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 42%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Parameter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Parameter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Parameter.cpp [ 42%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Priority.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Priority.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Priority.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AssignmentRule.cpp: In function 'AssignmentRule_t* AssignmentRule_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AssignmentRule.cpp:525:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AssignmentRule.cpp: In function 'AssignmentRule_t* AssignmentRule_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AssignmentRule.cpp:541:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Parameter.cpp: In function 'Parameter_t* Parameter_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Parameter.cpp:1990:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Parameter.cpp: In function 'Parameter_t* Parameter_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Parameter.cpp:2006:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Priority.cpp: In function 'Priority_t* Priority_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Priority.cpp:732:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Priority.cpp: In function 'Priority_t* Priority_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Priority.cpp:748:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 42%] Building CXX object src/CMakeFiles/sbml.dir/sbml/RateRule.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/RateRule.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/RateRule.cpp [ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Compartment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Compartment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Compartment.cpp [ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/CompartmentType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/CompartmentType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/CompartmentType.cpp [ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Constraint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Constraint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Constraint.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/RateRule.cpp: In function 'RateRule_t* RateRule_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/RateRule.cpp:523:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/RateRule.cpp: In function 'RateRule_t* RateRule_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/RateRule.cpp:539:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 42%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Reaction.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Reaction.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Reaction.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/CompartmentType.cpp: In function 'CompartmentType_t* CompartmentType_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/CompartmentType.cpp:876:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/CompartmentType.cpp: In function 'CompartmentType_t* CompartmentType_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/CompartmentType.cpp:892:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Compartment.cpp: In function 'Compartment_t* Compartment_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Compartment.cpp:2094:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Compartment.cpp: In function 'Compartment_t* Compartment_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Compartment.cpp:2110:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Constraint.cpp: In function 'Constraint_t* Constraint_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Constraint.cpp:1136:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Constraint.cpp: In function 'Constraint_t* Constraint_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Constraint.cpp:1152:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Delay.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Delay.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Delay.cpp [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Rule.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Rule.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLConstructorException.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLConstructorException.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLConstructorException.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Reaction.cpp: In function 'Reaction_t* Reaction_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Reaction.cpp:2675:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Reaction.cpp: In function 'Reaction_t* Reaction_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Reaction.cpp:2691:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Delay.cpp: In function 'Delay_t* Delay_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Delay.cpp:884:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Delay.cpp: In function 'Delay_t* Delay_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Delay.cpp:900:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Event.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Event.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Event.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAlgebraic(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1908:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAlgebraicWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1924:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAssignment(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1940:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAssignmentWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1956:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createRate(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1972:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createRateWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1988:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/EventAssignment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/EventAssignment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/EventAssignment.cpp [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLConvert.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLConvert.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLConvert.cpp [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/ExpectedAttributes.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/ExpectedAttributes.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ExpectedAttributes.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Event.cpp: In function 'Event_t* Event_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Event.cpp:2370:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Event.cpp: In function 'Event_t* Event_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Event.cpp:2386:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/EventAssignment.cpp: In function 'EventAssignment_t* EventAssignment_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/EventAssignment.cpp:1289:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/EventAssignment.cpp: In function 'EventAssignment_t* EventAssignment_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/EventAssignment.cpp:1305:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLDocument.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLDocument.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLError.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLError.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLError.cpp [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/FunctionDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/FunctionDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/FunctionDefinition.cpp [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLErrorLog.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLErrorLog.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLErrorLog.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp: In function 'SBMLDocument_t* SBMLDocument_create()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp:2252:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp: In function 'SBMLDocument_t* SBMLDocument_createWithLevelAndVersion(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp:2268:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp: In function 'SBMLDocument_t* SBMLDocument_createWithSBMLNamespaces(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp:2284:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/FunctionDefinition.cpp: In function 'FunctionDefinition_t* FunctionDefinition_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/FunctionDefinition.cpp:1361:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/FunctionDefinition.cpp: In function 'FunctionDefinition_t* FunctionDefinition_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/FunctionDefinition.cpp:1377:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/InitialAssignment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/InitialAssignment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/InitialAssignment.cpp [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/KineticLaw.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/KineticLaw.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/KineticLaw.cpp [ 44%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/ListOf.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/ListOf.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ListOf.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/InitialAssignment.cpp: In function 'InitialAssignment_t* InitialAssignment_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/InitialAssignment.cpp:1271:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/InitialAssignment.cpp: In function 'InitialAssignment_t* InitialAssignment_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/InitialAssignment.cpp:1287:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 44%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLNamespaces.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/KineticLaw.cpp: In function 'KineticLaw_t* KineticLaw_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/KineticLaw.cpp:2063:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/KineticLaw.cpp: In function 'KineticLaw_t* KineticLaw_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/KineticLaw.cpp:2079:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 44%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/LocalParameter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/LocalParameter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/LocalParameter.cpp [ 44%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLReader.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLReader.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLReader.cpp [ 44%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLTransforms.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLTransforms.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLTransforms.cpp [ 44%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Model.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Model.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Model.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/LocalParameter.cpp: In function 'LocalParameter_t* LocalParameter_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/LocalParameter.cpp:828:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/LocalParameter.cpp: In function 'LocalParameter_t* LocalParameter_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/LocalParameter.cpp:844:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 44%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/ModifierSpeciesReference.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/ModifierSpeciesReference.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ModifierSpeciesReference.cpp [ 44%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Parameter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Parameter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Parameter.cpp [ 44%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLTypeCodes.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLTypeCodes.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLTypeCodes.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Model.cpp: In function 'Model_t* Model_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Model.cpp:7406:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Model.cpp: In function 'Model_t* Model_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Model.cpp:7422:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ModifierSpeciesReference.cpp: In function 'ModifierSpeciesReference_t* ModifierSpeciesReference_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ModifierSpeciesReference.cpp:431:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ModifierSpeciesReference.cpp: In function 'ModifierSpeciesReference_t* ModifierSpeciesReference_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ModifierSpeciesReference.cpp:447:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Parameter.cpp: In function 'Parameter_t* Parameter_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Parameter.cpp:1990:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Parameter.cpp: In function 'Parameter_t* Parameter_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Parameter.cpp:2006:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 44%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Priority.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Priority.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Priority.cpp [ 44%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLVisitor.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLVisitor.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLVisitor.cpp [ 44%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/RateRule.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/RateRule.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/RateRule.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Priority.cpp: In function 'Priority_t* Priority_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Priority.cpp:732:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Priority.cpp: In function 'Priority_t* Priority_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Priority.cpp:748:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 44%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLWriter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLWriter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLWriter.cpp [ 44%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBO.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBO.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBO.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/RateRule.cpp: In function 'RateRule_t* RateRule_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/RateRule.cpp:523:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/RateRule.cpp: In function 'RateRule_t* RateRule_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/RateRule.cpp:539:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 44%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Reaction.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Reaction.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Reaction.cpp [ 44%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Rule.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Rule.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBase.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Reaction.cpp: In function 'Reaction_t* Reaction_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Reaction.cpp:2675:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Reaction.cpp: In function 'Reaction_t* Reaction_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Reaction.cpp:2691:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAlgebraic(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1908:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAlgebraicWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1924:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAssignment(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1940:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAssignmentWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1956:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createRate(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1972:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createRateWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1988:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLConstructorException.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBMLConstructorException.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLConstructorException.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBase.cpp: In member function 'virtual void SBase::writeAttributes(XMLOutputStream&) const': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBase.cpp:5895:16: warning: unused variable 'pkgCoreVersion' [-Wunused-variable] BUILDSTDERR: unsigned int pkgCoreVersion = getPackageCoreVersion(); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLConvert.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBMLConvert.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLConvert.cpp [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SimpleSpeciesReference.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SimpleSpeciesReference.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SimpleSpeciesReference.cpp [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLDocument.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBMLDocument.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLError.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBMLError.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLError.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp: In function 'SBMLDocument_t* SBMLDocument_create()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp:2252:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp: In function 'SBMLDocument_t* SBMLDocument_createWithLevelAndVersion(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp:2268:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp: In function 'SBMLDocument_t* SBMLDocument_createWithSBMLNamespaces(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp:2284:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 46%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLErrorLog.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBMLErrorLog.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLErrorLog.cpp [ 46%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBMLNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLNamespaces.cpp [ 46%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLReader.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBMLReader.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLReader.cpp [ 46%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLTransforms.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBMLTransforms.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLTransforms.cpp [ 46%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLTypeCodes.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBMLTypeCodes.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLTypeCodes.cpp [ 46%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLVisitor.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBMLVisitor.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLVisitor.cpp [ 46%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLWriter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBMLWriter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLWriter.cpp [ 46%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBO.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBO.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBO.cpp [ 46%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBase.cpp [ 46%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Species.cpp.o [ 46%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SimpleSpeciesReference.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SimpleSpeciesReference.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SimpleSpeciesReference.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Species.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Species.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBase.cpp: In member function 'virtual void SBase::writeAttributes(XMLOutputStream&) const': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBase.cpp:5895:16: warning: unused variable 'pkgCoreVersion' [-Wunused-variable] BUILDSTDERR: unsigned int pkgCoreVersion = getPackageCoreVersion(); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Species.cpp: In function 'Species_t* Species_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Species.cpp:2657:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Species.cpp: In function 'Species_t* Species_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Species.cpp:2673:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 46%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Species.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Species.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Species.cpp [ 46%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SpeciesReference.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SpeciesReference.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Species.cpp: In function 'Species_t* Species_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Species.cpp:2657:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Species.cpp: In function 'Species_t* Species_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Species.cpp:2673:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 46%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesType.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp:1969:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp:1985:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_createModifier(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp:2001:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_createModifierWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp:2017:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 46%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SpeciesReference.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SpeciesReference.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesType.cpp: In function 'SpeciesType_t* SpeciesType_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesType.cpp:874:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesType.cpp: In function 'SpeciesType_t* SpeciesType_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesType.cpp:890:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesType.cpp [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/StoichiometryMath.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/StoichiometryMath.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/StoichiometryMath.cpp [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/StoichiometryMath.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/StoichiometryMath.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/StoichiometryMath.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp:1969:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp:1985:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_createModifier(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp:2001:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_createModifierWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp:2017:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesType.cpp: In function 'SpeciesType_t* SpeciesType_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesType.cpp:874:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesType.cpp: In function 'SpeciesType_t* SpeciesType_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesType.cpp:890:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/StoichiometryMath.cpp: In function 'StoichiometryMath_t* StoichiometryMath_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/StoichiometryMath.cpp:638:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/StoichiometryMath.cpp: In function 'StoichiometryMath_t* StoichiometryMath_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/StoichiometryMath.cpp:654:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SyntaxChecker.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SyntaxChecker.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SyntaxChecker.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/StoichiometryMath.cpp: In function 'StoichiometryMath_t* StoichiometryMath_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/StoichiometryMath.cpp:638:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/StoichiometryMath.cpp: In function 'StoichiometryMath_t* StoichiometryMath_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/StoichiometryMath.cpp:654:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SyntaxChecker.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SyntaxChecker.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SyntaxChecker.cpp [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Trigger.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Trigger.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Trigger.cpp [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Trigger.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Trigger.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Trigger.cpp [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Unit.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Unit.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Unit.cpp [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Unit.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Unit.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Unit.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Trigger.cpp: In function 'Trigger_t* Trigger_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Trigger.cpp:1008:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Trigger.cpp: In function 'Trigger_t* Trigger_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Trigger.cpp:1024:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Trigger.cpp: In function 'Trigger_t* Trigger_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Trigger.cpp:1008:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Trigger.cpp: In function 'Trigger_t* Trigger_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Trigger.cpp:1024:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/UnitDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/UnitDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitDefinition.cpp [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/UnitDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/UnitDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitDefinition.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Unit.cpp: In function 'Unit_t* Unit_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Unit.cpp:2695:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Unit.cpp: In function 'Unit_t* Unit_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Unit.cpp:2711:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Unit.cpp: In function 'Unit_t* Unit_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Unit.cpp:2695:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Unit.cpp: In function 'Unit_t* Unit_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Unit.cpp:2711:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitDefinition.cpp: In function 'UnitDefinition_t* UnitDefinition_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitDefinition.cpp:2420:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitDefinition.cpp: In function 'UnitDefinition_t* UnitDefinition_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitDefinition.cpp:2436:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitDefinition.cpp: In function 'UnitDefinition_t* UnitDefinition_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitDefinition.cpp:2420:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitDefinition.cpp: In function 'UnitDefinition_t* UnitDefinition_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitDefinition.cpp:2436:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 47%] Building C object src/CMakeFiles/sbml-static.dir/sbml/UnitKind.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/UnitKind.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitKind.c [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/units/FormulaUnitsData.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/units/FormulaUnitsData.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/FormulaUnitsData.cpp [ 47%] Building C object src/CMakeFiles/sbml.dir/sbml/UnitKind.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/UnitKind.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitKind.c [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/units/UnitFormulaFormatter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/units/UnitFormulaFormatter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/UnitFormulaFormatter.cpp [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/units/FormulaUnitsData.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/units/FormulaUnitsData.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/FormulaUnitsData.cpp [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/units/UnitKindList.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/units/UnitKindList.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/UnitKindList.cpp [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/ElementFilter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/util/ElementFilter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/ElementFilter.cpp [ 48%] Building CXX object src/CMakeFiles/sbml.dir/sbml/units/UnitFormulaFormatter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/units/UnitFormulaFormatter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/UnitFormulaFormatter.cpp [ 48%] Building CXX object src/CMakeFiles/sbml.dir/sbml/units/UnitKindList.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/units/UnitKindList.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/UnitKindList.cpp [ 48%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/ElementFilter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/ElementFilter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/ElementFilter.cpp [ 48%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/IdFilter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/util/IdFilter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/IdFilter.cpp [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/IdList.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/util/IdList.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/IdList.cpp [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/IdentifierTransformer.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/util/IdentifierTransformer.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/IdentifierTransformer.cpp [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/IdFilter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/IdFilter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/IdFilter.cpp [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/List.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/util/List.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/List.cpp [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/MetaIdFilter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/util/MetaIdFilter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/MetaIdFilter.cpp [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/PrefixTransformer.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/util/PrefixTransformer.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/PrefixTransformer.cpp [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/IdList.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/IdList.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/IdList.cpp [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/IdentifierTransformer.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/IdentifierTransformer.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/IdentifierTransformer.cpp [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/List.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/List.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/List.cpp [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/MetaIdFilter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/MetaIdFilter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/MetaIdFilter.cpp [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/PrefixTransformer.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/PrefixTransformer.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/PrefixTransformer.cpp [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/util.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/util/util.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/util.cpp [ 49%] Building C object src/CMakeFiles/sbml-static.dir/sbml/util/Stack.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/util/Stack.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/Stack.c [ 49%] Building C object src/CMakeFiles/sbml-static.dir/sbml/util/StringBuffer.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/util/StringBuffer.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/StringBuffer.c [ 49%] Building C object src/CMakeFiles/sbml-static.dir/sbml/util/memory.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/util/memory.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/memory.c [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/util.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/util.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/util.cpp [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/ConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/ConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/ConsistencyValidator.cpp [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/IdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/IdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/IdentifierConsistencyValidator.cpp [ 49%] Building C object src/CMakeFiles/sbml.dir/sbml/util/Stack.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/Stack.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/Stack.c [ 49%] Building C object src/CMakeFiles/sbml.dir/sbml/util/StringBuffer.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/StringBuffer.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/StringBuffer.c [ 50%] Building C object src/CMakeFiles/sbml.dir/sbml/util/memory.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/memory.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/memory.c [ 50%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/ConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/ConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/ConsistencyValidator.cpp [ 50%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/IdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/IdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/IdentifierConsistencyValidator.cpp [ 50%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/InternalConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/InternalConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/InternalConsistencyValidator.cpp [ 50%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/L1CompatibilityValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/L1CompatibilityValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/L1CompatibilityValidator.cpp [ 50%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/InternalConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/InternalConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/InternalConsistencyValidator.cpp [ 50%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/L1CompatibilityValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/L1CompatibilityValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/L1CompatibilityValidator.cpp [ 50%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/L2v2CompatibilityValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/L2v2CompatibilityValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/L2v2CompatibilityValidator.cpp [ 50%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/L2v1CompatibilityValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/L2v1CompatibilityValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/L2v1CompatibilityValidator.cpp [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/L2v1CompatibilityValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/L2v1CompatibilityValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/L2v1CompatibilityValidator.cpp [ 51%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/L2v3CompatibilityValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/L2v3CompatibilityValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/L2v3CompatibilityValidator.cpp [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/L2v2CompatibilityValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/L2v2CompatibilityValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/L2v2CompatibilityValidator.cpp [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/L2v3CompatibilityValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/L2v3CompatibilityValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/L2v3CompatibilityValidator.cpp [ 51%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/L2v4CompatibilityValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/L2v4CompatibilityValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/L2v4CompatibilityValidator.cpp [ 51%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/L3v1CompatibilityValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/L3v1CompatibilityValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/L3v1CompatibilityValidator.cpp [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/L2v4CompatibilityValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/L2v4CompatibilityValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/L2v4CompatibilityValidator.cpp [ 51%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/L3v2CompatibilityValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/L3v2CompatibilityValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/L3v2CompatibilityValidator.cpp [ 51%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/MathMLConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/MathMLConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/MathMLConsistencyValidator.cpp [ 51%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/ModelingPracticeValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/ModelingPracticeValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/ModelingPracticeValidator.cpp [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/L3v1CompatibilityValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/L3v1CompatibilityValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/L3v1CompatibilityValidator.cpp [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/L3v2CompatibilityValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/L3v2CompatibilityValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/L3v2CompatibilityValidator.cpp [ 52%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/OverdeterminedValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/OverdeterminedValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/OverdeterminedValidator.cpp [ 52%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/MathMLConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/MathMLConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/MathMLConsistencyValidator.cpp [ 52%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/SBMLExternalValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/SBMLExternalValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/SBMLExternalValidator.cpp [ 52%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/SBMLInternalValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/SBMLInternalValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/SBMLInternalValidator.cpp [ 52%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/ModelingPracticeValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/ModelingPracticeValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/ModelingPracticeValidator.cpp [ 52%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/OverdeterminedValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/OverdeterminedValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/OverdeterminedValidator.cpp [ 52%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/SBMLValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/SBMLValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/SBMLValidator.cpp [ 52%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/SBMLExternalValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/SBMLExternalValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/SBMLExternalValidator.cpp [ 52%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/SBMLInternalValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/SBMLInternalValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/SBMLInternalValidator.cpp [ 52%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/SBMLValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/SBMLValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/SBMLValidator.cpp [ 52%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/SBOConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/SBOConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/SBOConsistencyValidator.cpp [ 53%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/SBOConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/SBOConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/SBOConsistencyValidator.cpp [ 53%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/StrictUnitConsistencyValidator.cpp [ 53%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/StrictUnitConsistencyValidator.cpp [ 53%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/UnitConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/UnitConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/UnitConsistencyValidator.cpp [ 53%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/VConstraint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/VConstraint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/VConstraint.cpp [ 53%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/VConstraint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/VConstraint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/VConstraint.cpp [ 53%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/UnitConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/UnitConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/UnitConsistencyValidator.cpp [ 53%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/Validator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/Validator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/Validator.cpp [ 53%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/Validator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/Validator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/Validator.cpp [ 53%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/ArgumentsUnitsCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/ArgumentsUnitsCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/ArgumentsUnitsCheck.cpp [ 53%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ArgumentsUnitsCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ArgumentsUnitsCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/ArgumentsUnitsCheck.cpp [ 53%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp [ 53%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/AssignmentCycles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/AssignmentCycles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/AssignmentCycles.cpp [ 53%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp [ 53%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/AssignmentCycles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/AssignmentCycles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/AssignmentCycles.cpp [ 54%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/AssignmentRuleOrdering.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/AssignmentRuleOrdering.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/AssignmentRuleOrdering.cpp [ 54%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/CiElementMathCheck.cpp.o [ 54%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/CiElementMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/CiElementMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/CiElementMathCheck.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/CiElementMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/CiElementMathCheck.cpp [ 54%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/AssignmentRuleOrdering.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/AssignmentRuleOrdering.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/AssignmentRuleOrdering.cpp [ 54%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/CiElementNot0DComp.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/CiElementNot0DComp.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/CiElementNot0DComp.cpp [ 54%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/CiElementNot0DComp.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/CiElementNot0DComp.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/CiElementNot0DComp.cpp [ 54%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/CompartmentOutsideCycles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/CompartmentOutsideCycles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/CompartmentOutsideCycles.cpp [ 54%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/CompartmentOutsideCycles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/CompartmentOutsideCycles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/CompartmentOutsideCycles.cpp [ 54%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp [ 54%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp [ 55%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/EqualityArgsMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/EqualityArgsMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/EqualityArgsMathCheck.cpp [ 55%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/EqualityArgsMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/EqualityArgsMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/EqualityArgsMathCheck.cpp [ 55%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/ExponentUnitsCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/ExponentUnitsCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/ExponentUnitsCheck.cpp [ 55%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ExponentUnitsCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ExponentUnitsCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/ExponentUnitsCheck.cpp [ 55%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionApplyMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionApplyMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/FunctionApplyMathCheck.cpp [ 55%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionApplyMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionApplyMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/FunctionApplyMathCheck.cpp [ 55%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionDefinitionRecursion.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionDefinitionRecursion.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/FunctionDefinitionRecursion.cpp [ 55%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionDefinitionVars.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionDefinitionVars.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/FunctionDefinitionVars.cpp [ 55%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionDefinitionRecursion.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionDefinitionRecursion.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/FunctionDefinitionRecursion.cpp [ 55%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionDefinitionVars.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionDefinitionVars.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/FunctionDefinitionVars.cpp [ 55%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp [ 55%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp [ 55%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionReferredToExists.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionReferredToExists.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/FunctionReferredToExists.cpp [ 55%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/IdBase.cpp [ 55%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionReferredToExists.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionReferredToExists.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/FunctionReferredToExists.cpp [ 56%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/IdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/IdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/IdBase.cpp [ 56%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/IdNameNewOnSBase.cpp [ 56%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawUnitsCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawUnitsCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/KineticLawUnitsCheck.cpp [ 56%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/IdNameNewOnSBase.cpp [ 56%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/KineticLawUnitsCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/KineticLawUnitsCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/KineticLawUnitsCheck.cpp [ 56%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawVars.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawVars.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/KineticLawVars.cpp [ 56%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/LambdaMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/LambdaMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/LambdaMathCheck.cpp [ 56%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/KineticLawVars.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/KineticLawVars.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/KineticLawVars.cpp [ 57%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/LocalParameterMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/LocalParameterMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/LocalParameterMathCheck.cpp [ 57%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/LambdaMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/LambdaMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/LambdaMathCheck.cpp [ 57%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/LocalParameterMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/LocalParameterMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/LocalParameterMathCheck.cpp [ 57%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp [ 57%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp [ 57%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/LogicalArgsMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/LogicalArgsMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/LogicalArgsMathCheck.cpp [ 57%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/MathMLBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/MathMLBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/MathMLBase.cpp [ 57%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/ModelUnitsDangling.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/ModelUnitsDangling.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/ModelUnitsDangling.cpp [ 57%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/MathMLBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/MathMLBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/MathMLBase.cpp [ 57%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/LogicalArgsMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/LogicalArgsMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/LogicalArgsMathCheck.cpp [ 57%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ModelUnitsDangling.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ModelUnitsDangling.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/ModelUnitsDangling.cpp [ 57%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/NumberArgsMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/NumberArgsMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/NumberArgsMathCheck.cpp [ 57%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumberArgsMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumberArgsMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/NumberArgsMathCheck.cpp [ 57%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumericArgsMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumericArgsMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/NumericArgsMathCheck.cpp [ 57%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumericReturnMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumericReturnMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/NumericReturnMathCheck.cpp [ 57%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/NumericArgsMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/NumericArgsMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/NumericArgsMathCheck.cpp [ 57%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/OverDeterminedCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/OverDeterminedCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/OverDeterminedCheck.cpp [ 57%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/NumericReturnMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/NumericReturnMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/NumericReturnMathCheck.cpp [ 58%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/OverDeterminedCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/OverDeterminedCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/OverDeterminedCheck.cpp [ 58%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/PieceBooleanMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/PieceBooleanMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/PieceBooleanMathCheck.cpp [ 58%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/PieceBooleanMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/PieceBooleanMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/PieceBooleanMathCheck.cpp [ 58%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/PiecewiseValueMathCheck.cpp.o [ 58%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/PowerUnitsCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/PiecewiseValueMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/PiecewiseValueMathCheck.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/PowerUnitsCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/PowerUnitsCheck.cpp [ 58%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/PiecewiseValueMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/PiecewiseValueMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/PiecewiseValueMathCheck.cpp [ 58%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/PowerUnitsCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/PowerUnitsCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/PowerUnitsCheck.cpp [ 59%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp [ 59%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp [ 59%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp [ 59%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCycles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCycles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/RateOfCycles.cpp [ 59%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ReportEmptyListOf.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ReportEmptyListOf.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/ReportEmptyListOf.cpp [ 59%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/SpeciesReactionOrRule.cpp [ 59%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/StoichiometryMathVars.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/StoichiometryMathVars.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/StoichiometryMathVars.cpp [ 59%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueIdBase.cpp [ 59%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp [ 59%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp [ 59%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp.o [ 59%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp [ 59%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsInModel.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsInModel.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueIdsInModel.cpp [ 59%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueMetaId.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueMetaId.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueMetaId.cpp [ 59%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp [ 59%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp [ 60%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCycles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCycles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/RateOfCycles.cpp [ 60%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/ReportEmptyListOf.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/ReportEmptyListOf.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/ReportEmptyListOf.cpp [ 60%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/SpeciesReactionOrRule.cpp [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInRules.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInRules.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueVarsInRules.cpp [ 60%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/StoichiometryMathVars.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/StoichiometryMathVars.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/StoichiometryMathVars.cpp [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UnitsBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UnitsBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UnitsBase.cpp [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/ValidCnUnitsValue.cpp [ 60%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueIdBase.cpp [ 61%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp [ 61%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTBase.cpp [ 61%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTBinaryFunctionNode.cpp.o [ 61%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTBinaryFunctionNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTBinaryFunctionNode.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp [ 61%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsInModel.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsInModel.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueIdsInModel.cpp [ 61%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueMetaId.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueMetaId.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueMetaId.cpp [ 61%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbol.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbol.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCSymbol.cpp [ 61%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolAvogadroNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolAvogadroNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCSymbolAvogadroNode.cpp [ 61%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp.o [ 61%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp [ 61%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolDelayNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolDelayNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCSymbolDelayNode.cpp [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolRateOfNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolRateOfNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCSymbolRateOfNode.cpp [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolTimeNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolTimeNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCSymbolTimeNode.cpp [ 62%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCiFunctionNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCiFunctionNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCiFunctionNode.cpp [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCiNumberNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCiNumberNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCiNumberNode.cpp [ 62%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCnBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCnBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCnBase.cpp [ 62%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp [ 62%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInRules.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInRules.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueVarsInRules.cpp [ 62%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UnitsBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UnitsBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UnitsBase.cpp [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCnExponentialNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCnExponentialNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCnExponentialNode.cpp [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCnIntegerNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCnIntegerNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCnIntegerNode.cpp [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCnRationalNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCnRationalNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCnRationalNode.cpp [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCnRealNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCnRealNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCnRealNode.cpp [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTConstantNumberNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTConstantNumberNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTConstantNumberNode.cpp [ 62%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/ValidCnUnitsValue.cpp [ 63%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTBase.cpp [ 63%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTBinaryFunctionNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTBinaryFunctionNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTBinaryFunctionNode.cpp [ 63%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTFunction.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTFunction.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTFunction.cpp [ 63%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTFunctionBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTFunctionBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTFunctionBase.cpp [ 63%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCSymbol.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCSymbol.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCSymbol.cpp [ 63%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCSymbolAvogadroNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCSymbolAvogadroNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCSymbolAvogadroNode.cpp [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTLambdaFunctionNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTLambdaFunctionNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTLambdaFunctionNode.cpp [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTNaryFunctionNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTNaryFunctionNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTNaryFunctionNode.cpp [ 64%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCSymbolDelayNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCSymbolDelayNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCSymbolDelayNode.cpp [ 64%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCSymbolRateOfNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCSymbolRateOfNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCSymbolRateOfNode.cpp [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTNode.cpp [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTNumber.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTNumber.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTNumber.cpp [ 64%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCSymbolTimeNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCSymbolTimeNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCSymbolTimeNode.cpp [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTPiecewiseFunctionNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTPiecewiseFunctionNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTPiecewiseFunctionNode.cpp [ 64%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCiFunctionNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCiFunctionNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCiFunctionNode.cpp [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTQualifierNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTQualifierNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTQualifierNode.cpp [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTSemanticsNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTSemanticsNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTSemanticsNode.cpp [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTTypes.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTTypes.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTTypes.cpp [ 64%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCiNumberNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCiNumberNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCiNumberNode.cpp [ 64%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCnBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCnBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCnBase.cpp [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTUnaryFunctionNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTUnaryFunctionNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTUnaryFunctionNode.cpp [ 64%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCnExponentialNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCnExponentialNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCnExponentialNode.cpp [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/L3Parser.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/L3Parser.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/L3Parser.cpp [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/L3ParserSettings.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/L3ParserSettings.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/L3ParserSettings.cpp [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/MathML.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/MathML.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/MathML.cpp [ 64%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCnIntegerNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCnIntegerNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCnIntegerNode.cpp [ 64%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCnRationalNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCnRationalNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCnRationalNode.cpp [ 64%] Building C object src/CMakeFiles/sbml-static.dir/sbml/math/FormulaFormatter.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/FormulaFormatter.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/FormulaFormatter.c [ 65%] Building C object src/CMakeFiles/sbml-static.dir/sbml/math/FormulaParser.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/FormulaParser.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/FormulaParser.c [ 65%] Building C object src/CMakeFiles/sbml-static.dir/sbml/math/FormulaTokenizer.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/FormulaTokenizer.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/FormulaTokenizer.c [ 66%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCnRealNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCnRealNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCnRealNode.cpp [ 66%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTConstantNumberNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTConstantNumberNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTConstantNumberNode.cpp [ 66%] Building C object src/CMakeFiles/sbml-static.dir/sbml/math/L3FormulaFormatter.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/L3FormulaFormatter.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/L3FormulaFormatter.c [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/compress/CompressCommon.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/compress/CompressCommon.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/CompressCommon.cpp [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/compress/InputDecompressor.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/compress/InputDecompressor.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/InputDecompressor.cpp [ 66%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTFunction.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTFunction.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTFunction.cpp [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/compress/OutputCompressor.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/compress/OutputCompressor.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/OutputCompressor.cpp [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/compress/bzfstream.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/compress/bzfstream.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/bzfstream.cpp [ 66%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTFunctionBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTFunctionBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTFunctionBase.cpp [ 66%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTLambdaFunctionNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTLambdaFunctionNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTLambdaFunctionNode.cpp [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/compress/zfstream.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/compress/zfstream.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/zfstream.cpp [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/compress/zipfstream.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/compress/zipfstream.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/zipfstream.cpp [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLAttributes.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLAttributes.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.cpp [ 66%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTNaryFunctionNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTNaryFunctionNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTNaryFunctionNode.cpp [ 66%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTNode.cpp [ 66%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTNumber.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTNumber.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTNumber.cpp [ 66%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTPiecewiseFunctionNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTPiecewiseFunctionNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTPiecewiseFunctionNode.cpp [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLBuffer.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLBuffer.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLBuffer.cpp [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLConstructorException.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLConstructorException.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLConstructorException.cpp [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLError.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLError.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLError.cpp [ 67%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTQualifierNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTQualifierNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTQualifierNode.cpp [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLErrorLog.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLErrorLog.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLErrorLog.cpp [ 67%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTSemanticsNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTSemanticsNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTSemanticsNode.cpp [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLLogOverride.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLLogOverride.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLLogOverride.cpp [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLFileBuffer.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLFileBuffer.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLFileBuffer.cpp [ 67%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTTypes.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTTypes.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTTypes.cpp [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLHandler.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLHandler.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLHandler.cpp [ 68%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTUnaryFunctionNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTUnaryFunctionNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTUnaryFunctionNode.cpp [ 68%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLInputStream.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLInputStream.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLInputStream.cpp [ 68%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLMemoryBuffer.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLMemoryBuffer.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLMemoryBuffer.cpp [ 68%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/L3Parser.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/L3Parser.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/L3Parser.cpp [ 68%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/L3ParserSettings.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/L3ParserSettings.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/L3ParserSettings.cpp [ 68%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNamespaces.cpp [ 68%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/MathML.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/MathML.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/MathML.cpp [ 68%] Building C object src/CMakeFiles/sbml.dir/sbml/math/FormulaFormatter.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/FormulaFormatter.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/FormulaFormatter.c [ 68%] Building C object src/CMakeFiles/sbml.dir/sbml/math/FormulaParser.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/FormulaParser.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/FormulaParser.c [ 68%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.cpp [ 68%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLOutputStream.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLOutputStream.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLOutputStream.cpp [ 68%] Building C object src/CMakeFiles/sbml.dir/sbml/math/FormulaTokenizer.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/FormulaTokenizer.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/FormulaTokenizer.c [ 68%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLParser.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLParser.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLParser.cpp [ 68%] Building C object src/CMakeFiles/sbml.dir/sbml/math/L3FormulaFormatter.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/L3FormulaFormatter.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/L3FormulaFormatter.c [ 68%] Building CXX object src/CMakeFiles/sbml.dir/sbml/compress/CompressCommon.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/compress/CompressCommon.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/CompressCommon.cpp [ 68%] Building CXX object src/CMakeFiles/sbml.dir/sbml/compress/InputDecompressor.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/compress/InputDecompressor.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/InputDecompressor.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLOutputStream.cpp: In member function 'void XMLOutputStream::writeComment(const string&, const string&, bool)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLOutputStream.cpp:987:35: warning: '%02d' directive writing between 2 and 11 bytes into a region of size between 5 and 15 [-Wformat-overflow=] BUILDSTDERR: sprintf(formattedDateAndTime, "%d-%02d-%02d %02d:%02d", BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLOutputStream.cpp:987:35: note: directive argument in the range [-2147483647, 2147483647] BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /usr/include/c++/8/bits/locale_classes.h:40, BUILDSTDERR: from /usr/include/c++/8/bits/ios_base.h:41, BUILDSTDERR: from /usr/include/c++/8/ios:42, BUILDSTDERR: from /usr/include/c++/8/ostream:38, BUILDSTDERR: from /usr/include/c++/8/iostream:39, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLOutputStream.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 14 and 60 bytes into a destination of size 17 BUILDSTDERR: return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 68%] Building CXX object src/CMakeFiles/sbml.dir/sbml/compress/OutputCompressor.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/compress/OutputCompressor.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/OutputCompressor.cpp [ 69%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLTokenizer.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLTokenizer.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLTokenizer.cpp [ 69%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLToken.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLToken.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.cpp [ 69%] Building CXX object src/CMakeFiles/sbml.dir/sbml/compress/bzfstream.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/compress/bzfstream.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/bzfstream.cpp [ 69%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLTriple.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLTriple.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLTriple.cpp [ 70%] Building CXX object src/CMakeFiles/sbml.dir/sbml/compress/zfstream.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/compress/zfstream.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/zfstream.cpp [ 70%] Building CXX object src/CMakeFiles/sbml.dir/sbml/compress/zipfstream.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/compress/zipfstream.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/zipfstream.cpp [ 70%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLAttributes.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLAttributes.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.cpp [ 70%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLBuffer.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLBuffer.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLBuffer.cpp [ 70%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLConstructorException.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLConstructorException.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLConstructorException.cpp [ 70%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLError.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLError.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLError.cpp [ 70%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/LibXMLAttributes.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/LibXMLAttributes.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/LibXMLAttributes.cpp [ 70%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLErrorLog.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLErrorLog.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLErrorLog.cpp [ 70%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/LibXMLHandler.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/LibXMLHandler.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/LibXMLHandler.cpp [ 70%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLLogOverride.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLLogOverride.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLLogOverride.cpp [ 70%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLFileBuffer.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLFileBuffer.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLFileBuffer.cpp [ 70%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLHandler.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLHandler.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLHandler.cpp [ 70%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/LibXMLNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/LibXMLNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/LibXMLNamespaces.cpp [ 70%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLInputStream.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLInputStream.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLInputStream.cpp [ 70%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLMemoryBuffer.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLMemoryBuffer.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLMemoryBuffer.cpp [ 70%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNamespaces.cpp [ 71%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.cpp [ 71%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/LibXMLParser.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/LibXMLParser.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/LibXMLParser.cpp [ 71%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/LibXMLTranscode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/LibXMLTranscode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/LibXMLTranscode.cpp [ 71%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLOutputStream.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLOutputStream.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLOutputStream.cpp [ 71%] Linking CXX static library libsbml-static.a cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/cmake -P CMakeFiles/sbml-static.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/sbml-static.dir/link.txt --verbose=1 /usr/bin/ar qc libsbml-static.a CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompExtension.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/CompBase.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Deletion.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ModelDefinition.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Port.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ReplacedBy.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ReplacedElement.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Replacing.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Submodel.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLResolver.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLUri.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/ClassReplacements.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniquePortIds.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcExtension.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Association.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Objective.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/CobraToFbcConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcToCobraConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcV1ToV2Converter.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsExtension.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Group.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Member.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutExtension.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutModelPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/BoundingBox.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/CompartmentGlyph.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/CubicBezier.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Curve.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Dimensions.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Layout.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/LineSegment.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Point.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/TextGlyph.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/util/LayoutAnnotation.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/util/LayoutUtilities.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiASTPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiExtension.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiModelPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/CompartmentReference.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/IntraSpeciesReaction.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/MultiSpeciesType.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/OutwardBindingSite.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeature.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeatureType.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiIdentifierConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiMathMLConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiConsistencyConstraints.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiIdBase.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiIdentifierConsistencyConstraints.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckRepresentationType.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckSpeciesReference.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiMathMLConsistencyConstraints.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueCRefIdsWithinCompartment.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueISTBIdsWithinMultiSpeciesType.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueMultiComponentIds.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueMultiIdBase.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSFTIdsWithinMultiSpeciesType.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSLOSFIdsWithinSpecies.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSTCIdsWithinMultiSpeciesType.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSTIIdsWithinMultiSpeciesType.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSpeciesFeatureIdsWithinSpecies.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualExtension.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Input.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Output.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Transition.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualIdentifierConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QSAssignedOnce.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QualCSymbolMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderExtension.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ColorDefinition.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/DefaultValues.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Ellipse.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GradientBase.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GradientStop.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Image.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LineEnding.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LinearGradient.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LocalStyle.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Polygon.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RadialGradient.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Rectangle.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RelAbsVector.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCurve.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderGroup.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderPoint.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Style.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Text.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation2D.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/util/RenderLayoutConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/util/RenderUtilities.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/annotation/CVTerm.cpp.o CMakeFiles/sbml-static.dir/sbml/annotation/Date.cpp.o CMakeFiles/sbml-static.dir/sbml/annotation/ModelCreator.cpp.o CMakeFiles/sbml-static.dir/sbml/annotation/ModelHistory.cpp.o CMakeFiles/sbml-static.dir/sbml/annotation/RDFAnnotationParser.cpp.o CMakeFiles/sbml-static.dir/sbml/common/libsbml-version.cpp.o CMakeFiles/sbml-static.dir/sbml/common/operationReturnValues.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/ConversionOption.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/ConversionProperties.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/RegisterConverters.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLConverterRegistry.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLFunctionDefinitionConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLIdConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLInferUnitsConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRateOfConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLReactionConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRuleConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLUnitsConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/extension/ASTBasePlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtension.cpp.o CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionException.cpp.o CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionRegistry.cpp.o CMakeFiles/sbml-static.dir/sbml/extension/SBaseExtensionPoint.cpp.o CMakeFiles/sbml-static.dir/sbml/extension/SBasePlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/extension/SBasePluginCreatorBase.cpp.o CMakeFiles/sbml-static.dir/sbml/AlgebraicRule.cpp.o CMakeFiles/sbml-static.dir/sbml/AssignmentRule.cpp.o CMakeFiles/sbml-static.dir/sbml/Compartment.cpp.o CMakeFiles/sbml-static.dir/sbml/CompartmentType.cpp.o CMakeFiles/sbml-static.dir/sbml/Constraint.cpp.o CMakeFiles/sbml-static.dir/sbml/Delay.cpp.o CMakeFiles/sbml-static.dir/sbml/Event.cpp.o CMakeFiles/sbml-static.dir/sbml/EventAssignment.cpp.o CMakeFiles/sbml-static.dir/sbml/ExpectedAttributes.cpp.o CMakeFiles/sbml-static.dir/sbml/FunctionDefinition.cpp.o CMakeFiles/sbml-static.dir/sbml/InitialAssignment.cpp.o CMakeFiles/sbml-static.dir/sbml/KineticLaw.cpp.o CMakeFiles/sbml-static.dir/sbml/ListOf.cpp.o CMakeFiles/sbml-static.dir/sbml/LocalParameter.cpp.o CMakeFiles/sbml-static.dir/sbml/Model.cpp.o CMakeFiles/sbml-static.dir/sbml/ModifierSpeciesReference.cpp.o CMakeFiles/sbml-static.dir/sbml/Parameter.cpp.o CMakeFiles/sbml-static.dir/sbml/Priority.cpp.o CMakeFiles/sbml-static.dir/sbml/RateRule.cpp.o CMakeFiles/sbml-static.dir/sbml/Reaction.cpp.o CMakeFiles/sbml-static.dir/sbml/Rule.cpp.o CMakeFiles/sbml-static.dir/sbml/SBMLConstructorException.cpp.o CMakeFiles/sbml-static.dir/sbml/SBMLConvert.cpp.o CMakeFiles/sbml-static.dir/sbml/SBMLDocument.cpp.o CMakeFiles/sbml-static.dir/sbml/SBMLError.cpp.o CMakeFiles/sbml-static.dir/sbml/SBMLErrorLog.cpp.o CMakeFiles/sbml-static.dir/sbml/SBMLNamespaces.cpp.o CMakeFiles/sbml-static.dir/sbml/SBMLReader.cpp.o CMakeFiles/sbml-static.dir/sbml/SBMLTransforms.cpp.o CMakeFiles/sbml-static.dir/sbml/SBMLTypeCodes.cpp.o CMakeFiles/sbml-static.dir/sbml/SBMLVisitor.cpp.o CMakeFiles/sbml-static.dir/sbml/SBMLWriter.cpp.o CMakeFiles/sbml-static.dir/sbml/SBO.cpp.o CMakeFiles/sbml-static.dir/sbml/SBase.cpp.o CMakeFiles/sbml-static.dir/sbml/SimpleSpeciesReference.cpp.o CMakeFiles/sbml-static.dir/sbml/Species.cpp.o CMakeFiles/sbml-static.dir/sbml/SpeciesReference.cpp.o CMakeFiles/sbml-static.dir/sbml/SpeciesType.cpp.o CMakeFiles/sbml-static.dir/sbml/StoichiometryMath.cpp.o CMakeFiles/sbml-static.dir/sbml/SyntaxChecker.cpp.o CMakeFiles/sbml-static.dir/sbml/Trigger.cpp.o CMakeFiles/sbml-static.dir/sbml/Unit.cpp.o CMakeFiles/sbml-static.dir/sbml/UnitDefinition.cpp.o CMakeFiles/sbml-static.dir/sbml/UnitKind.c.o CMakeFiles/sbml-static.dir/sbml/units/FormulaUnitsData.cpp.o CMakeFiles/sbml-static.dir/sbml/units/UnitFormulaFormatter.cpp.o CMakeFiles/sbml-static.dir/sbml/units/UnitKindList.cpp.o CMakeFiles/sbml-static.dir/sbml/util/ElementFilter.cpp.o CMakeFiles/sbml-static.dir/sbml/util/IdFilter.cpp.o CMakeFiles/sbml-static.dir/sbml/util/IdList.cpp.o CMakeFiles/sbml-static.dir/sbml/util/IdentifierTransformer.cpp.o CMakeFiles/sbml-static.dir/sbml/util/List.cpp.o CMakeFiles/sbml-static.dir/sbml/util/MetaIdFilter.cpp.o CMakeFiles/sbml-static.dir/sbml/util/PrefixTransformer.cpp.o CMakeFiles/sbml-static.dir/sbml/util/util.cpp.o CMakeFiles/sbml-static.dir/sbml/util/Stack.c.o CMakeFiles/sbml-static.dir/sbml/util/StringBuffer.c.o CMakeFiles/sbml-static.dir/sbml/util/memory.c.o CMakeFiles/sbml-static.dir/sbml/validator/ConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/IdentifierConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/InternalConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/L1CompatibilityValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/L2v1CompatibilityValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/L2v2CompatibilityValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/L2v3CompatibilityValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/L2v4CompatibilityValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/L3v1CompatibilityValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/L3v2CompatibilityValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/MathMLConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/ModelingPracticeValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/OverdeterminedValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/SBMLExternalValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/SBMLInternalValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/SBMLValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/SBOConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/UnitConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/VConstraint.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/Validator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ArgumentsUnitsCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/AssignmentCycles.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/AssignmentRuleOrdering.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/CiElementMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/CiElementNot0DComp.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/CompartmentOutsideCycles.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/EqualityArgsMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ExponentUnitsCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionApplyMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionDefinitionRecursion.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionDefinitionVars.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionReferredToExists.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdBase.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawUnitsCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawVars.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/LambdaMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/LocalParameterMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/LogicalArgsMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/MathMLBase.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ModelUnitsDangling.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumberArgsMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumericArgsMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumericReturnMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/OverDeterminedCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/PieceBooleanMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/PiecewiseValueMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/PowerUnitsCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCycles.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ReportEmptyListOf.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/StoichiometryMathVars.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdBase.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsInModel.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueMetaId.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInRules.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UnitsBase.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTBase.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTBinaryFunctionNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbol.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolAvogadroNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolDelayNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolRateOfNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolTimeNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTCiFunctionNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTCiNumberNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTCnBase.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTCnExponentialNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTCnIntegerNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTCnRationalNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTCnRealNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTConstantNumberNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTFunction.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTFunctionBase.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTLambdaFunctionNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTNaryFunctionNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTNumber.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTPiecewiseFunctionNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTQualifierNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTSemanticsNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTTypes.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTUnaryFunctionNode.cpp.o [ 71%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLParser.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLParser.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLParser.cpp [ 71%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLToken.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLToken.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLOutputStream.cpp: In member function 'void XMLOutputStream::writeComment(const string&, const string&, bool)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLOutputStream.cpp:987:35: warning: '%02d' directive writing between 2 and 11 bytes into a region of size between 5 and 15 [-Wformat-overflow=] BUILDSTDERR: sprintf(formattedDateAndTime, "%d-%02d-%02d %02d:%02d", BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLOutputStream.cpp:987:35: note: directive argument in the range [-2147483647, 2147483647] BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /usr/include/c++/8/bits/locale_classes.h:40, BUILDSTDERR: from /usr/include/c++/8/bits/ios_base.h:41, BUILDSTDERR: from /usr/include/c++/8/ios:42, BUILDSTDERR: from /usr/include/c++/8/ostream:38, BUILDSTDERR: from /usr/include/c++/8/iostream:39, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLOutputStream.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 14 and 60 bytes into a destination of size 17 BUILDSTDERR: return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 71%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLTokenizer.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLTokenizer.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLTokenizer.cpp [ 71%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLTriple.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLTriple.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLTriple.cpp /usr/bin/ar q libsbml-static.a CMakeFiles/sbml-static.dir/sbml/math/L3Parser.cpp.o CMakeFiles/sbml-static.dir/sbml/math/L3ParserSettings.cpp.o CMakeFiles/sbml-static.dir/sbml/math/MathML.cpp.o CMakeFiles/sbml-static.dir/sbml/math/FormulaFormatter.c.o CMakeFiles/sbml-static.dir/sbml/math/FormulaParser.c.o CMakeFiles/sbml-static.dir/sbml/math/FormulaTokenizer.c.o CMakeFiles/sbml-static.dir/sbml/math/L3FormulaFormatter.c.o CMakeFiles/sbml-static.dir/sbml/compress/CompressCommon.cpp.o CMakeFiles/sbml-static.dir/sbml/compress/InputDecompressor.cpp.o CMakeFiles/sbml-static.dir/sbml/compress/OutputCompressor.cpp.o CMakeFiles/sbml-static.dir/sbml/compress/bzfstream.cpp.o CMakeFiles/sbml-static.dir/sbml/compress/zfstream.cpp.o CMakeFiles/sbml-static.dir/sbml/compress/zipfstream.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLAttributes.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLBuffer.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLConstructorException.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLError.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLErrorLog.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLLogOverride.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLFileBuffer.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLHandler.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLInputStream.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLMemoryBuffer.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLNamespaces.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLNode.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLOutputStream.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLParser.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLToken.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLTokenizer.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLTriple.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/LibXMLAttributes.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/LibXMLHandler.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/LibXMLNamespaces.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/LibXMLParser.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/LibXMLTranscode.cpp.o [ 71%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/LibXMLAttributes.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/LibXMLAttributes.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/LibXMLAttributes.cpp [ 71%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/LibXMLHandler.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/LibXMLHandler.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/LibXMLHandler.cpp [ 71%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/LibXMLNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/LibXMLNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/LibXMLNamespaces.cpp [ 71%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/LibXMLParser.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/LibXMLParser.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/LibXMLParser.cpp [ 71%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/LibXMLTranscode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/LibXMLTranscode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/LibXMLTranscode.cpp /usr/bin/ranlib libsbml-static.a [ 71%] Linking CXX shared library libsbml.so cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/sbml.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libsbml.so.5 -o libsbml.so.5.17.0 CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompExtension.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/CompBase.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Deletion.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ModelDefinition.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Port.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ReplacedBy.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ReplacedElement.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Replacing.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Submodel.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolver.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLUri.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/ClassReplacements.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniquePortIds.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcExtension.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Association.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Objective.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/util/CobraToFbcConverter.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcToCobraConverter.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcV1ToV2Converter.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp.o CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsExtension.cpp.o CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/groups/sbml/Group.cpp.o CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o CMakeFiles/sbml.dir/sbml/packages/groups/sbml/Member.cpp.o CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp.o CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp.o CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutExtension.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutModelPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/BoundingBox.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/CompartmentGlyph.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/CubicBezier.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Curve.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Dimensions.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Layout.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/LineSegment.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Point.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/TextGlyph.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/util/LayoutAnnotation.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/util/LayoutUtilities.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiASTPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiExtension.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiModelPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/CompartmentReference.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/IntraSpeciesReaction.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/MultiSpeciesType.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/OutwardBindingSite.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeature.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeatureType.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/MultiConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/MultiIdentifierConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/MultiMathMLConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/MultiValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiConsistencyConstraints.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiIdBase.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiIdentifierConsistencyConstraints.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckRepresentationType.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckSpeciesReference.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiMathMLConsistencyConstraints.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueCRefIdsWithinCompartment.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueISTBIdsWithinMultiSpeciesType.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueMultiComponentIds.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueMultiIdBase.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSFTIdsWithinMultiSpeciesType.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSLOSFIdsWithinSpecies.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSTCIdsWithinMultiSpeciesType.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSTIIdsWithinMultiSpeciesType.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSpeciesFeatureIdsWithinSpecies.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualExtension.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Input.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Output.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Transition.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualIdentifierConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QSAssignedOnce.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QualCSymbolMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderExtension.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ColorDefinition.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/DefaultValues.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Ellipse.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GradientBase.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GradientStop.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Image.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/LineEnding.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/LinearGradient.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalStyle.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Polygon.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RadialGradient.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Rectangle.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RelAbsVector.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCurve.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderGroup.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderPoint.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Style.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Text.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation2D.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/util/RenderLayoutConverter.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/util/RenderUtilities.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderValidator.cpp.o CMakeFiles/sbml.dir/sbml/annotation/CVTerm.cpp.o CMakeFiles/sbml.dir/sbml/annotation/Date.cpp.o CMakeFiles/sbml.dir/sbml/annotation/ModelCreator.cpp.o CMakeFiles/sbml.dir/sbml/annotation/ModelHistory.cpp.o CMakeFiles/sbml.dir/sbml/annotation/RDFAnnotationParser.cpp.o CMakeFiles/sbml.dir/sbml/common/libsbml-version.cpp.o CMakeFiles/sbml.dir/sbml/common/operationReturnValues.cpp.o CMakeFiles/sbml.dir/sbml/conversion/ConversionOption.cpp.o CMakeFiles/sbml.dir/sbml/conversion/ConversionProperties.cpp.o CMakeFiles/sbml.dir/sbml/conversion/RegisterConverters.cpp.o CMakeFiles/sbml.dir/sbml/conversion/SBMLConverter.cpp.o CMakeFiles/sbml.dir/sbml/conversion/SBMLConverterRegistry.cpp.o CMakeFiles/sbml.dir/sbml/conversion/SBMLFunctionDefinitionConverter.cpp.o CMakeFiles/sbml.dir/sbml/conversion/SBMLIdConverter.cpp.o CMakeFiles/sbml.dir/sbml/conversion/SBMLInferUnitsConverter.cpp.o CMakeFiles/sbml.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o CMakeFiles/sbml.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o CMakeFiles/sbml.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o CMakeFiles/sbml.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o CMakeFiles/sbml.dir/sbml/conversion/SBMLRateOfConverter.cpp.o CMakeFiles/sbml.dir/sbml/conversion/SBMLReactionConverter.cpp.o CMakeFiles/sbml.dir/sbml/conversion/SBMLRuleConverter.cpp.o CMakeFiles/sbml.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o CMakeFiles/sbml.dir/sbml/conversion/SBMLUnitsConverter.cpp.o CMakeFiles/sbml.dir/sbml/extension/ASTBasePlugin.cpp.o CMakeFiles/sbml.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o CMakeFiles/sbml.dir/sbml/extension/SBMLDocumentPlugin.cpp.o CMakeFiles/sbml.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o CMakeFiles/sbml.dir/sbml/extension/SBMLExtension.cpp.o CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionException.cpp.o CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionRegistry.cpp.o CMakeFiles/sbml.dir/sbml/extension/SBaseExtensionPoint.cpp.o CMakeFiles/sbml.dir/sbml/extension/SBasePlugin.cpp.o CMakeFiles/sbml.dir/sbml/extension/SBasePluginCreatorBase.cpp.o CMakeFiles/sbml.dir/sbml/AlgebraicRule.cpp.o CMakeFiles/sbml.dir/sbml/AssignmentRule.cpp.o CMakeFiles/sbml.dir/sbml/Compartment.cpp.o CMakeFiles/sbml.dir/sbml/CompartmentType.cpp.o CMakeFiles/sbml.dir/sbml/Constraint.cpp.o CMakeFiles/sbml.dir/sbml/Delay.cpp.o CMakeFiles/sbml.dir/sbml/Event.cpp.o CMakeFiles/sbml.dir/sbml/EventAssignment.cpp.o CMakeFiles/sbml.dir/sbml/ExpectedAttributes.cpp.o CMakeFiles/sbml.dir/sbml/FunctionDefinition.cpp.o CMakeFiles/sbml.dir/sbml/InitialAssignment.cpp.o CMakeFiles/sbml.dir/sbml/KineticLaw.cpp.o CMakeFiles/sbml.dir/sbml/ListOf.cpp.o CMakeFiles/sbml.dir/sbml/LocalParameter.cpp.o CMakeFiles/sbml.dir/sbml/Model.cpp.o CMakeFiles/sbml.dir/sbml/ModifierSpeciesReference.cpp.o CMakeFiles/sbml.dir/sbml/Parameter.cpp.o CMakeFiles/sbml.dir/sbml/Priority.cpp.o CMakeFiles/sbml.dir/sbml/RateRule.cpp.o CMakeFiles/sbml.dir/sbml/Reaction.cpp.o CMakeFiles/sbml.dir/sbml/Rule.cpp.o CMakeFiles/sbml.dir/sbml/SBMLConstructorException.cpp.o CMakeFiles/sbml.dir/sbml/SBMLConvert.cpp.o CMakeFiles/sbml.dir/sbml/SBMLDocument.cpp.o CMakeFiles/sbml.dir/sbml/SBMLError.cpp.o CMakeFiles/sbml.dir/sbml/SBMLErrorLog.cpp.o CMakeFiles/sbml.dir/sbml/SBMLNamespaces.cpp.o CMakeFiles/sbml.dir/sbml/SBMLReader.cpp.o CMakeFiles/sbml.dir/sbml/SBMLTransforms.cpp.o CMakeFiles/sbml.dir/sbml/SBMLTypeCodes.cpp.o CMakeFiles/sbml.dir/sbml/SBMLVisitor.cpp.o CMakeFiles/sbml.dir/sbml/SBMLWriter.cpp.o CMakeFiles/sbml.dir/sbml/SBO.cpp.o CMakeFiles/sbml.dir/sbml/SBase.cpp.o CMakeFiles/sbml.dir/sbml/SimpleSpeciesReference.cpp.o CMakeFiles/sbml.dir/sbml/Species.cpp.o CMakeFiles/sbml.dir/sbml/SpeciesReference.cpp.o CMakeFiles/sbml.dir/sbml/SpeciesType.cpp.o CMakeFiles/sbml.dir/sbml/StoichiometryMath.cpp.o CMakeFiles/sbml.dir/sbml/SyntaxChecker.cpp.o CMakeFiles/sbml.dir/sbml/Trigger.cpp.o CMakeFiles/sbml.dir/sbml/Unit.cpp.o CMakeFiles/sbml.dir/sbml/UnitDefinition.cpp.o CMakeFiles/sbml.dir/sbml/UnitKind.c.o CMakeFiles/sbml.dir/sbml/units/FormulaUnitsData.cpp.o CMakeFiles/sbml.dir/sbml/units/UnitFormulaFormatter.cpp.o CMakeFiles/sbml.dir/sbml/units/UnitKindList.cpp.o CMakeFiles/sbml.dir/sbml/util/ElementFilter.cpp.o CMakeFiles/sbml.dir/sbml/util/IdFilter.cpp.o CMakeFiles/sbml.dir/sbml/util/IdList.cpp.o CMakeFiles/sbml.dir/sbml/util/IdentifierTransformer.cpp.o CMakeFiles/sbml.dir/sbml/util/List.cpp.o CMakeFiles/sbml.dir/sbml/util/MetaIdFilter.cpp.o CMakeFiles/sbml.dir/sbml/util/PrefixTransformer.cpp.o CMakeFiles/sbml.dir/sbml/util/util.cpp.o CMakeFiles/sbml.dir/sbml/util/Stack.c.o CMakeFiles/sbml.dir/sbml/util/StringBuffer.c.o CMakeFiles/sbml.dir/sbml/util/memory.c.o CMakeFiles/sbml.dir/sbml/validator/ConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/IdentifierConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/InternalConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/L1CompatibilityValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/L2v1CompatibilityValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/L2v2CompatibilityValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/L2v3CompatibilityValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/L2v4CompatibilityValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/L3v1CompatibilityValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/L3v2CompatibilityValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/MathMLConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/ModelingPracticeValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/OverdeterminedValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/SBMLExternalValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/SBMLInternalValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/SBMLValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/SBOConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/UnitConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/VConstraint.cpp.o CMakeFiles/sbml.dir/sbml/validator/Validator.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/ArgumentsUnitsCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/AssignmentCycles.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/AssignmentRuleOrdering.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/CiElementMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/CiElementNot0DComp.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/CompartmentOutsideCycles.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/EqualityArgsMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/ExponentUnitsCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionApplyMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionDefinitionRecursion.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionDefinitionVars.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionReferredToExists.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/IdBase.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/KineticLawUnitsCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/KineticLawVars.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/LambdaMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/LocalParameterMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/LogicalArgsMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/MathMLBase.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/ModelUnitsDangling.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/NumberArgsMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/NumericArgsMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/NumericReturnMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/OverDeterminedCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/PieceBooleanMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/PiecewiseValueMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/PowerUnitsCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCycles.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/ReportEmptyListOf.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/StoichiometryMathVars.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdBase.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsInModel.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueMetaId.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInRules.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/UnitsBase.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTBase.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTBinaryFunctionNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTCSymbol.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTCSymbolAvogadroNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTCSymbolDelayNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTCSymbolRateOfNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTCSymbolTimeNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTCiFunctionNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTCiNumberNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTCnBase.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTCnExponentialNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTCnIntegerNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTCnRationalNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTCnRealNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTConstantNumberNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTFunction.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTFunctionBase.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTLambdaFunctionNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTNaryFunctionNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTNumber.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTPiecewiseFunctionNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTQualifierNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTSemanticsNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTTypes.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTUnaryFunctionNode.cpp.o CMakeFiles/sbml.dir/sbml/math/L3Parser.cpp.o CMakeFiles/sbml.dir/sbml/math/L3ParserSettings.cpp.o CMakeFiles/sbml.dir/sbml/math/MathML.cpp.o CMakeFiles/sbml.dir/sbml/math/FormulaFormatter.c.o CMakeFiles/sbml.dir/sbml/math/FormulaParser.c.o CMakeFiles/sbml.dir/sbml/math/FormulaTokenizer.c.o CMakeFiles/sbml.dir/sbml/math/L3FormulaFormatter.c.o CMakeFiles/sbml.dir/sbml/compress/CompressCommon.cpp.o CMakeFiles/sbml.dir/sbml/compress/InputDecompressor.cpp.o CMakeFiles/sbml.dir/sbml/compress/OutputCompressor.cpp.o CMakeFiles/sbml.dir/sbml/compress/bzfstream.cpp.o CMakeFiles/sbml.dir/sbml/compress/zfstream.cpp.o CMakeFiles/sbml.dir/sbml/compress/zipfstream.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLAttributes.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLBuffer.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLConstructorException.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLError.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLErrorLog.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLLogOverride.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLFileBuffer.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLHandler.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLInputStream.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLMemoryBuffer.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLNamespaces.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLNode.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLOutputStream.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLParser.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLToken.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLTokenizer.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLTriple.cpp.o CMakeFiles/sbml.dir/sbml/xml/LibXMLAttributes.cpp.o CMakeFiles/sbml.dir/sbml/xml/LibXMLHandler.cpp.o CMakeFiles/sbml.dir/sbml/xml/LibXMLNamespaces.cpp.o CMakeFiles/sbml.dir/sbml/xml/LibXMLParser.cpp.o CMakeFiles/sbml.dir/sbml/xml/LibXMLTranscode.cpp.o -lbz2 -lz -lminizip -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 71%] Built target sbml-static make -f src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/build.make src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/depend make -f src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/build.make src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/depend make -f src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/build.make src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/DependInfo.cmake --color= make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/DependInfo.cmake --color= make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/util/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/DependInfo.cmake --color= Scanning dependencies of target test_comp_extensions make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/build.make src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 71%] Building CXX object src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/TestCheckConsistency.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_extensions.dir/TestCheckConsistency.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/test/TestCheckConsistency.cpp Scanning dependencies of target test_comp_util make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/build.make src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' Scanning dependencies of target test_comp_sbase make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/build.make src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/build [ 72%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_util.dir/TestCompFlatteningConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test/TestCompFlatteningConverter.cpp make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 73%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestReadWriteSBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestReadWriteSBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestReadWriteSBase.cpp [ 73%] Building CXX object src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/TestExtensionObjects.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_extensions.dir/TestExtensionObjects.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/test/TestExtensionObjects.cpp [ 73%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestSBaseObjects.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestSBaseObjects.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestSBaseObjects.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src && /usr/bin/cmake -E cmake_symlink_library libsbml.so.5.17.0 libsbml.so.5 libsbml.so make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 73%] Built target sbml make -f src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/build.make src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/DependInfo.cmake --color= Scanning dependencies of target test_comp_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/build.make src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 73%] Building CXX object src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/TestCompConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_validator.dir/TestCompConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/test/TestCompConsistencyValidator.cpp [ 73%] Building CXX object src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/test/TestFile.cpp [ 73%] Building CXX object src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/TestMultipleNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_extensions.dir/TestMultipleNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/test/TestMultipleNamespaces.cpp [ 74%] Building CXX object src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/test/TestValidator.cpp [ 74%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestDeletion.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestDeletion.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestDeletion.c [ 74%] Building CXX object src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_extensions.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/test/TestRunner.c [ 74%] Linking CXX executable test_comp_validator cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_comp_validator.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_comp_validator.dir/TestCompConsistencyValidator.cpp.o CMakeFiles/test_comp_validator.dir/TestFile.cpp.o CMakeFiles/test_comp_validator.dir/TestValidator.cpp.o -o test_comp_validator ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 74%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestExternalModelDefinition.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestExternalModelDefinition.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c [ 74%] Linking CXX executable test_comp_extensions cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_comp_extensions.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_comp_extensions.dir/TestCheckConsistency.cpp.o CMakeFiles/test_comp_extensions.dir/TestExtensionObjects.cpp.o CMakeFiles/test_comp_extensions.dir/TestMultipleNamespaces.cpp.o CMakeFiles/test_comp_extensions.dir/TestRunner.c.o -o test_comp_extensions ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 74%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestModelDefinition.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestModelDefinition.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestModelDefinition.c [ 74%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestPort.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestPort.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestPort.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 74%] Built target test_comp_validator make -f src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/build.make src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/fbc/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/DependInfo.cmake --color= [ 74%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningConverterStripPackage.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_util.dir/TestCompFlatteningConverterStripPackage.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test/TestCompFlatteningConverterStripPackage.cpp Scanning dependencies of target test_sbml_package_fbc make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/build.make src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 74%] Building CXX object src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestFbcAssociation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/fbc/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_fbc.dir/TestFbcAssociation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/test/TestFbcAssociation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 74%] Built target test_comp_extensions [ 74%] Building CXX object src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestFbcExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/fbc/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_fbc.dir/TestFbcExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/test/TestFbcExtension.cpp [ 74%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestReplacedBy.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestReplacedBy.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestReplacedBy.c make -f src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/build.make src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/fbc/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/DependInfo.cmake --color= [ 74%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestReplacedElement.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestReplacedElement.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestReplacedElement.c Scanning dependencies of target test_fbc_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/build.make src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 74%] Building CXX object src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/TestFbcConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/fbc/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_fbc_validator.dir/TestFbcConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/test/TestFbcConsistencyValidator.cpp [ 74%] Building CXX object src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestReadFbcExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/fbc/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_fbc.dir/TestReadFbcExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/test/TestReadFbcExtension.cpp [ 74%] Building CXX object src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/fbc/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_fbc_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/test/TestFile.cpp [ 74%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestRunner.c [ 74%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestSBaseRef.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestSBaseRef.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestSBaseRef.c [ 74%] Building CXX object src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/fbc/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_fbc_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/test/TestValidator.cpp [ 74%] Building CXX object src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestWriteFbcExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/fbc/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_fbc.dir/TestWriteFbcExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/test/TestWriteFbcExtension.cpp [ 74%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestSubmodel.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestSubmodel.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestSubmodel.c [ 74%] Linking CXX executable test_fbc_validator cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/fbc/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_fbc_validator.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_fbc_validator.dir/TestFbcConsistencyValidator.cpp.o CMakeFiles/test_fbc_validator.dir/TestFile.cpp.o CMakeFiles/test_fbc_validator.dir/TestValidator.cpp.o -o test_fbc_validator ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 74%] Building CXX object src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/fbc/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_fbc.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/test/TestRunner.c [ 74%] Linking CXX executable test_comp_sbase cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/sbml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_comp_sbase.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_comp_sbase.dir/TestReadWriteSBase.cpp.o CMakeFiles/test_comp_sbase.dir/TestSBaseObjects.cpp.o CMakeFiles/test_comp_sbase.dir/TestDeletion.c.o CMakeFiles/test_comp_sbase.dir/TestExternalModelDefinition.c.o CMakeFiles/test_comp_sbase.dir/TestModelDefinition.c.o CMakeFiles/test_comp_sbase.dir/TestPort.c.o CMakeFiles/test_comp_sbase.dir/TestReplacedBy.c.o CMakeFiles/test_comp_sbase.dir/TestReplacedElement.c.o CMakeFiles/test_comp_sbase.dir/TestRunner.c.o CMakeFiles/test_comp_sbase.dir/TestSBaseRef.c.o CMakeFiles/test_comp_sbase.dir/TestSubmodel.c.o -o test_comp_sbase ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 74%] Linking CXX executable test_sbml_package_fbc cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/fbc/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_package_fbc.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_sbml_package_fbc.dir/TestFbcAssociation.cpp.o CMakeFiles/test_sbml_package_fbc.dir/TestFbcExtension.cpp.o CMakeFiles/test_sbml_package_fbc.dir/TestReadFbcExtension.cpp.o CMakeFiles/test_sbml_package_fbc.dir/TestWriteFbcExtension.cpp.o CMakeFiles/test_sbml_package_fbc.dir/TestRunner.c.o -o test_sbml_package_fbc ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 74%] Built target test_fbc_validator [ 74%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningNewFlags.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_util.dir/TestCompFlatteningNewFlags.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test/TestCompFlatteningNewFlags.cpp [ 74%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningErrorMessages.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_util.dir/TestCompFlatteningErrorMessages.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test/TestCompFlatteningErrorMessages.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 74%] Built target test_comp_sbase [ 74%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningUnknownPackageRefs.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_util.dir/TestCompFlatteningUnknownPackageRefs.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test/TestCompFlatteningUnknownPackageRefs.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 74%] Built target test_sbml_package_fbc make -f src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/build.make src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/groups/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/DependInfo.cmake --color= Scanning dependencies of target test_extension_package_groups make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/build.make src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 74%] Building CXX object src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestGroupsExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/groups/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_extension_package_groups.dir/TestGroupsExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/test/TestGroupsExtension.cpp [ 74%] Building CXX object src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestGroupsModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/groups/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_extension_package_groups.dir/TestGroupsModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/test/TestGroupsModelPlugin.cpp [ 74%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompLevelVersionConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_util.dir/TestCompLevelVersionConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test/TestCompLevelVersionConverter.cpp [ 74%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestExternalModelResolving.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_util.dir/TestExternalModelResolving.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test/TestExternalModelResolving.cpp [ 74%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestURIResolvers.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_util.dir/TestURIResolvers.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test/TestURIResolvers.cpp [ 74%] Building CXX object src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestReadGroupsExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/groups/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_extension_package_groups.dir/TestReadGroupsExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/test/TestReadGroupsExtension.cpp [ 74%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_util.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test/TestRunner.c [ 74%] Building CXX object src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestWriteGroupsExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/groups/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_extension_package_groups.dir/TestWriteGroupsExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/test/TestWriteGroupsExtension.cpp [ 74%] Building CXX object src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/groups/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_extension_package_groups.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/test/TestRunner.c make -f src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/build.make src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/depend make -f src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/build.make src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/groups/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/DependInfo.cmake --color= make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/layout/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/DependInfo.cmake --color= Scanning dependencies of target test_groups_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/build.make src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 74%] Building CXX object src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/groups/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_groups_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/test/TestFile.cpp Scanning dependencies of target test_sbml_package_layout make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/build.make src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 74%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestBoundingBox.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestBoundingBox.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestBoundingBox.cpp [ 74%] Linking CXX executable test_comp_util cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/comp/util/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_comp_util.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_comp_util.dir/TestCompFlatteningConverter.cpp.o CMakeFiles/test_comp_util.dir/TestCompFlatteningConverterStripPackage.cpp.o CMakeFiles/test_comp_util.dir/TestCompFlatteningErrorMessages.cpp.o CMakeFiles/test_comp_util.dir/TestCompFlatteningNewFlags.cpp.o CMakeFiles/test_comp_util.dir/TestCompFlatteningUnknownPackageRefs.cpp.o CMakeFiles/test_comp_util.dir/TestCompLevelVersionConverter.cpp.o CMakeFiles/test_comp_util.dir/TestExternalModelResolving.cpp.o CMakeFiles/test_comp_util.dir/TestURIResolvers.cpp.o CMakeFiles/test_comp_util.dir/TestRunner.c.o -o test_comp_util ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 74%] Linking CXX executable test_extension_package_groups cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/groups/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_extension_package_groups.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_extension_package_groups.dir/TestGroupsExtension.cpp.o CMakeFiles/test_extension_package_groups.dir/TestGroupsModelPlugin.cpp.o CMakeFiles/test_extension_package_groups.dir/TestReadGroupsExtension.cpp.o CMakeFiles/test_extension_package_groups.dir/TestWriteGroupsExtension.cpp.o CMakeFiles/test_extension_package_groups.dir/TestRunner.c.o -o test_extension_package_groups ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 74%] Building CXX object src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/TestGroupsConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/groups/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_groups_validator.dir/TestGroupsConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/test/TestGroupsConsistencyValidator.cpp [ 74%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestCompartmentGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestCompartmentGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestCompartmentGlyph.cpp [ 74%] Building CXX object src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/groups/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_groups_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/test/TestValidator.cpp [ 74%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestCubicBezier.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestCubicBezier.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestCubicBezier.cpp [ 74%] Linking CXX executable test_groups_validator cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/groups/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_groups_validator.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_groups_validator.dir/TestFile.cpp.o CMakeFiles/test_groups_validator.dir/TestGroupsConsistencyValidator.cpp.o CMakeFiles/test_groups_validator.dir/TestValidator.cpp.o -o test_groups_validator ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 74%] Built target test_extension_package_groups [ 74%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestCurve.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestCurve.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestCurve.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 74%] Built target test_comp_util [ 74%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestDimensions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestDimensions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestDimensions.cpp make -f src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/build.make src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/layout/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/DependInfo.cmake --color= Scanning dependencies of target test_layout_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/build.make src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 74%] Building CXX object src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/layout/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_layout_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/test/TestFile.cpp make -f src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/build.make src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/multi/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/DependInfo.cmake --color= Scanning dependencies of target test_sbml_package_multi make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/build.make src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 74%] Building CXX object src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/TestCheckConsistency.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/multi/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_multi.dir/TestCheckConsistency.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/test/TestCheckConsistency.cpp [ 75%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestGeneralGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestGeneralGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestGeneralGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 75%] Built target test_groups_validator make -f src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/build.make src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/multi/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/DependInfo.cmake --color= [ 75%] Building CXX object src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/TestMultiAST.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/multi/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_multi.dir/TestMultiAST.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/test/TestMultiAST.cpp Scanning dependencies of target test_multi_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/build.make src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 75%] Building CXX object src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/multi/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_multi_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/test/TestFile.cpp [ 75%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestGraphicalObject.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestGraphicalObject.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestGraphicalObject.cpp [ 75%] Building CXX object src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/TestMultiConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/multi/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_multi_validator.dir/TestMultiConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/test/TestMultiConsistencyValidator.cpp [ 75%] Building CXX object src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/TestMultiExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/multi/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_multi.dir/TestMultiExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/test/TestMultiExtension.cpp [ 75%] Building CXX object src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/multi/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_multi_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/test/TestValidator.cpp [ 75%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLayout.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestLayout.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestLayout.cpp [ 75%] Building CXX object src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/multi/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_multi.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/test/TestRunner.c [ 75%] Linking CXX executable test_multi_validator cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/multi/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_multi_validator.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_multi_validator.dir/TestFile.cpp.o CMakeFiles/test_multi_validator.dir/TestMultiConsistencyValidator.cpp.o CMakeFiles/test_multi_validator.dir/TestValidator.cpp.o -o test_multi_validator ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 75%] Linking CXX executable test_sbml_package_multi cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/multi/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_package_multi.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_sbml_package_multi.dir/TestCheckConsistency.cpp.o CMakeFiles/test_sbml_package_multi.dir/TestMultiAST.cpp.o CMakeFiles/test_sbml_package_multi.dir/TestMultiExtension.cpp.o CMakeFiles/test_sbml_package_multi.dir/TestRunner.c.o -o test_sbml_package_multi ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 75%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLayoutCreation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestLayoutCreation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestLayoutCreation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 75%] Built target test_multi_validator [ 75%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLayoutFormatter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestLayoutFormatter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestLayoutFormatter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 75%] Built target test_sbml_package_multi make -f src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/build.make src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/qual/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/DependInfo.cmake --color= Scanning dependencies of target test_extension_package_qual make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/build.make src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 75%] Building CXX object src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestGetAllElements.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/qual/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_extension_package_qual.dir/TestGetAllElements.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/test/TestGetAllElements.cpp make -f src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/build.make src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/qual/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/DependInfo.cmake --color= Scanning dependencies of target test_sbml_package_qual make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/build.make src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 75%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestCopyAndClone.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_qual.dir/TestCopyAndClone.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test/TestCopyAndClone.cpp [ 75%] Building CXX object src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestQualExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/qual/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_extension_package_qual.dir/TestQualExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/test/TestQualExtension.cpp [ 75%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestDefaultTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_qual.dir/TestDefaultTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test/TestDefaultTerm.cpp [ 75%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLayoutWriting.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestLayoutWriting.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestLayoutWriting.cpp [ 75%] Building CXX object src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestReadQualExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/qual/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_extension_package_qual.dir/TestReadQualExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/test/TestReadQualExtension.cpp [ 76%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestFunctionTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_qual.dir/TestFunctionTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test/TestFunctionTerm.cpp [ 76%] Building CXX object src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestWriteQualExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/qual/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_extension_package_qual.dir/TestWriteQualExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/test/TestWriteQualExtension.cpp [ 76%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestInput.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_qual.dir/TestInput.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test/TestInput.cpp [ 76%] Building CXX object src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/qual/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_extension_package_qual.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/test/TestRunner.c [ 76%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestListOfFunctionTerms.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_qual.dir/TestListOfFunctionTerms.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test/TestListOfFunctionTerms.cpp [ 77%] Linking CXX executable test_extension_package_qual cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/qual/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_extension_package_qual.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_extension_package_qual.dir/TestGetAllElements.cpp.o CMakeFiles/test_extension_package_qual.dir/TestQualExtension.cpp.o CMakeFiles/test_extension_package_qual.dir/TestReadQualExtension.cpp.o CMakeFiles/test_extension_package_qual.dir/TestWriteQualExtension.cpp.o CMakeFiles/test_extension_package_qual.dir/TestRunner.c.o -o test_extension_package_qual ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 77%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestOutput.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_qual.dir/TestOutput.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test/TestOutput.cpp [ 77%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLineSegment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestLineSegment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestLineSegment.cpp [ 77%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestQualitativeSpecies.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_qual.dir/TestQualitativeSpecies.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test/TestQualitativeSpecies.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 77%] Built target test_extension_package_qual [ 77%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestTransition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_qual.dir/TestTransition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test/TestTransition.cpp [ 77%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestPoint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestPoint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestPoint.cpp make -f src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/build.make src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/qual/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/DependInfo.cmake --color= Scanning dependencies of target test_qual_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/build.make src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 77%] Building CXX object src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/qual/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_qual_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/test/TestFile.cpp [ 77%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_qual.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test/TestRunner.c [ 77%] Linking CXX executable test_sbml_package_qual cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/qual/sbml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_package_qual.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_sbml_package_qual.dir/TestCopyAndClone.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestDefaultTerm.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestFunctionTerm.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestInput.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestListOfFunctionTerms.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestOutput.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestQualitativeSpecies.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestTransition.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestRunner.c.o -o test_sbml_package_qual ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 77%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestReactionGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestReactionGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestReactionGlyph.cpp [ 77%] Building CXX object src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/TestQualConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/qual/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_qual_validator.dir/TestQualConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/test/TestQualConsistencyValidator.cpp [ 77%] Building CXX object src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/qual/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_qual_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/test/TestValidator.cpp [ 77%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestReferenceGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestReferenceGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestReferenceGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 77%] Built target test_sbml_package_qual make -f src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/build.make src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/DependInfo.cmake --color= [ 77%] Linking CXX executable test_qual_validator cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/qual/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_qual_validator.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_qual_validator.dir/TestFile.cpp.o CMakeFiles/test_qual_validator.dir/TestQualConsistencyValidator.cpp.o CMakeFiles/test_qual_validator.dir/TestValidator.cpp.o -o test_qual_validator ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 77%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestSBMLHandler.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestSBMLHandler.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestSBMLHandler.cpp Scanning dependencies of target test_sbml_package_render make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/build.make src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 77%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestColorDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestColorDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestColorDefinition.cpp [ 77%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestSpeciesGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestSpeciesGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestSpeciesGlyph.cpp [ 77%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestEllipse.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestEllipse.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestEllipse.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 77%] Built target test_qual_validator [ 77%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGlobalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestGlobalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestGlobalRenderInformation.cpp [ 78%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestSpeciesReferenceGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestSpeciesReferenceGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestSpeciesReferenceGlyph.cpp make -f src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/build.make src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/DependInfo.cmake --color= [ 78%] Building CXX object src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/TestLayoutConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/layout/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_layout_validator.dir/TestLayoutConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/test/TestLayoutConsistencyValidator.cpp Scanning dependencies of target test_render_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/build.make src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 78%] Building CXX object src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_render_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/test/TestFile.cpp [ 78%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestTextGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestTextGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestTextGlyph.cpp [ 78%] Building CXX object src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/layout/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_layout_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/test/TestValidator.cpp [ 78%] Building CXX object src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/TestRenderConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_render_validator.dir/TestRenderConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/test/TestRenderConsistencyValidator.cpp [ 78%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGlobalStyle.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestGlobalStyle.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestGlobalStyle.cpp [ 78%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/utility.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/utility.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/utility.cpp [ 78%] Building CXX object src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_render_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/test/TestValidator.cpp [ 78%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestRunner.c [ 79%] Linking CXX executable test_layout_validator cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/layout/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_layout_validator.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_layout_validator.dir/TestFile.cpp.o CMakeFiles/test_layout_validator.dir/TestLayoutConsistencyValidator.cpp.o CMakeFiles/test_layout_validator.dir/TestValidator.cpp.o -o test_layout_validator ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 79%] Linking CXX executable test_sbml_package_layout cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/layout/sbml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_package_layout.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_sbml_package_layout.dir/TestBoundingBox.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestCompartmentGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestCubicBezier.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestCurve.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestDimensions.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestGeneralGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestGraphicalObject.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestLayout.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestLayoutCreation.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestLayoutFormatter.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestLayoutWriting.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestLineSegment.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestPoint.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestReactionGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestReferenceGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestSBMLHandler.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestSpeciesGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestSpeciesReferenceGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestTextGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/utility.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestRunner.c.o -o test_sbml_package_layout ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 79%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGradientBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestGradientBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestGradientBase.cpp [ 80%] Linking CXX executable test_render_validator cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_render_validator.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_render_validator.dir/TestFile.cpp.o CMakeFiles/test_render_validator.dir/TestRenderConsistencyValidator.cpp.o CMakeFiles/test_render_validator.dir/TestValidator.cpp.o -o test_render_validator ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 81%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGradientStop.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestGradientStop.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestGradientStop.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 81%] Built target test_layout_validator [ 81%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive1D.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive1D.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestGraphicalPrimitive1D.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 81%] Built target test_sbml_package_layout make -f src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/build.make src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/annotation/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/DependInfo.cmake --color= make -f src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/build.make src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/conversion/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/DependInfo.cmake --color= Scanning dependencies of target test_sbml_annotation make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/build.make src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestCopyAndClone.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestCopyAndClone.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestCopyAndClone.cpp Scanning dependencies of target test_sbml_conversion make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/build.make src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 81%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestConversionOption.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestConversionOption.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestConversionOption.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 81%] Built target test_render_validator [ 81%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive2D.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive2D.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestGraphicalPrimitive2D.cpp [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestL3ModelHistory.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestL3ModelHistory.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestL3ModelHistory.cpp [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestRDFAnnotation.cpp [ 81%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestConversionProperties.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestConversionProperties.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestConversionProperties.cpp [ 81%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGroup.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestGroup.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestGroup.cpp [ 81%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestImage.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestImage.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestImage.cpp [ 81%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestInferUnitsConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestInferUnitsConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestInferUnitsConverter.cpp [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation2.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation2.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestRDFAnnotation2.cpp [ 81%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestLineEnding.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestLineEnding.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestLineEnding.cpp [ 81%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestLevelVersionConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestLevelVersionConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestLevelVersionConverter.cpp [ 81%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestRateOfConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestRateOfConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestRateOfConverter.cpp [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationMetaid.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationMetaid.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestRDFAnnotationMetaid.cpp [ 81%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestLinearGradient.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestLinearGradient.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestLinearGradient.cpp [ 81%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestSBMLConverterRegistry.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestSBMLConverterRegistry.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestSBMLConverterRegistry.cpp [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationNestedCVTerms.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationNestedCVTerms.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestRDFAnnotationNestedCVTerms.cpp [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationVCard4.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationVCard4.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestRDFAnnotationVCard4.cpp [ 82%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestSBMLRuleConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestSBMLRuleConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestSBMLRuleConverter.cpp [ 82%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestLocalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestLocalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestLocalRenderInformation.cpp [ 82%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestSyncAnnotation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestSyncAnnotation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestSyncAnnotation.cpp [ 82%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestValidation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestValidation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestValidation.cpp [ 82%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestStripPackageConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestStripPackageConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestStripPackageConverter.cpp [ 82%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestCVTerms.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestCVTerms.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestCVTerms.c [ 82%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestCVTerms_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestCVTerms_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestCVTerms_newSetters.c [ 82%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestLocalStyle.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestLocalStyle.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestLocalStyle.cpp [ 82%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestDate_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestDate_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestDate_newSetters.c [ 82%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestPolygon.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestPolygon.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestPolygon.cpp [ 82%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestUnitsConverter.cpp [ 83%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestModelCreator_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestModelCreator_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestModelCreator_newSetters.c [ 83%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter2.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter2.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestUnitsConverter2.cpp [ 83%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestModelHistory.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestModelHistory.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestModelHistory.c [ 83%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestModelHistory_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestModelHistory_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestModelHistory_newSetters.c make -f src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/build.make src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/DependInfo.cmake --color= Scanning dependencies of target test_sbml_extension make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/build.make src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 83%] Building C object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/extension/test && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestRunner.c [ 83%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestPackage.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestPackage.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestPackage.cpp [ 83%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationC.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationC.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestRDFAnnotationC.c [ 83%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestUnitsConverterL2.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestUnitsConverterL2.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestUnitsConverterL2.cpp [ 83%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestRunner.c [ 83%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestSBMLDocumentPlugin.cpp [ 83%] Linking CXX executable test_sbml_annotation cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/annotation/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_annotation.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_sbml_annotation.dir/TestCopyAndClone.cpp.o CMakeFiles/test_sbml_annotation.dir/TestL3ModelHistory.cpp.o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation.cpp.o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation2.cpp.o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationMetaid.cpp.o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationNestedCVTerms.cpp.o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationVCard4.cpp.o CMakeFiles/test_sbml_annotation.dir/TestSyncAnnotation.cpp.o CMakeFiles/test_sbml_annotation.dir/TestValidation.cpp.o CMakeFiles/test_sbml_annotation.dir/TestCVTerms.c.o CMakeFiles/test_sbml_annotation.dir/TestCVTerms_newSetters.c.o CMakeFiles/test_sbml_annotation.dir/TestDate_newSetters.c.o CMakeFiles/test_sbml_annotation.dir/TestModelCreator_newSetters.c.o CMakeFiles/test_sbml_annotation.dir/TestModelHistory.c.o CMakeFiles/test_sbml_annotation.dir/TestModelHistory_newSetters.c.o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationC.c.o CMakeFiles/test_sbml_annotation.dir/TestRunner.c.o -o test_sbml_annotation ../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 83%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestRunner.c [ 83%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBMLExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestSBMLExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestSBMLExtension.cpp [ 83%] Linking CXX executable test_sbml_conversion cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/conversion/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_conversion.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_sbml_conversion.dir/TestConversionOption.cpp.o CMakeFiles/test_sbml_conversion.dir/TestConversionProperties.cpp.o CMakeFiles/test_sbml_conversion.dir/TestInferUnitsConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestLevelVersionConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestRateOfConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestSBMLConverterRegistry.cpp.o CMakeFiles/test_sbml_conversion.dir/TestSBMLRuleConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestStripPackageConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter2.cpp.o CMakeFiles/test_sbml_conversion.dir/TestUnitsConverterL2.cpp.o CMakeFiles/test_sbml_conversion.dir/TestRunner.c.o -o test_sbml_conversion ../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 83%] Built target test_sbml_annotation make -f src/sbml/math/test/CMakeFiles/test_sbml_math.dir/build.make src/sbml/math/test/CMakeFiles/test_sbml_math.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/math/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/math/test/CMakeFiles/test_sbml_math.dir/DependInfo.cmake --color= [ 83%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestSBMLExtensionNamespaces.cpp Scanning dependencies of target test_sbml_math make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/sbml/math/test/CMakeFiles/test_sbml_math.dir/build.make src/sbml/math/test/CMakeFiles/test_sbml_math.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 83%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestChildFunctions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestChildFunctions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestChildFunctions.cpp [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionRegistry.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionRegistry.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestSBMLExtensionRegistry.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 84%] Built target test_sbml_conversion make -f src/sbml/test/CMakeFiles/test_sbml_sbml.dir/build.make src/sbml/test/CMakeFiles/test_sbml_sbml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test/CMakeFiles/test_sbml_sbml.dir/DependInfo.cmake --color= [ 84%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestGetValue.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestGetValue.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestGetValue.cpp [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBaseExtensionPoint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestSBaseExtensionPoint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestSBaseExtensionPoint.cpp [ 84%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestL3FormulaParser.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestL3FormulaParser.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestL3FormulaParser.cpp Scanning dependencies of target test_sbml_sbml make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/sbml/test/CMakeFiles/test_sbml_sbml.dir/build.make src/sbml/test/CMakeFiles/test_sbml_sbml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 84%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestAncestor.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestAncestor.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestAncestor.cpp [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBasePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestSBasePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestSBasePlugin.cpp [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestSBasePluginCreator.cpp [ 84%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestNewASTNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestNewASTNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestNewASTNode.cpp [ 84%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestAttributeFunctions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestAttributeFunctions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestAttributeFunctions.cpp [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreatorBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreatorBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestSBasePluginCreatorBase.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestAttributeFunctions.cpp:40: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestAttributeFunctions.cpp:1344:13: warning: 'void test_Attributes_Trigger_Id(int)' defined but not used [-Wunused-function] BUILDSTDERR: START_TEST (test_Attributes_Trigger_Id) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestUnknownPackage.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestUnknownPackage.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestUnknownPackage.cpp [ 84%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestConsistencyChecks.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestConsistencyChecks.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestConsistencyChecks.cpp [ 84%] Linking CXX executable test_sbml_extension cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_extension.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_sbml_extension.dir/TestRunner.c.o CMakeFiles/test_sbml_extension.dir/TestPackage.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBMLDocumentPlugin.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBMLExtension.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionNamespaces.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionRegistry.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBaseExtensionPoint.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBasePlugin.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreator.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreatorBase.cpp.o CMakeFiles/test_sbml_extension.dir/TestUnknownPackage.cpp.o -o test_sbml_extension ../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 84%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCopyAndClone.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestCopyAndClone.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestCopyAndClone.cpp [ 84%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestNewReadMathML.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestNewReadMathML.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestNewReadMathML.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 84%] Built target test_sbml_extension [ 84%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestGetMultipleObjects.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestGetMultipleObjects.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestGetMultipleObjects.cpp [ 84%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestNewWriteMathMLFromAST.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestNewWriteMathMLFromAST.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestNewWriteMathMLFromAST.cpp make -f src/sbml/units/test/CMakeFiles/test_sbml_units.dir/build.make src/sbml/units/test/CMakeFiles/test_sbml_units.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/units/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/units/test/CMakeFiles/test_sbml_units.dir/DependInfo.cmake --color= Scanning dependencies of target test_sbml_units make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/sbml/units/test/CMakeFiles/test_sbml_units.dir/build.make src/sbml/units/test/CMakeFiles/test_sbml_units.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 84%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestCalculatedUnitDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestCalculatedUnitDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestCalculatedUnitDefinitions.cpp [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestReadFromFile1.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestReadFromFile1.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestReadFromFile1.cpp [ 85%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestDerivedUnitDefinitions.cpp [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestReadFromFile2.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestReadFromFile2.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestReadFromFile2.cpp [ 85%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions_undefined.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions_undefined.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestDerivedUnitDefinitions_undefined.cpp [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestReadMathML.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestReadMathML.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestReadMathML.cpp [ 86%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestFormulaUnitsData.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestReadMathML.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestReadMathML.cpp:1529:13: warning: 'void test_element_implies(int)' defined but not used [-Wunused-function] BUILDSTDERR: START_TEST (test_element_implies) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestReadMathML.cpp:1510:13: warning: 'void test_element_rem(int)' defined but not used [-Wunused-function] BUILDSTDERR: START_TEST (test_element_rem) BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestReadMathML.cpp:1491:13: warning: 'void test_element_quotient(int)' defined but not used [-Wunused-function] BUILDSTDERR: START_TEST (test_element_quotient) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestReadMathML.cpp:1472:13: warning: 'void test_element_min(int)' defined but not used [-Wunused-function] BUILDSTDERR: START_TEST (test_element_min) BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestReadMathML.cpp:1453:13: warning: 'void test_element_max(int)' defined but not used [-Wunused-function] BUILDSTDERR: START_TEST (test_element_max) BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestValidASTNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestValidASTNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestValidASTNode.cpp [ 86%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData_map.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData_map.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestFormulaUnitsData_map.cpp [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestWriteMathML.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestWriteMathML.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestWriteMathML.cpp [ 86%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestUnitFormulaFormatter.cpp [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestWriteMathMLFromAST.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestWriteMathMLFromAST.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestWriteMathMLFromAST.cpp [ 86%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter1.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter1.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestUnitFormulaFormatter1.cpp [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestASTNode.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestASTNode.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestASTNode.c [ 86%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter2.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter2.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestUnitFormulaFormatter2.cpp [ 86%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter3.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter3.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestUnitFormulaFormatter3.cpp [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestFormulaFormatter.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestFormulaFormatter.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestFormulaFormatter.c [ 86%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUtilsUnit.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestUtilsUnit.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestUtilsUnit.cpp [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestFormulaParser.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestFormulaParser.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestFormulaParser.c [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestFormulaTokenizer.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestFormulaTokenizer.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestFormulaTokenizer.c [ 86%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUtilsUnitDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestUtilsUnitDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestUtilsUnitDefinition.cpp [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestL3FormulaFormatter.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestL3FormulaFormatter.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestL3FormulaFormatter.c [ 86%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestRunner.c [ 86%] Linking CXX executable test_sbml_units cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/units/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_units.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_sbml_units.dir/TestCalculatedUnitDefinitions.cpp.o CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions.cpp.o CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions_undefined.cpp.o CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData.cpp.o CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData_map.cpp.o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter.cpp.o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter1.cpp.o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter2.cpp.o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter3.cpp.o CMakeFiles/test_sbml_units.dir/TestUtilsUnit.cpp.o CMakeFiles/test_sbml_units.dir/TestUtilsUnitDefinition.cpp.o CMakeFiles/test_sbml_units.dir/TestRunner.c.o -o test_sbml_units ../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestL3FormulaParserC.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestL3FormulaParserC.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestL3FormulaParserC.c [ 87%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestRunner.c [ 87%] Linking CXX executable test_sbml_math cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/math/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_math.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_sbml_math.dir/TestChildFunctions.cpp.o CMakeFiles/test_sbml_math.dir/TestGetValue.cpp.o CMakeFiles/test_sbml_math.dir/TestL3FormulaParser.cpp.o CMakeFiles/test_sbml_math.dir/TestNewASTNode.cpp.o CMakeFiles/test_sbml_math.dir/TestNewReadMathML.cpp.o CMakeFiles/test_sbml_math.dir/TestNewWriteMathMLFromAST.cpp.o CMakeFiles/test_sbml_math.dir/TestReadFromFile1.cpp.o CMakeFiles/test_sbml_math.dir/TestReadFromFile2.cpp.o CMakeFiles/test_sbml_math.dir/TestReadMathML.cpp.o CMakeFiles/test_sbml_math.dir/TestValidASTNode.cpp.o CMakeFiles/test_sbml_math.dir/TestWriteMathML.cpp.o CMakeFiles/test_sbml_math.dir/TestWriteMathMLFromAST.cpp.o CMakeFiles/test_sbml_math.dir/TestASTNode.c.o CMakeFiles/test_sbml_math.dir/TestFormulaFormatter.c.o CMakeFiles/test_sbml_math.dir/TestFormulaParser.c.o CMakeFiles/test_sbml_math.dir/TestFormulaTokenizer.c.o CMakeFiles/test_sbml_math.dir/TestL3FormulaFormatter.c.o CMakeFiles/test_sbml_math.dir/TestL3FormulaParserC.c.o CMakeFiles/test_sbml_math.dir/TestRunner.c.o -o test_sbml_math ../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 87%] Built target test_sbml_units make -f src/sbml/util/test/CMakeFiles/test_sbml_util.dir/build.make src/sbml/util/test/CMakeFiles/test_sbml_util.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/util/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/util/test/CMakeFiles/test_sbml_util.dir/DependInfo.cmake --color= [ 87%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestInternalConsistencyChecks.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestInternalConsistencyChecks.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestInternalConsistencyChecks.cpp [ 87%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRadialGradient.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestRadialGradient.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRadialGradient.cpp Scanning dependencies of target test_sbml_util make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/sbml/util/test/CMakeFiles/test_sbml_util.dir/build.make src/sbml/util/test/CMakeFiles/test_sbml_util.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 87%] Building C object src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestList.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/util/test && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_util.dir/TestList.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/test/TestList.c [ 87%] Building C object src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestMemory.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/util/test && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_util.dir/TestMemory.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/test/TestMemory.c [ 87%] Building C object src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/util/test && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_util.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/test/TestRunner.c [ 88%] Building C object src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestStack.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/util/test && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_util.dir/TestStack.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/test/TestStack.c [ 88%] Building C object src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestStringBuffer.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/util/test && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_util.dir/TestStringBuffer.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/test/TestStringBuffer.c [ 88%] Building C object src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestUtil.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/util/test && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_util.dir/TestUtil.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/test/TestUtil.c [ 88%] Linking CXX executable test_sbml_util cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/util/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_util.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_sbml_util.dir/TestList.c.o CMakeFiles/test_sbml_util.dir/TestMemory.c.o CMakeFiles/test_sbml_util.dir/TestRunner.c.o CMakeFiles/test_sbml_util.dir/TestStack.c.o CMakeFiles/test_sbml_util.dir/TestStringBuffer.c.o CMakeFiles/test_sbml_util.dir/TestUtil.c.o -o test_sbml_util ../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 88%] Built target test_sbml_util make -f src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/build.make src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/DependInfo.cmake --color= Scanning dependencies of target test_sbml_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/build.make src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 88%] Building CXX object src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/TestConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_validator.dir/TestConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/test/TestConsistencyValidator.cpp [ 88%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRectangle.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestRectangle.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRectangle.cpp [ 88%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestLevelCompatibility.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestLevelCompatibility.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestLevelCompatibility.cpp [ 88%] Building CXX object src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/test/TestFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 88%] Built target test_sbml_math [ 88%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile5.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile5.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFile5.cpp [ 89%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRelAbsVector.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestRelAbsVector.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRelAbsVector.cpp [ 89%] Building CXX object src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/test/TestValidator.cpp [ 89%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderCubicBezier.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestRenderCubicBezier.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderCubicBezier.cpp [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile6.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile6.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFile6.cpp [ 89%] Linking CXX executable test_sbml_validator cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_validator.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_sbml_validator.dir/TestConsistencyValidator.cpp.o CMakeFiles/test_sbml_validator.dir/TestFile.cpp.o CMakeFiles/test_sbml_validator.dir/TestValidator.cpp.o -o test_sbml_validator ../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile7.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile7.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFile7.cpp [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile8.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile8.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFile8.cpp [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile9.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile9.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFile9.cpp [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL2V5.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL2V5.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFileL2V5.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/build.make src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/xml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/DependInfo.cmake --color= [ 90%] Built target test_sbml_validator make -f src/bindings/python/CMakeFiles/binding_python_lib.dir/build.make src/bindings/python/CMakeFiles/binding_python_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python /builddir/build/BUILD/libSBML-5.17.0-Source/build2 /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python/CMakeFiles/binding_python_lib.dir/DependInfo.cmake --color= Scanning dependencies of target test_sbml_xml make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/build.make src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 90%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestCopyAndClone.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestCopyAndClone.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestCopyAndClone.cpp [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFileL3V2.cpp Scanning dependencies of target binding_python_lib make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' make -f src/bindings/python/CMakeFiles/binding_python_lib.dir/build.make src/bindings/python/CMakeFiles/binding_python_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 90%] Building CXX object src/bindings/python/CMakeFiles/binding_python_lib.dir/libsbml_wrap.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dbinding_python_lib_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/../swig -I/builddir/build/BUILD/libSBML-5.17.0-Source/include -I/usr/include/python2.7 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/binding_python_lib.dir/libsbml_wrap.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python/libsbml_wrap.cpp [ 90%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderCurve.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestRenderCurve.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderCurve.cpp [ 90%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLAttributes.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLAttributes.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLAttributes.cpp [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_1.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_1.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFileL3V2_1.cpp [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_2.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_2.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFileL3V2_2.cpp [ 90%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLError.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLError.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLError.cpp [ 90%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestRenderExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderExtension.cpp [ 90%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLExceptions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLExceptions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLExceptions.cpp [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_3.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_3.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFileL3V2_3.cpp [ 91%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLNode.cpp [ 91%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderInformationBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestRenderInformationBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderInformationBase.cpp [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_4.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_4.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFileL3V2_4.cpp [ 91%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestRunner.c [ 91%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLAttributesC.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLAttributesC.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLAttributesC.c [ 91%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderPoint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestRenderPoint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderPoint.cpp [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_5.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_5.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFileL3V2_5.cpp [ 91%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLErrorC.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLErrorC.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLErrorC.c [ 91%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLErrorLog.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLErrorLog.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLErrorLog.c [ 91%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderReading.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestRenderReading.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderReading.cpp [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_6.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_6.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFileL3V2_6.cpp [ 91%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLInputStream.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLInputStream.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLInputStream.c [ 91%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLNamespaces.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLNamespaces.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLNamespaces.c [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadSBML.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadSBML.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadSBML.cpp [ 91%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLNode_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLNode_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLNode_newSetters.c [ 91%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLOutputStream.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLOutputStream.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLOutputStream.c [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRemoveFromParent.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestRemoveFromParent.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestRemoveFromParent.cpp [ 91%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLToken.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLToken.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLToken.c [ 91%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLToken_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLToken_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLToken_newSetters.c [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRenameIDs.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestRenameIDs.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestRenameIDs.cpp [ 91%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLTriple.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLTriple.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLTriple.c [ 92%] Linking CXX executable test_sbml_xml cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/xml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_xml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_sbml_xml.dir/TestCopyAndClone.cpp.o CMakeFiles/test_sbml_xml.dir/TestXMLAttributes.cpp.o CMakeFiles/test_sbml_xml.dir/TestXMLError.cpp.o CMakeFiles/test_sbml_xml.dir/TestXMLExceptions.cpp.o CMakeFiles/test_sbml_xml.dir/TestXMLNode.cpp.o CMakeFiles/test_sbml_xml.dir/TestRunner.c.o CMakeFiles/test_sbml_xml.dir/TestXMLAttributesC.c.o CMakeFiles/test_sbml_xml.dir/TestXMLErrorC.c.o CMakeFiles/test_sbml_xml.dir/TestXMLErrorLog.c.o CMakeFiles/test_sbml_xml.dir/TestXMLInputStream.c.o CMakeFiles/test_sbml_xml.dir/TestXMLNamespaces.c.o CMakeFiles/test_sbml_xml.dir/TestXMLNode_newSetters.c.o CMakeFiles/test_sbml_xml.dir/TestXMLOutputStream.c.o CMakeFiles/test_sbml_xml.dir/TestXMLToken.c.o CMakeFiles/test_sbml_xml.dir/TestXMLToken_newSetters.c.o CMakeFiles/test_sbml_xml.dir/TestXMLTriple.c.o -o test_sbml_xml ../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRequiredAttributes.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestRequiredAttributes.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestRequiredAttributes.cpp [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRequiredElements.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestRequiredElements.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestRequiredElements.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 93%] Built target test_sbml_xml [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLConstructorException.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBMLConstructorException.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLConstructorException.cpp [ 93%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderWriting.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestRenderWriting.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderWriting.cpp [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertFromL3V2.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertFromL3V2.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLConvertFromL3V2.cpp [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertStrict.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertStrict.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLConvertStrict.cpp [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLError.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBMLError.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLError.cpp [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBMLNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLNamespaces.cpp [ 93%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestStyle.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestStyle.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestStyle.cpp [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLParentObject.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBMLParentObject.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLParentObject.cpp [ 93%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestText.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestText.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestText.cpp [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLTransforms.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBMLTransforms.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLTransforms.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLTransforms.cpp:41: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLTransforms.cpp:787:12: warning: 'void test_SBMLTransforms_replaceIAWithFD(int)' defined but not used [-Wunused-function] BUILDSTDERR: START_TEST(test_SBMLTransforms_replaceIAWithFD) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestTransformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestTransformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestTransformation.cpp [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLValidators.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBMLValidators.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLValidators.cpp [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBase.cpp [ 93%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestTransformation2D.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestTransformation2D.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestTransformation2D.cpp [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBaseIdName.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBaseIdName.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBaseIdName.cpp [ 94%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRunner.c [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBase_newSetters.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBase_newSetters.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBase_newSetters.cpp [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestWriteL3SBML.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestWriteL3SBML.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestWriteL3SBML.cpp [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestWriteL3V2SBML.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestWriteL3V2SBML.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestWriteL3V2SBML.cpp [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestWriteSBML.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestWriteSBML.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestWriteSBML.cpp [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestAlgebraicRule.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestAlgebraicRule.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestAlgebraicRule.c [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestAssignmentRule.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestAssignmentRule.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestAssignmentRule.c BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderWriting.cpp:76: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderWriting.cpp: In function 'void test_RenderWriting_write_model_1(int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderWriting.cpp:137:13: note: variable tracking size limit exceeded with -fvar-tracking-assignments, retrying without BUILDSTDERR: START_TEST (test_RenderWriting_write_model_1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 95%] Linking CXX executable test_sbml_package_render cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/packages/render/sbml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_package_render.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_sbml_package_render.dir/TestColorDefinition.cpp.o CMakeFiles/test_sbml_package_render.dir/TestEllipse.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGlobalRenderInformation.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGlobalStyle.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGradientBase.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGradientStop.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive1D.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive2D.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGroup.cpp.o CMakeFiles/test_sbml_package_render.dir/TestImage.cpp.o CMakeFiles/test_sbml_package_render.dir/TestLineEnding.cpp.o CMakeFiles/test_sbml_package_render.dir/TestLinearGradient.cpp.o CMakeFiles/test_sbml_package_render.dir/TestLocalRenderInformation.cpp.o CMakeFiles/test_sbml_package_render.dir/TestLocalStyle.cpp.o CMakeFiles/test_sbml_package_render.dir/TestPolygon.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRadialGradient.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRectangle.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRelAbsVector.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderCubicBezier.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderCurve.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderExtension.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderInformationBase.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderPoint.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderReading.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderWriting.cpp.o CMakeFiles/test_sbml_package_render.dir/TestStyle.cpp.o CMakeFiles/test_sbml_package_render.dir/TestText.cpp.o CMakeFiles/test_sbml_package_render.dir/TestTransformation.cpp.o CMakeFiles/test_sbml_package_render.dir/TestTransformation2D.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRunner.c.o -o test_sbml_package_render ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartment.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestCompartment.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestCompartment.c [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartmentType.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestCompartmentType.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestCompartmentType.c [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartmentType_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestCompartmentType_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestCompartmentType_newSetters.c [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartmentVolumeRule.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestCompartmentVolumeRule.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestCompartmentVolumeRule.c [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartment_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestCompartment_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestCompartment_newSetters.c [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestConstraint.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestConstraint.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestConstraint.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [ 95%] Built target test_sbml_package_render [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestConstraint_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestConstraint_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestConstraint_newSetters.c [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestDelay.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestDelay.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestDelay.c [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestEvent.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestEvent.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestEvent.c [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestEventAssignment.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestEventAssignment.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestEventAssignment.c [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestEventAssignment_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestEventAssignment_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestEventAssignment_newSetters.c [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestEvent_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestEvent_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestEvent_newSetters.c [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestFunctionDefinition.c [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestFunctionDefinition_newSetters.c [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestInitialAssignment.c [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestInitialAssignment_newSetters.c [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestKineticLaw.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestKineticLaw.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestKineticLaw.c [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestKineticLaw_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestKineticLaw_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestKineticLaw_newSetters.c [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Compartment.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3Compartment.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3Compartment.c [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Event.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3Event.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3Event.c [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3KineticLaw.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3KineticLaw.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3KineticLaw.c [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3LocalParameter.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3LocalParameter.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3LocalParameter.c [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Model.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3Model.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3Model.c [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Parameter.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3Parameter.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3Parameter.c [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Reaction.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3Reaction.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3Reaction.c [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Species.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3Species.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3Species.c [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3SpeciesReference.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3SpeciesReference.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3SpeciesReference.c [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Trigger.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3Trigger.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3Trigger.c [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Unit.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3Unit.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3Unit.c [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestListOf.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestListOf.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestListOf.c [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestModel.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestModel.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestModel.c [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestModel_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestModel_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestModel_newSetters.c [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestModifierSpeciesReference.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestModifierSpeciesReference.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestModifierSpeciesReference.c [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestParameter.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestParameter.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestParameter.c [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestParameterRule.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestParameterRule.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestParameterRule.c [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestParameter_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestParameter_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestParameter_newSetters.c [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestPriority.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestPriority.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestPriority.c [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRateRule.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestRateRule.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestRateRule.c [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReaction.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReaction.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReaction.c [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReaction_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReaction_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReaction_newSetters.c [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile1.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile1.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFile1.c [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile2.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile2.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFile2.c [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile3.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile3.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFile3.c [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile4.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile4.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFile4.c [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRule.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestRule.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestRule.c [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRule_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestRule_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestRule_newSetters.c [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestRunner.c [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLConvert.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBMLConvert.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLConvert.c [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLDocument.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBMLDocument.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLDocument.c [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpecies.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSpecies.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSpecies.c [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesConcentrationRule.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSpeciesConcentrationRule.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSpeciesConcentrationRule.c [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSpeciesReference.c [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSpeciesReference_newSetters.c [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesType.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSpeciesType.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSpeciesType.c [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesType_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSpeciesType_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSpeciesType_newSetters.c [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpecies_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSpecies_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSpecies_newSetters.c [100%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestStoichiometryMath.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestStoichiometryMath.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestStoichiometryMath.c [100%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSyntaxChecker.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSyntaxChecker.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSyntaxChecker.c [100%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestTrigger.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestTrigger.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestTrigger.c [100%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnit.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestUnit.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestUnit.c [100%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestUnitDefinition.c [100%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestUnitDefinition_newSetters.c [100%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnitKind.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestUnitKind.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestUnitKind.c [100%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnit_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestUnit_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestUnit_newSetters.c [100%] Linking CXX executable test_sbml_sbml cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/sbml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_sbml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_sbml_sbml.dir/TestAncestor.cpp.o CMakeFiles/test_sbml_sbml.dir/TestAttributeFunctions.cpp.o CMakeFiles/test_sbml_sbml.dir/TestConsistencyChecks.cpp.o CMakeFiles/test_sbml_sbml.dir/TestCopyAndClone.cpp.o CMakeFiles/test_sbml_sbml.dir/TestGetMultipleObjects.cpp.o CMakeFiles/test_sbml_sbml.dir/TestInternalConsistencyChecks.cpp.o CMakeFiles/test_sbml_sbml.dir/TestLevelCompatibility.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile5.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile6.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile7.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile8.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile9.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL2V5.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_1.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_2.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_3.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_4.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_5.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_6.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadSBML.cpp.o CMakeFiles/test_sbml_sbml.dir/TestRemoveFromParent.cpp.o CMakeFiles/test_sbml_sbml.dir/TestRenameIDs.cpp.o CMakeFiles/test_sbml_sbml.dir/TestRequiredAttributes.cpp.o CMakeFiles/test_sbml_sbml.dir/TestRequiredElements.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBMLConstructorException.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertFromL3V2.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertStrict.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBMLError.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBMLNamespaces.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBMLParentObject.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBMLTransforms.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBMLValidators.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBase.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBaseIdName.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBase_newSetters.cpp.o CMakeFiles/test_sbml_sbml.dir/TestWriteL3SBML.cpp.o CMakeFiles/test_sbml_sbml.dir/TestWriteL3V2SBML.cpp.o CMakeFiles/test_sbml_sbml.dir/TestWriteSBML.cpp.o CMakeFiles/test_sbml_sbml.dir/TestAlgebraicRule.c.o CMakeFiles/test_sbml_sbml.dir/TestAssignmentRule.c.o CMakeFiles/test_sbml_sbml.dir/TestCompartment.c.o CMakeFiles/test_sbml_sbml.dir/TestCompartmentType.c.o CMakeFiles/test_sbml_sbml.dir/TestCompartmentType_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestCompartmentVolumeRule.c.o CMakeFiles/test_sbml_sbml.dir/TestCompartment_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestConstraint.c.o CMakeFiles/test_sbml_sbml.dir/TestConstraint_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestDelay.c.o CMakeFiles/test_sbml_sbml.dir/TestEvent.c.o CMakeFiles/test_sbml_sbml.dir/TestEventAssignment.c.o CMakeFiles/test_sbml_sbml.dir/TestEventAssignment_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestEvent_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition.c.o CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment.c.o CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestKineticLaw.c.o CMakeFiles/test_sbml_sbml.dir/TestKineticLaw_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Compartment.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Event.c.o CMakeFiles/test_sbml_sbml.dir/TestL3KineticLaw.c.o CMakeFiles/test_sbml_sbml.dir/TestL3LocalParameter.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Model.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Parameter.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Reaction.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Species.c.o CMakeFiles/test_sbml_sbml.dir/TestL3SpeciesReference.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Trigger.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Unit.c.o CMakeFiles/test_sbml_sbml.dir/TestListOf.c.o CMakeFiles/test_sbml_sbml.dir/TestModel.c.o CMakeFiles/test_sbml_sbml.dir/TestModel_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestModifierSpeciesReference.c.o CMakeFiles/test_sbml_sbml.dir/TestParameter.c.o CMakeFiles/test_sbml_sbml.dir/TestParameterRule.c.o CMakeFiles/test_sbml_sbml.dir/TestParameter_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestPriority.c.o CMakeFiles/test_sbml_sbml.dir/TestRateRule.c.o CMakeFiles/test_sbml_sbml.dir/TestReaction.c.o CMakeFiles/test_sbml_sbml.dir/TestReaction_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile1.c.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile2.c.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile3.c.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile4.c.o CMakeFiles/test_sbml_sbml.dir/TestRule.c.o CMakeFiles/test_sbml_sbml.dir/TestRule_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestRunner.c.o CMakeFiles/test_sbml_sbml.dir/TestSBMLConvert.c.o CMakeFiles/test_sbml_sbml.dir/TestSBMLDocument.c.o CMakeFiles/test_sbml_sbml.dir/TestSpecies.c.o CMakeFiles/test_sbml_sbml.dir/TestSpeciesConcentrationRule.c.o CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference.c.o CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestSpeciesType.c.o CMakeFiles/test_sbml_sbml.dir/TestSpeciesType_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestSpecies_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestStoichiometryMath.c.o CMakeFiles/test_sbml_sbml.dir/TestSyntaxChecker.c.o CMakeFiles/test_sbml_sbml.dir/TestTrigger.c.o CMakeFiles/test_sbml_sbml.dir/TestUnit.c.o CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition.c.o CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestUnitKind.c.o CMakeFiles/test_sbml_sbml.dir/TestUnit_newSetters.c.o -o test_sbml_sbml ../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [100%] Built target test_sbml_sbml [100%] Linking CXX shared library _libsbml.so cd /builddir/build/BUILD/libSBML-5.17.0-Source/build2/src/bindings/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_python_lib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,_libsbml.so -o _libsbml.so CMakeFiles/binding_python_lib.dir/libsbml_wrap.cpp.o ../../libsbml-static.a -lpython2.7 -lbz2 -lz -lminizip -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' [100%] Built target binding_python_lib make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build2' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSBML-5.17.0-Source/build2/CMakeFiles 0 ~/build/BUILD/libSBML-5.17.0-Source/build ~/build/BUILD/libSBML-5.17.0-Source/build2 ~/build/BUILD/libSBML-5.17.0-Source + pushd ../build + export 'LDFLAGS=-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed' + LDFLAGS='-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed' + export 'CFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now' + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now' + export 'CXXFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now' + CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now' + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed' + export LDFLAGS + /usr/bin/cmake -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DENABLE_LAYOUT=ON -DENABLE_QUAL=ON -DENABLE_COMP=ON -DENABLE_FBC=ON -DENABLE_RENDER=ON -DENABLE_GROUPS=ON -DENABLE_MULTI=ON -DCSHARP_COMPILER:FILEPATH=/usr/bin/mcs -DWITH_PYTHON:BOOL=ON -DPYTHON_INCLUDE_DIR:PATH=/usr/include/python3.6m -DPYTHON_LIBRARY:FILEPATH=/usr/lib64/libpython3.6m.so -DPYTHON_EXECUTABLE:FILEPATH=/usr/bin/python3 -DWITH_PERL:BOOL=ON -DPERL_EXECUTABLE:FILEPATH=/usr/bin/perl -DPERL_INCLUDE_PATH:PATH=/usr/lib64/perl5/CORE -DPERL_LIBRARY:FILEPATH=/usr/lib64/libperl.so -DWITH_RUBY:BOOL=ON -DRUBY_SITEARCH_DIR:PATH=/usr/local/lib64/ruby/site_ruby -DRUBY_SITELIB_DIR:PATH=/usr/local/share/ruby/site_ruby -DRUBY_VENDORARCH_DIR:PATH=/usr/lib64/ruby/vendor_ruby -DRUBY_VENDORLIB_DIR:PATH=/usr/share/ruby/vendor_ruby -DRUBY_HAS_VENDOR_RUBY:BOOL=ON -DWITH_JAVA:BOOL=ON -DWITH_JAVASCRIPT:BOOL=OFF -DWITH_SWIG:BOOL=ON -DWITH_R:BOOL=ON -DR_INCLUDE_DIRS:PATH=/usr/include/R -DWITH_CHECK=ON -DCMAKE_INSTALL_LIBDIR:PATH=/usr/lib64 -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_SKIP_RPATH:BOOL=YES -DCMAKE_SKIP_INSTALL_RPATH:BOOL=YES -DWITH_MATLAB:BOOL=OFF -Wno-dev -DEXIT_ON_ERROR:BOOL=ON .. -- The C compiler identification is GNU 8.1.1 -- The CXX compiler identification is GNU 8.1.1 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compile features -- Detecting C compile features - done -- Found SWIG: /usr/bin/swig (found version "3.0.12") -- Looking for BZ2_bzCompressInit in /usr/lib64/libbz2.so -- Looking for BZ2_bzCompressInit in /usr/lib64/libbz2.so - found -- Looking for gzopen in /usr/lib64/libz.so -- Looking for gzopen in /usr/lib64/libz.so - found -- Found PkgConfig: /usr/bin/pkg-config (found version "1.4.2") -- Checking for module 'minizip' -- Found minizip, version 1.2.11 -- Looking for include file check.h -- Looking for include file check.h - found -- Looking for include file expat.h -- Looking for include file expat.h - found -- Looking for include file errno.h -- Looking for include file errno.h - found -- Looking for include file ieeefp.h -- Looking for include file ieeefp.h - not found -- Looking for include file math.h -- Looking for include file math.h - found -- Looking for include file sys/types.h -- Looking for include file sys/types.h - found -- Looking for include file float.h -- Looking for include file float.h - found -- Check if the system is big endian -- Searching 16 bit integer -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned short -- Check size of unsigned short - done -- Using unsigned short -- Check if the system is big endian - little endian -- Looking for sqrt in m -- Looking for sqrt in m - found -- Found JNI: /usr/lib/jvm/jre/lib/riscv64/libjawt.so -- Found Java: /usr/bin/java (found version "1.8.0.144") found components: Development -- Found PythonInterp: /usr/bin/python3 (found version "3.6.5") -- Found Perl: /usr/bin/perl (found version "5.26.2") -- Found PerlLibs: /usr/lib64/libperl.so (found version "5.26.2") -- Found PythonLibs: /usr/lib64/libpython3.6m.so (found version "3.6.5") -- Found Ruby: /usr/bin/ruby (found version "2.5.1") -- ---------------------------------------------------------------------- libSBML version 5.17.0 ---------------------------------------------------------------------- More information and the latest version are available online at http://sbml.org/Software/libSBML Please report problems using the issue tracker at http://sbml.org/Software/libsbml/issue-tracker To contact the developers directly, email libsbml-team@googlegroups.com Configured on host 'vm05.home.annexia.org' host type = Linux host operating system = Linux 4.15.0-00044-g2b0aa1de45f6 host CPU architecture = riscv64 General build flags: CC = /usr/bin/cc CXX = /usr/bin/c++ CPPFLAGS = -DLINUX CFLAGS = -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC CXXFLAGS = -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC LDFLAGS = -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed XML parser library configuration: XML library = libxml2 CPPFLAGS for XML = -I/usr/include/libxml2 LIBS for XML = /usr/lib64/libxml2.so Other libSBML configuration settings: Installation $prefix = /usr -- Value of $LD_LIBRARY_PATH = -- Using SWIG = /usr/bin/swig (Version 3.0.12) -- Using Java = /usr/bin/java -- Using Python = /usr/bin/python3 -- Using Perl = /usr/bin/perl -- Using Ruby = /usr/bin/ruby -- Using R = /usr/bin/R -- Using libcheck = /usr/lib64/libcheck.so -- Using C++ namespace ('libsbml') = no -- -- Build examples = no -- -- Use Legacy Math = no -- -- Support for SBML Level 3 Packages: -- SBML 'comp' package = ON -- SBML 'fbc' package = ON -- SBML 'groups' package = ON -- SBML 'layout' package = ON -- SBML 'multi' package = ON -- SBML 'qual' package = ON -- SBML 'render' package = ON -- -- Other potentially important settings: -- Compression support is enabled for .zip and .gz files -- Compression support is enabled for .bz2 files -- ---------------------------------------------------------------------- -- Configuring done -- Generating done BUILDSTDERR: CMake Warning: BUILDSTDERR: Manually-specified variables were not used by the project: BUILDSTDERR: CMAKE_Fortran_FLAGS_RELEASE BUILDSTDERR: CMAKE_SKIP_INSTALL_RPATH BUILDSTDERR: CSHARP_COMPILER BUILDSTDERR: INCLUDE_INSTALL_DIR BUILDSTDERR: LIB_INSTALL_DIR BUILDSTDERR: LIB_SUFFIX BUILDSTDERR: SHARE_INSTALL_PREFIX BUILDSTDERR: SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/libSBML-5.17.0-Source/build + make -j4 /usr/bin/cmake -H/builddir/build/BUILD/libSBML-5.17.0-Source -B/builddir/build/BUILD/libSBML-5.17.0-Source/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSBML-5.17.0-Source/build/CMakeFiles /builddir/build/BUILD/libSBML-5.17.0-Source/build/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/CMakeFiles/sbml-static.dir/build.make src/CMakeFiles/sbml-static.dir/depend make -f src/CMakeFiles/sbml.dir/build.make src/CMakeFiles/sbml.dir/depend make -f src/bindings/java/CMakeFiles/binding_java_swig.dir/build.make src/bindings/java/CMakeFiles/binding_java_swig.dir/depend make -f src/bindings/perl/CMakeFiles/binding_perl_swig.dir/build.make src/bindings/perl/CMakeFiles/binding_perl_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/java /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/java /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/java/CMakeFiles/binding_java_swig.dir/DependInfo.cmake --color= make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/perl /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/perl/CMakeFiles/binding_perl_swig.dir/DependInfo.cmake --color= make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/CMakeFiles/sbml-static.dir/DependInfo.cmake --color= make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/CMakeFiles/sbml.dir/DependInfo.cmake --color= Scanning dependencies of target binding_perl_swig Scanning dependencies of target binding_java_swig make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/bindings/perl/CMakeFiles/binding_perl_swig.dir/build.make src/bindings/perl/CMakeFiles/binding_perl_swig.dir/build make -f src/bindings/java/CMakeFiles/binding_java_swig.dir/build.make src/bindings/java/CMakeFiles/binding_java_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 0%] Swig Java source cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/java && /usr/bin/cmake -DCUR_BIN_DIRECTORY="/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/java" -DBIN_DIRECTORY="/builddir/build/BUILD/libSBML-5.17.0-Source/build" -DCUR_SRC_DIRECTORY="/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/java" -DSRC_DIRECTORY="/builddir/build/BUILD/libSBML-5.17.0-Source" -DCMAKE_COMMAND="/usr/bin/cmake" -DPYTHON_EXECUTABLE="/usr/bin/python3" -DSWIG_SWIGDOCDEFINES="--define USE_COMP --define USE_FBC --define USE_GROUPS --define USE_LAYOUT --define USE_MULTI --define USE_QUAL --define USE_RENDER --define USE_COMP --define USE_FBC --define USE_GROUPS --define USE_MULTI --define USE_QUAL --define USE_RENDER" -DSWIG_ARGS="-DLIBSBML_COMPILED_IN_SRC -DUSE_LIBXML -DUSE_BZ2 -DUSE_ZLIB -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_LAYOUT -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER" -DSWIG_EXECUTABLE="/usr/bin/swig" -DWITH_DOXYGEN="OFF" -DLIB_NAME="" -P /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/java/swig-binding.cmake [ 0%] Swig Perl bindings source cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/perl && /usr/bin/python3 /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/../swig/swigdoc.py --language perl --top /builddir/build/BUILD/libSBML-5.17.0-Source --master /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/../swig/libsbml.i --output /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/perl/LibSBML.pod --define USE_COMP --define USE_FBC --define USE_GROUPS --define USE_LAYOUT --define USE_MULTI --define USE_QUAL --define USE_RENDER --define USE_COMP --define USE_FBC --define USE_GROUPS --define USE_MULTI --define USE_QUAL --define USE_RENDER BUILDSTDERR: Swig: Java Bindings cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/perl && /usr/bin/swig -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/../swig/ -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/include -c++ -perl5 -proxy -DLIBSBML_COMPILED_IN_SRC -DUSE_LIBXML -DUSE_BZ2 -DUSE_ZLIB -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_LAYOUT -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -o /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/perl/LibSBML_wrap.cpp /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/LibSBML.i BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLInputStream.h:232: Warning 314: 'next' is a perl keyword Scanning dependencies of target sbml-static Scanning dependencies of target sbml make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/CMakeFiles/sbml-static.dir/build.make src/CMakeFiles/sbml-static.dir/build make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/CMakeFiles/sbml.dir/build.make src/CMakeFiles/sbml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 1%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompExtension.cpp.o [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTBase.h:127: Warning 509: Overloaded method ASTBase::setType(int) effectively ignored, BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTBase.h:125: Warning 509: as it is shadowed by ASTBase::setType(ASTNodeType_t). [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp [ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp: In member function 'Submodel* CompModelPlugin::createSubmodel()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp:309:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp: In member function 'Port* CompModelPlugin::createPort()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp:450:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp: In member function 'Submodel* CompModelPlugin::createSubmodel()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp:309:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp: In member function 'Port* CompModelPlugin::createPort()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp:450:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp [ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:66, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp: In member function 'ModelDefinition* CompSBMLDocumentPlugin::createModelDefinition()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:396:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp: In member function 'ExternalModelDefinition* CompSBMLDocumentPlugin::createExternalModelDefinition()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:537:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:66, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp: In member function 'ModelDefinition* CompSBMLDocumentPlugin::createModelDefinition()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:396:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp: In member function 'ExternalModelDefinition* CompSBMLDocumentPlugin::createExternalModelDefinition()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:537:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:327: Warning 509: Overloaded method GraphicalPrimitive2D::setFillRule(FillRule_t const) effectively ignored, BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:311: Warning 509: as it is shadowed by GraphicalPrimitive2D::setFillRule(GraphicalPrimitive2D::FILL_RULE). BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.h:378: Warning 509: Overloaded method GradientBase::setSpreadMethod(GradientSpreadMethod_t const) effectively ignored, BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.h:362: Warning 509: as it is shadowed by GradientBase::setSpreadMethod(GradientBase::SPREADMETHOD). [ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h:440: Warning 509: Overloaded method Text::setFontWeight(Text::FONT_WEIGHT) effectively ignored, BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h:436: Warning 509: as it is shadowed by Text::setFontWeight(FontWeight_t const). BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h:478: Warning 509: Overloaded method Text::setFontStyle(Text::FONT_STYLE) effectively ignored, BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h:473: Warning 509: as it is shadowed by Text::setFontStyle(FontStyle_t const). BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h:514: Warning 509: Overloaded method Text::setTextAnchor(Text::TEXT_ANCHOR) effectively ignored, BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h:509: Warning 509: as it is shadowed by Text::setTextAnchor(HTextAnchor_t const). BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h:551: Warning 509: Overloaded method Text::setVTextAnchor(Text::TEXT_ANCHOR) effectively ignored, BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h:546: Warning 509: as it is shadowed by Text::setVTextAnchor(VTextAnchor_t const). BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:528: Warning 509: Overloaded method RenderGroup::setFontWeight(Text::FONT_WEIGHT) effectively ignored, BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:524: Warning 509: as it is shadowed by RenderGroup::setFontWeight(FontWeight_t const). BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:566: Warning 509: Overloaded method RenderGroup::setFontStyle(Text::FONT_STYLE) effectively ignored, BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:561: Warning 509: as it is shadowed by RenderGroup::setFontStyle(FontStyle_t const). BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:603: Warning 509: Overloaded method RenderGroup::setTextAnchor(Text::TEXT_ANCHOR) effectively ignored, BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:598: Warning 509: as it is shadowed by RenderGroup::setTextAnchor(HTextAnchor_t const). BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:675: Warning 509: Overloaded method RenderGroup::setVTextAnchor(VTextAnchor_t const) effectively ignored, BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:635: Warning 509: as it is shadowed by RenderGroup::setVTextAnchor(Text::TEXT_ANCHOR). BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:678: Warning 509: Overloaded method RenderGroup::setVtextAnchor(VTextAnchor_t const) effectively ignored, BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:639: Warning 509: as it is shadowed by RenderGroup::setVtextAnchor(Text::TEXT_ANCHOR). BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.h:63, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:32: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'virtual SBase* CompSBasePlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:164:7: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'ReplacedElement* CompSBasePlugin::createReplacedElement()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:367:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'ReplacedBy* CompSBasePlugin::createReplacedBy()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:441:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'virtual void CompSBasePlugin::createListOfReplacedElements()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:548:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.h:63, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:32: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'virtual SBase* CompSBasePlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:164:7: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'ReplacedElement* CompSBasePlugin::createReplacedElement()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:367:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'ReplacedBy* CompSBasePlugin::createReplacedBy()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:441:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'virtual void CompSBasePlugin::createListOfReplacedElements()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:548:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:906: Warning 509: Overloaded method DefaultValues::setSpreadMethod(GradientSpreadMethod_t const) effectively ignored, BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:891: Warning 509: as it is shadowed by DefaultValues::setSpreadMethod(GradientBase::SPREADMETHOD const). BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:1138: Warning 509: Overloaded method DefaultValues::setFillRule(FillRule_t) effectively ignored, BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:1122: Warning 509: as it is shadowed by DefaultValues::setFillRule(GraphicalPrimitive2D::FILL_RULE const). BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:1258: Warning 509: Overloaded method DefaultValues::setFontWeight(FontWeight_t) effectively ignored, BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:1242: Warning 509: as it is shadowed by DefaultValues::setFontWeight(Text::FONT_WEIGHT const). BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:1306: Warning 509: Overloaded method DefaultValues::setFontStyle(FontStyle_t) effectively ignored, BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:1290: Warning 509: as it is shadowed by DefaultValues::setFontStyle(Text::FONT_STYLE const). BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:1354: Warning 509: Overloaded method DefaultValues::setTextAnchor(HTextAnchor_t) effectively ignored, BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:1338: Warning 509: as it is shadowed by DefaultValues::setTextAnchor(Text::TEXT_ANCHOR const). BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:1402: Warning 509: Overloaded method DefaultValues::setVTextAnchor(VTextAnchor_t) effectively ignored, BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:1386: Warning 509: as it is shadowed by DefaultValues::setVTextAnchor(Text::TEXT_ANCHOR const). [ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/CompBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/CompBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/CompBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 2%] Built target binding_java_swig make -f src/bindings/python/CMakeFiles/binding_python_swig.dir/build.make src/bindings/python/CMakeFiles/binding_python_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python/CMakeFiles/binding_python_swig.dir/DependInfo.cmake --color= Scanning dependencies of target binding_python_swig make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/bindings/python/CMakeFiles/binding_python_swig.dir/build.make src/bindings/python/CMakeFiles/binding_python_swig.dir/build [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/CompBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/CompBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/CompBase.cpp make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 2%] Swig Python source cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python && /usr/bin/python3 /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/../swig/swigdoc.py --language python --top /builddir/build/BUILD/libSBML-5.17.0-Source --master /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/../swig/libsbml.i --output /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python/pydoc-doxygen.i --define USE_COMP --define USE_FBC --define USE_GROUPS --define USE_LAYOUT --define USE_MULTI --define USE_QUAL --define USE_RENDER --define USE_COMP --define USE_FBC --define USE_GROUPS --define USE_MULTI --define USE_QUAL --define USE_RENDER make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 2%] Built target binding_perl_swig make -f src/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build.make src/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/ruby /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/DependInfo.cmake --color= Scanning dependencies of target binding_ruby_swig make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build.make src/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 2%] Swig Ruby source cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby && /usr/bin/swig -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/ruby/../swig/ -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/ruby -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/include -c++ -ruby -DLIBSBML_COMPILED_IN_SRC -DUSE_LIBXML -DUSE_BZ2 -DUSE_ZLIB -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_LAYOUT -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -o /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/ruby/libsbml.i [ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Deletion.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Deletion.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Deletion.cpp [ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ExternalModelDefinition.cpp [ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python && /usr/bin/python3 /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python/generate-class-name-list.py /builddir/build/BUILD/libSBML-5.17.0-Source/src > /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python/class-list.txt BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp: In member function 'virtual SBase* ListOfDeletions::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp:158:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python && /usr/bin/python3 /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python/generate-converters-list.py /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python/class-list.txt > /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python/libsbml-converters.txt cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python && /usr/bin/python3 /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/doc-converter/rewrite_pydoc.py -f /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python/pydoc-doxygen.i -o /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python/pydoc-normal.i -i /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/../../../docs/src/common-text -g /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/../../../docs/src/common-graphics BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp: In member function 'virtual SBase* ListOfExternalModelDefinitions::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp:151:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp: In member function 'virtual SBase* ListOfModelDefinitions::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp:151:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp: In member function 'virtual SBase* ListOfPorts::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp:150:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp: In member function 'virtual SBase* ListOfReplacedElements::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp:114:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 3%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp: In member function 'virtual SBase* ListOfSubmodels::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp:150:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 3%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ModelDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ModelDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ModelDefinition.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python && /usr/bin/cmake -E rename pydoc-doxygen.i pydoc.i cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python && /usr/bin/swig -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/../swig/ -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/include -DGENERATING_DOCS -c++ -python -DLIBSBML_COMPILED_IN_SRC -DUSE_LIBXML -DUSE_BZ2 -DUSE_ZLIB -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_LAYOUT -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -o /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python/libsbml_wrap.cpp /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/libsbml.i [ 3%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Port.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Port.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Port.cpp [ 3%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ReplacedBy.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ReplacedBy.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ReplacedBy.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/../swig/std_set.i:65: Warning 314: 'del' is a python keyword, renaming to '_del' [ 3%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ReplacedElement.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ReplacedElement.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ReplacedElement.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/ruby/../swig/render-package.i:98: Warning 801: Wrong class name (corrected to `Double_array') BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/ruby/../swig/render-package.i:98: Warning 801: Wrong class name (corrected to `Double_array') BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/ruby/../swig/render-package.i:99: Warning 801: Wrong class name (corrected to `Int_array') BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/ruby/../swig/render-package.i:99: Warning 801: Wrong class name (corrected to `Int_array') make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 3%] Built target binding_ruby_swig [ 3%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Replacing.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Replacing.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Replacing.cpp [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Deletion.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Deletion.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Deletion.cpp make -f src/bindings/r/CMakeFiles/binding_r_swig.dir/build.make src/bindings/r/CMakeFiles/binding_r_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/r /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/CMakeFiles/binding_r_swig.dir/DependInfo.cmake --color= Scanning dependencies of target binding_r_swig make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/bindings/r/CMakeFiles/binding_r_swig.dir/build.make src/bindings/r/CMakeFiles/binding_r_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 3%] Swig: R Bindings cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r && /usr/bin/cmake -DCUR_BIN_DIRECTORY="/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r" -DBIN_DIRECTORY="/builddir/build/BUILD/libSBML-5.17.0-Source/build" -DCUR_SRC_DIRECTORY="/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/r" -DSRC_DIRECTORY="/builddir/build/BUILD/libSBML-5.17.0-Source" -DCMAKE_COMMAND="/usr/bin/cmake" -DPYTHON_EXECUTABLE="/usr/bin/python3" -DSWIG_SWIGDOCDEFINES="" -DSWIG_ARGS="-DLIBSBML_COMPILED_IN_SRC -DUSE_LIBXML -DUSE_BZ2 -DUSE_ZLIB -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_LAYOUT -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER" -DSWIG_EXECUTABLE="/usr/bin/swig" -DLIBSBML_REMOVE_WRAPPERS=OFF -P /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/r/swig-binding.cmake [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ExternalModelDefinition.cpp [ 3%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:37: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp: In member function 'SBaseRef* SBaseRef::createSBaseRef()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:548:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp: In member function 'virtual SBase* SBaseRef::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:658:7: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:669:7: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp [ 3%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Submodel.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Submodel.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp: In member function 'virtual SBase* ListOfDeletions::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp:158:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp:39: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp: In member function 'Deletion* Submodel::createDeletion()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp:493:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp: In member function 'virtual SBase* ListOfExternalModelDefinitions::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp:151:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp [ 3%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/CompFlatteningConverter.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp: In member function 'virtual SBase* ListOfModelDefinitions::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp:151:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp: In member function 'virtual SBase* ListOfPorts::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp:150:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 3%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/SBMLFileResolver.cpp [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp: In member function 'virtual SBase* ListOfReplacedElements::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp:114:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 3%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLResolver.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLResolver.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/SBMLResolver.cpp [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp [ 3%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/SBMLResolverRegistry.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp: In member function 'virtual SBase* ListOfSubmodels::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp:150:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ModelDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ModelDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ModelDefinition.cpp [ 4%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLUri.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLUri.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/SBMLUri.cpp [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Port.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Port.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Port.cpp [ 5%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/CompConsistencyValidator.cpp [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ReplacedBy.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ReplacedBy.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ReplacedBy.cpp [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ReplacedElement.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ReplacedElement.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/ReplacedElement.cpp [ 5%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Replacing.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Replacing.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Replacing.cpp [ 5%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp [ 5%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/CompValidator.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:37: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp: In member function 'SBaseRef* SBaseRef::createSBaseRef()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:548:5: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp: In member function 'virtual SBase* SBaseRef::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:658:7: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:669:7: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Submodel.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Submodel.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp [ 5%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/ClassReplacements.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/ClassReplacements.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/ClassReplacements.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp:39: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp: In member function 'Deletion* Submodel::createDeletion()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp:493:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 5%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/CompIdBase.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLInputStream.h:232: Warning 314: 'next' is a R keyword, renaming to '_next' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r && /usr/bin/cmake -DFILENAME="/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/libSBML.R" -P /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/r/patch-swig-file.cmake -- Patched libSBML.R cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r && /usr/bin/cmake -DFILENAME="/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/r/libsbml_wrap.cpp" -P /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/r/patch-swig-file.cmake -- Patched libsbml_wrap.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 5%] Built target binding_r_swig [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/CompFlatteningConverter.cpp make -f src/bindings/java/CMakeFiles/binding_java_jar.dir/build.make src/bindings/java/CMakeFiles/binding_java_jar.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/java /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/java /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/java/CMakeFiles/binding_java_jar.dir/DependInfo.cmake --color= Scanning dependencies of target binding_java_jar make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/bindings/java/CMakeFiles/binding_java_jar.dir/build.make src/bindings/java/CMakeFiles/binding_java_jar.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 5%] Building: libsbml.jar cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/java && /usr/bin/cmake -E make_directory /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/java/test cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/java && /usr/bin/cmake -DJava_JAVAC_EXECUTABLE="/usr/bin/javac" -DJava_JAR_EXECUTABLE="/usr/bin/jar" -DBIN_DIRECTORY="/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/java" -DSRC_DIRECTORY="/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/java" -DFILE_SEP=":" -DPATH_SEP=/ -DCOMPATIBILIY=1.6 -P /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/java/compile-native-files.cmake BUILDSTDERR: Creating: libsbml.jar [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/SBMLFileResolver.cpp [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolver.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolver.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/SBMLResolver.cpp [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/SBMLResolverRegistry.cpp [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLUri.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLUri.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/SBMLUri.cpp [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/CompConsistencyValidator.cpp [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/CompValidator.cpp [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/ClassReplacements.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/ClassReplacements.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/ClassReplacements.cpp [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/CompIdBase.cpp [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp:31: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp: In member function 'void ExtModelReferenceCycles::logCycle(const Model&, std::__cxx11::string, std::__cxx11::string)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp:281:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, m.getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp:31: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp: In member function 'void SubmodelReferenceCycles::logCycle(const Model&, std::__cxx11::string, std::__cxx11::string)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp:320:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, m.getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniquePortIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniquePortIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UniquePortIds.cpp [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.cpp added manifest adding: org/sbml/libsbml/ASTBase.class(in = 12613) (out= 3664)(deflated 70%) adding: org/sbml/libsbml/ASTBasePlugin.class(in = 10538) (out= 3052)(deflated 71%) adding: org/sbml/libsbml/ASTNode.class(in = 16109) (out= 4850)(deflated 69%) adding: org/sbml/libsbml/ASTNodeList.class(in = 1591) (out= 759)(deflated 52%) adding: org/sbml/libsbml/AlgebraicRule.class(in = 1833) (out= 891)(deflated 51%) adding: org/sbml/libsbml/AssignmentRule.class(in = 2073) (out= 964)(deflated 53%) adding: org/sbml/libsbml/Association.class(in = 5587) (out= 1901)(deflated 65%) adding: org/sbml/libsbml/BindingSiteSpeciesType.class(in = 3131) (out= 1197)(deflated 61%) adding: org/sbml/libsbml/BoundingBox.class(in = 7249) (out= 2373)(deflated 67%) adding: org/sbml/libsbml/CVTerm.class(in = 4773) (out= 1725)(deflated 63%) adding: org/sbml/libsbml/CVTermList.class(in = 1573) (out= 757)(deflated 51%) adding: org/sbml/libsbml/CobraToFbcConverter.class(in = 2314) (out= 996)(deflated 56%) adding: org/sbml/libsbml/ColorDefinition.class(in = 7410) (out= 2311)(deflated 68%) adding: org/sbml/libsbml/CompBase.class(in = 1541) (out= 780)(deflated 49%) adding: org/sbml/libsbml/CompExtension.class(in = 5884) (out= 2364)(deflated 59%) adding: org/sbml/libsbml/CompFlatteningConverter.class(in = 2329) (out= 981)(deflated 57%) adding: org/sbml/libsbml/CompModelPlugin.class(in = 6844) (out= 2194)(deflated 67%) adding: org/sbml/libsbml/CompPkgNamespaces.class(in = 2403) (out= 1051)(deflated 56%) adding: org/sbml/libsbml/CompSBMLDocumentPlugin.class(in = 8041) (out= 2291)(deflated 71%) adding: org/sbml/libsbml/CompSBasePlugin.class(in = 5677) (out= 1829)(deflated 67%) adding: org/sbml/libsbml/Compartment.class(in = 6893) (out= 2203)(deflated 68%) adding: org/sbml/libsbml/CompartmentGlyph.class(in = 4976) (out= 1683)(deflated 66%) adding: org/sbml/libsbml/CompartmentReference.class(in = 4562) (out= 1551)(deflated 66%) adding: org/sbml/libsbml/CompartmentType.class(in = 3015) (out= 1193)(deflated 60%) adding: org/sbml/libsbml/Constraint.class(in = 4385) (out= 1590)(deflated 63%) adding: org/sbml/libsbml/ConversionOption.class(in = 5628) (out= 1690)(deflated 69%) adding: org/sbml/libsbml/ConversionProperties.class(in = 8189) (out= 2121)(deflated 74%) adding: org/sbml/libsbml/CubicBezier.class(in = 6224) (out= 2043)(deflated 67%) adding: org/sbml/libsbml/Curve.class(in = 4519) (out= 1735)(deflated 61%) adding: org/sbml/libsbml/Date.class(in = 4822) (out= 1836)(deflated 61%) adding: org/sbml/libsbml/DateList.class(in = 1537) (out= 754)(deflated 50%) adding: org/sbml/libsbml/DefaultTerm.class(in = 3246) (out= 1288)(deflated 60%) adding: org/sbml/libsbml/DefaultValues.class(in = 17811) (out= 4229)(deflated 76%) adding: org/sbml/libsbml/Delay.class(in = 3652) (out= 1458)(deflated 60%) adding: org/sbml/libsbml/Deletion.class(in = 3160) (out= 1280)(deflated 59%) adding: org/sbml/libsbml/Dimensions.class(in = 5207) (out= 1874)(deflated 64%) adding: org/sbml/libsbml/ElementFilter.class(in = 1717) (out= 851)(deflated 50%) adding: org/sbml/libsbml/Ellipse.class(in = 9268) (out= 2435)(deflated 73%) adding: org/sbml/libsbml/Event.class(in = 8756) (out= 2776)(deflated 68%) adding: org/sbml/libsbml/EventAssignment.class(in = 4839) (out= 1691)(deflated 65%) adding: org/sbml/libsbml/ExternalModelDefinition.class(in = 5102) (out= 1657)(deflated 67%) adding: org/sbml/libsbml/FbcAnd.class(in = 5110) (out= 1854)(deflated 63%) adding: org/sbml/libsbml/FbcAssociation.class(in = 4373) (out= 1526)(deflated 65%) adding: org/sbml/libsbml/FbcExtension.class(in = 6316) (out= 2548)(deflated 59%) adding: org/sbml/libsbml/FbcModelPlugin.class(in = 12134) (out= 3287)(deflated 72%) adding: org/sbml/libsbml/FbcOr.class(in = 5070) (out= 1852)(deflated 63%) adding: org/sbml/libsbml/FbcPkgNamespaces.class(in = 2385) (out= 1051)(deflated 55%) adding: org/sbml/libsbml/FbcReactionPlugin.class(in = 6091) (out= 1861)(deflated 69%) adding: org/sbml/libsbml/FbcSBMLDocumentPlugin.class(in = 1960) (out= 906)(deflated 53%) adding: org/sbml/libsbml/FbcSpeciesPlugin.class(in = 4767) (out= 1601)(deflated 66%) adding: org/sbml/libsbml/FbcToCobraConverter.class(in = 2144) (out= 946)(deflated 55%) adding: org/sbml/libsbml/FbcV1ToV2Converter.class(in = 2278) (out= 985)(deflated 56%) adding: org/sbml/libsbml/FbcV2ToV1Converter.class(in = 2128) (out= 946)(deflated 55%) adding: org/sbml/libsbml/FluxBound.class(in = 5100) (out= 1785)(deflated 65%) adding: org/sbml/libsbml/FluxObjective.class(in = 4785) (out= 1663)(deflated 65%) adding: org/sbml/libsbml/FunctionDefinition.class(in = 4850) (out= 1642)(deflated 66%) adding: org/sbml/libsbml/FunctionTerm.class(in = 4233) (out= 1567)(deflated 62%) adding: org/sbml/libsbml/GeneAssociation.class(in = 4684) (out= 1628)(deflated 65%) adding: org/sbml/libsbml/GeneProduct.class(in = 4633) (out= 1639)(deflated 64%) adding: org/sbml/libsbml/GeneProductAssociation.class(in = 6209) (out= 1975)(deflated 68%) adding: org/sbml/libsbml/GeneProductRef.class(in = 4689) (out= 1625)(deflated 65%) adding: org/sbml/libsbml/GeneralGlyph.class(in = 8733) (out= 2710)(deflated 68%) adding: org/sbml/libsbml/GlobalRenderInformation.class(in = 6846) (out= 2091)(deflated 69%) adding: org/sbml/libsbml/GlobalStyle.class(in = 3024) (out= 1209)(deflated 60%) adding: org/sbml/libsbml/GradientBase.class(in = 6242) (out= 2070)(deflated 66%) adding: org/sbml/libsbml/GradientStop.class(in = 4471) (out= 1631)(deflated 63%) adding: org/sbml/libsbml/GraphicalObject.class(in = 6884) (out= 2188)(deflated 68%) adding: org/sbml/libsbml/GraphicalPrimitive1D.class(in = 6101) (out= 1945)(deflated 68%) adding: org/sbml/libsbml/GraphicalPrimitive2D.class(in = 4299) (out= 1482)(deflated 65%) adding: org/sbml/libsbml/Group.class(in = 6023) (out= 2131)(deflated 64%) adding: org/sbml/libsbml/GroupsExtension.class(in = 4897) (out= 1971)(deflated 59%) adding: org/sbml/libsbml/GroupsModelPlugin.class(in = 4640) (out= 1615)(deflated 65%) adding: org/sbml/libsbml/GroupsPkgNamespaces.class(in = 2439) (out= 1053)(deflated 56%) adding: org/sbml/libsbml/ISBMLExtensionNamespaces.class(in = 1574) (out= 727)(deflated 53%) adding: org/sbml/libsbml/IdList.class(in = 1894) (out= 873)(deflated 53%) adding: org/sbml/libsbml/IdentifierTransformer.class(in = 1830) (out= 866)(deflated 52%) adding: org/sbml/libsbml/Image.class(in = 7038) (out= 2337)(deflated 66%) adding: org/sbml/libsbml/InSpeciesTypeBond.class(in = 4909) (out= 1642)(deflated 66%) adding: org/sbml/libsbml/InitialAssignment.class(in = 4899) (out= 1700)(deflated 65%) adding: org/sbml/libsbml/Input.class(in = 5282) (out= 1838)(deflated 65%) adding: org/sbml/libsbml/IntraSpeciesReaction.class(in = 3069) (out= 1189)(deflated 61%) adding: org/sbml/libsbml/KineticLaw.class(in = 9514) (out= 2895)(deflated 69%) adding: org/sbml/libsbml/L3ParserSettings.class(in = 5530) (out= 1779)(deflated 67%) adding: org/sbml/libsbml/Layout.class(in = 14495) (out= 4000)(deflated 72%) adding: org/sbml/libsbml/LayoutExtension.class(in = 7766) (out= 2949)(deflated 62%) adding: org/sbml/libsbml/LayoutModelPlugin.class(in = 3890) (out= 1390)(deflated 64%) adding: org/sbml/libsbml/LayoutPkgNamespaces.class(in = 2439) (out= 1053)(deflated 56%) adding: org/sbml/libsbml/LayoutSpeciesReferencePlugin.class(in = 1720) (out= 803)(deflated 53%) adding: org/sbml/libsbml/LineEnding.class(in = 6780) (out= 2264)(deflated 66%) adding: org/sbml/libsbml/LineSegment.class(in = 5596) (out= 1959)(deflated 64%) adding: org/sbml/libsbml/LinearGradient.class(in = 8341) (out= 2296)(deflated 72%) adding: org/sbml/libsbml/ListOf.class(in = 5126) (out= 1876)(deflated 63%) adding: org/sbml/libsbml/ListOfColorDefinitions.class(in = 4770) (out= 1596)(deflated 66%) adding: org/sbml/libsbml/ListOfCompartmentGlyphs.class(in = 3662) (out= 1340)(deflated 63%) adding: org/sbml/libsbml/ListOfCompartmentReferences.class(in = 3704) (out= 1302)(deflated 64%) adding: org/sbml/libsbml/ListOfCompartmentTypes.class(in = 3092) (out= 1173)(deflated 62%) adding: org/sbml/libsbml/ListOfCompartments.class(in = 3000) (out= 1170)(deflated 61%) adding: org/sbml/libsbml/ListOfConstraints.class(in = 2593) (out= 1092)(deflated 57%) adding: org/sbml/libsbml/ListOfCurveElements.class(in = 4949) (out= 1705)(deflated 65%) adding: org/sbml/libsbml/ListOfDeletions.class(in = 3134) (out= 1221)(deflated 61%) adding: org/sbml/libsbml/ListOfDrawables.class(in = 5551) (out= 1911)(deflated 65%) adding: org/sbml/libsbml/ListOfEventAssignments.class(in = 3347) (out= 1251)(deflated 62%) adding: org/sbml/libsbml/ListOfEvents.class(in = 2862) (out= 1162)(deflated 59%) adding: org/sbml/libsbml/ListOfExternalModelDefinitions.class(in = 3509) (out= 1241)(deflated 64%) adding: org/sbml/libsbml/ListOfFbcAssociations.class(in = 4565) (out= 1586)(deflated 65%) adding: org/sbml/libsbml/ListOfFluxBounds.class(in = 3297) (out= 1259)(deflated 61%) adding: org/sbml/libsbml/ListOfFluxObjectives.class(in = 4116) (out= 1436)(deflated 65%) adding: org/sbml/libsbml/ListOfFunctionDefinitions.class(in = 3161) (out= 1177)(deflated 62%) adding: org/sbml/libsbml/ListOfFunctionTerms.class(in = 4376) (out= 1513)(deflated 65%) adding: org/sbml/libsbml/ListOfGeneAssociations.class(in = 3453) (out= 1267)(deflated 63%) adding: org/sbml/libsbml/ListOfGeneProducts.class(in = 4034) (out= 1436)(deflated 64%) adding: org/sbml/libsbml/ListOfGlobalRenderInformation.class(in = 9180) (out= 2546)(deflated 72%) adding: org/sbml/libsbml/ListOfGlobalStyles.class(in = 4590) (out= 1591)(deflated 65%) adding: org/sbml/libsbml/ListOfGradientDefinitions.class(in = 5116) (out= 1694)(deflated 66%) adding: org/sbml/libsbml/ListOfGradientStops.class(in = 4668) (out= 1603)(deflated 65%) adding: org/sbml/libsbml/ListOfGraphicalObjects.class(in = 3791) (out= 1380)(deflated 63%) adding: org/sbml/libsbml/ListOfGroups.class(in = 3950) (out= 1463)(deflated 62%) adding: org/sbml/libsbml/ListOfInSpeciesTypeBonds.class(in = 3623) (out= 1301)(deflated 64%) adding: org/sbml/libsbml/ListOfInitialAssignments.class(in = 3395) (out= 1254)(deflated 63%) adding: org/sbml/libsbml/ListOfInputs.class(in = 3346) (out= 1295)(deflated 61%) adding: org/sbml/libsbml/ListOfLayouts.class(in = 3597) (out= 1373)(deflated 61%) adding: org/sbml/libsbml/ListOfLineEndings.class(in = 4721) (out= 1635)(deflated 65%) adding: org/sbml/libsbml/ListOfLineSegments.class(in = 3152) (out= 1262)(deflated 59%) adding: org/sbml/libsbml/ListOfLocalParameters.class(in = 3697) (out= 1313)(deflated 64%) adding: org/sbml/libsbml/ListOfLocalRenderInformation.class(in = 8521) (out= 2403)(deflated 71%) adding: org/sbml/libsbml/ListOfLocalStyles.class(in = 4545) (out= 1590)(deflated 65%) adding: org/sbml/libsbml/ListOfMembers.class(in = 5114) (out= 1763)(deflated 65%) adding: org/sbml/libsbml/ListOfModelDefinitions.class(in = 3309) (out= 1227)(deflated 62%) adding: org/sbml/libsbml/ListOfMultiSpeciesTypes.class(in = 3543) (out= 1295)(deflated 63%) adding: org/sbml/libsbml/ListOfObjectives.class(in = 5192) (out= 1717)(deflated 66%) adding: org/sbml/libsbml/ListOfOutputs.class(in = 3373) (out= 1296)(deflated 61%) adding: org/sbml/libsbml/ListOfOutwardBindingSites.class(in = 3650) (out= 1301)(deflated 64%) adding: org/sbml/libsbml/ListOfParameters.class(in = 2954) (out= 1166)(deflated 60%) adding: org/sbml/libsbml/ListOfPorts.class(in = 3278) (out= 1299)(deflated 60%) adding: org/sbml/libsbml/ListOfPossibleSpeciesFeatureValues.class(in = 3893) (out= 1313)(deflated 66%) adding: org/sbml/libsbml/ListOfQualitativeSpecies.class(in = 3361) (out= 1236)(deflated 63%) adding: org/sbml/libsbml/ListOfReactionGlyphs.class(in = 3581) (out= 1337)(deflated 62%) adding: org/sbml/libsbml/ListOfReactions.class(in = 2878) (out= 1153)(deflated 59%) adding: org/sbml/libsbml/ListOfReferenceGlyphs.class(in = 3608) (out= 1342)(deflated 62%) adding: org/sbml/libsbml/ListOfReplacedElements.class(in = 2905) (out= 1164)(deflated 59%) adding: org/sbml/libsbml/ListOfRules.class(in = 2943) (out= 1190)(deflated 59%) adding: org/sbml/libsbml/ListOfSpecies.class(in = 2888) (out= 1165)(deflated 59%) adding: org/sbml/libsbml/ListOfSpeciesFeatureTypes.class(in = 3650) (out= 1297)(deflated 64%) adding: org/sbml/libsbml/ListOfSpeciesFeatureValues.class(in = 3677) (out= 1300)(deflated 64%) adding: org/sbml/libsbml/ListOfSpeciesFeatures.class(in = 5453) (out= 1695)(deflated 68%) adding: org/sbml/libsbml/ListOfSpeciesGlyphs.class(in = 3554) (out= 1333)(deflated 62%) adding: org/sbml/libsbml/ListOfSpeciesReferenceGlyphs.class(in = 3797) (out= 1352)(deflated 64%) adding: org/sbml/libsbml/ListOfSpeciesReferences.class(in = 3187) (out= 1202)(deflated 62%) adding: org/sbml/libsbml/ListOfSpeciesTypeComponentIndexes.class(in = 3705) (out= 1275)(deflated 65%) adding: org/sbml/libsbml/ListOfSpeciesTypeComponentMapInProducts.class(in = 4028) (out= 1317)(deflated 67%) adding: org/sbml/libsbml/ListOfSpeciesTypeInstances.class(in = 3677) (out= 1298)(deflated 64%) adding: org/sbml/libsbml/ListOfSpeciesTypes.class(in = 3000) (out= 1167)(deflated 61%) adding: org/sbml/libsbml/ListOfSubmodels.class(in = 3134) (out= 1224)(deflated 60%) adding: org/sbml/libsbml/ListOfTextGlyphs.class(in = 3473) (out= 1335)(deflated 61%) adding: org/sbml/libsbml/ListOfTransitions.class(in = 3327) (out= 1255)(deflated 62%) adding: org/sbml/libsbml/ListOfUnitDefinitions.class(in = 3323) (out= 1246)(deflated 62%) adding: org/sbml/libsbml/ListOfUnits.class(in = 2479) (out= 1087)(deflated 56%) adding: org/sbml/libsbml/LocalParameter.class(in = 3273) (out= 1250)(deflated 61%) adding: org/sbml/libsbml/LocalRenderInformation.class(in = 6927) (out= 2109)(deflated 69%) adding: org/sbml/libsbml/LocalStyle.class(in = 4169) (out= 1561)(deflated 62%) adding: org/sbml/libsbml/MathFilter.class(in = 1180) (out= 660)(deflated 44%) adding: org/sbml/libsbml/MathML.class(in = 1286) (out= 694)(deflated 46%) adding: org/sbml/libsbml/Member.class(in = 4572) (out= 1689)(deflated 63%) adding: org/sbml/libsbml/Model.class(in = 35601) (out= 9229)(deflated 74%) adding: org/sbml/libsbml/ModelCreator.class(in = 5096) (out= 1716)(deflated 66%) adding: org/sbml/libsbml/ModelCreatorList.class(in = 1681) (out= 762)(deflated 54%) adding: org/sbml/libsbml/ModelDefinition.class(in = 2707) (out= 1111)(deflated 58%) adding: org/sbml/libsbml/ModelHistory.class(in = 4260) (out= 1534)(deflated 63%) adding: org/sbml/libsbml/ModifierSpeciesReference.class(in = 2183) (out= 967)(deflated 55%) adding: org/sbml/libsbml/MultiASTPlugin.class(in = 5653) (out= 1792)(deflated 68%) adding: org/sbml/libsbml/MultiCompartmentPlugin.class(in = 5989) (out= 1814)(deflated 69%) adding: org/sbml/libsbml/MultiExtension.class(in = 7320) (out= 2847)(deflated 61%) adding: org/sbml/libsbml/MultiListOfReactionsPlugin.class(in = 2446) (out= 1015)(deflated 58%) adding: org/sbml/libsbml/MultiModelPlugin.class(in = 4882) (out= 1632)(deflated 66%) adding: org/sbml/libsbml/MultiPkgNamespaces.class(in = 2421) (out= 1052)(deflated 56%) adding: org/sbml/libsbml/MultiSBMLDocumentPlugin.class(in = 1994) (out= 909)(deflated 54%) adding: org/sbml/libsbml/MultiSimpleSpeciesReferencePlugin.class(in = 3873) (out= 1286)(deflated 66%) adding: org/sbml/libsbml/MultiSpeciesPlugin.class(in = 8318) (out= 2323)(deflated 72%) adding: org/sbml/libsbml/MultiSpeciesReferencePlugin.class(in = 5222) (out= 1584)(deflated 69%) adding: org/sbml/libsbml/MultiSpeciesType.class(in = 11919) (out= 3139)(deflated 73%) adding: org/sbml/libsbml/OFStream.class(in = 1741) (out= 830)(deflated 52%) adding: org/sbml/libsbml/OStream.class(in = 1457) (out= 799)(deflated 45%) adding: org/sbml/libsbml/OStringStream.class(in = 1283) (out= 682)(deflated 46%) adding: org/sbml/libsbml/Objective.class(in = 6124) (out= 2051)(deflated 66%) adding: org/sbml/libsbml/Output.class(in = 4964) (out= 1748)(deflated 64%) adding: org/sbml/libsbml/OutwardBindingSite.class(in = 5099) (out= 1684)(deflated 66%) adding: org/sbml/libsbml/Parameter.class(in = 4878) (out= 1744)(deflated 64%) adding: org/sbml/libsbml/Point.class(in = 5465) (out= 1969)(deflated 63%) adding: org/sbml/libsbml/Polygon.class(in = 5278) (out= 1921)(deflated 63%) adding: org/sbml/libsbml/Port.class(in = 3665) (out= 1459)(deflated 60%) adding: org/sbml/libsbml/PossibleSpeciesFeatureValue.class(in = 4836) (out= 1575)(deflated 67%) adding: org/sbml/libsbml/Priority.class(in = 3365) (out= 1353)(deflated 59%) adding: org/sbml/libsbml/QualExtension.class(in = 5334) (out= 2188)(deflated 58%) adding: org/sbml/libsbml/QualModelPlugin.class(in = 6593) (out= 2037)(deflated 69%) adding: org/sbml/libsbml/QualPkgNamespaces.class(in = 2403) (out= 1051)(deflated 56%) adding: org/sbml/libsbml/QualitativeSpecies.class(in = 5893) (out= 1861)(deflated 68%) adding: org/sbml/libsbml/RDFAnnotationParser.class(in = 5017) (out= 1521)(deflated 69%) adding: org/sbml/libsbml/RadialGradient.class(in = 8933) (out= 2426)(deflated 72%) adding: org/sbml/libsbml/RateRule.class(in = 1989) (out= 958)(deflated 51%) adding: org/sbml/libsbml/Reaction.class(in = 11763) (out= 3312)(deflated 71%) adding: org/sbml/libsbml/ReactionGlyph.class(in = 7761) (out= 2463)(deflated 68%) adding: org/sbml/libsbml/Rectangle.class(in = 9619) (out= 2670)(deflated 72%) adding: org/sbml/libsbml/ReferenceGlyph.class(in = 6368) (out= 2143)(deflated 66%) adding: org/sbml/libsbml/RelAbsVector.class(in = 3786) (out= 1332)(deflated 64%) adding: org/sbml/libsbml/RenderCubicBezier.class(in = 9618) (out= 2415)(deflated 74%) adding: org/sbml/libsbml/RenderCurve.class(in = 6765) (out= 2283)(deflated 66%) adding: org/sbml/libsbml/RenderExtension.class(in = 7959) (out= 3059)(deflated 61%) adding: org/sbml/libsbml/RenderGraphicalObjectPlugin.class(in = 3417) (out= 1199)(deflated 64%) adding: org/sbml/libsbml/RenderGroup.class(in = 12819) (out= 3681)(deflated 71%) adding: org/sbml/libsbml/RenderInformationBase.class(in = 12839) (out= 3328)(deflated 74%) adding: org/sbml/libsbml/RenderLayoutPlugin.class(in = 5038) (out= 1621)(deflated 67%) adding: org/sbml/libsbml/RenderListOfLayoutsPlugin.class(in = 4953) (out= 1557)(deflated 68%) adding: org/sbml/libsbml/RenderPkgNamespaces.class(in = 2439) (out= 1053)(deflated 56%) adding: org/sbml/libsbml/RenderPoint.class(in = 6931) (out= 2130)(deflated 69%) adding: org/sbml/libsbml/ReplacedBy.class(in = 2711) (out= 1154)(deflated 57%) adding: org/sbml/libsbml/ReplacedElement.class(in = 4136) (out= 1484)(deflated 64%) adding: org/sbml/libsbml/Replacing.class(in = 2454) (out= 1018)(deflated 58%) adding: org/sbml/libsbml/Rule.class(in = 5603) (out= 2032)(deflated 63%) adding: org/sbml/libsbml/SBMLConstructorException.class(in = 1861) (out= 836)(deflated 55%) adding: org/sbml/libsbml/SBMLConverter.class(in = 4793) (out= 1649)(deflated 65%) adding: org/sbml/libsbml/SBMLConverterRegistry.class(in = 2188) (out= 889)(deflated 59%) adding: org/sbml/libsbml/SBMLDocument.class(in = 13286) (out= 3833)(deflated 71%) adding: org/sbml/libsbml/SBMLDocumentPlugin.class(in = 2433) (out= 1028)(deflated 57%) adding: org/sbml/libsbml/SBMLError.class(in = 2561) (out= 1017)(deflated 60%) adding: org/sbml/libsbml/SBMLErrorLog.class(in = 6193) (out= 1879)(deflated 69%) adding: org/sbml/libsbml/SBMLExtension.class(in = 5506) (out= 1826)(deflated 66%) adding: org/sbml/libsbml/SBMLExtensionException.class(in = 982) (out= 580)(deflated 40%) adding: org/sbml/libsbml/SBMLExtensionRegistry.class(in = 4294) (out= 1474)(deflated 65%) adding: org/sbml/libsbml/SBMLExternalValidator.class(in = 2954) (out= 1111)(deflated 62%) adding: org/sbml/libsbml/SBMLFileResolver.class(in = 2733) (out= 1076)(deflated 60%) adding: org/sbml/libsbml/SBMLFunctionDefinitionConverter.class(in = 2336) (out= 952)(deflated 59%) adding: org/sbml/libsbml/SBMLIdConverter.class(in = 2080) (out= 937)(deflated 54%) adding: org/sbml/libsbml/SBMLInferUnitsConverter.class(in = 2208) (out= 948)(deflated 57%) adding: org/sbml/libsbml/SBMLInitialAssignmentConverter.class(in = 2320) (out= 957)(deflated 58%) adding: org/sbml/libsbml/SBMLLevel1Version1Converter.class(in = 2272) (out= 953)(deflated 58%) adding: org/sbml/libsbml/SBMLLevelVersionConverter.class(in = 2779) (out= 1078)(deflated 61%) adding: org/sbml/libsbml/SBMLLocalParameterConverter.class(in = 2272) (out= 953)(deflated 58%) adding: org/sbml/libsbml/SBMLNamespaces.class(in = 5740) (out= 1964)(deflated 65%) adding: org/sbml/libsbml/SBMLNamespacesList.class(in = 1717) (out= 767)(deflated 55%) adding: org/sbml/libsbml/SBMLReactionConverter.class(in = 2486) (out= 1012)(deflated 59%) adding: org/sbml/libsbml/SBMLReader.class(in = 1939) (out= 959)(deflated 50%) adding: org/sbml/libsbml/SBMLResolver.class(in = 3186) (out= 1232)(deflated 61%) adding: org/sbml/libsbml/SBMLResolverRegistry.class(in = 3368) (out= 1204)(deflated 64%) adding: org/sbml/libsbml/SBMLRuleConverter.class(in = 2112) (out= 941)(deflated 55%) adding: org/sbml/libsbml/SBMLStripPackageConverter.class(in = 2660) (out= 1051)(deflated 60%) adding: org/sbml/libsbml/SBMLTransforms.class(in = 3702) (out= 1250)(deflated 66%) adding: org/sbml/libsbml/SBMLUnitsConverter.class(in = 2128) (out= 942)(deflated 55%) adding: org/sbml/libsbml/SBMLUri.class(in = 1947) (out= 909)(deflated 53%) adding: org/sbml/libsbml/SBMLValidator.class(in = 4430) (out= 1640)(deflated 62%) adding: org/sbml/libsbml/SBMLWriter.class(in = 2909) (out= 1195)(deflated 58%) adding: org/sbml/libsbml/SBO.class(in = 4172) (out= 1566)(deflated 62%) adding: org/sbml/libsbml/SBase.class(in = 19402) (out= 5521)(deflated 71%) adding: org/sbml/libsbml/SBaseExtensionPoint.class(in = 2363) (out= 959)(deflated 59%) adding: org/sbml/libsbml/SBaseList.class(in = 1555) (out= 755)(deflated 51%) adding: org/sbml/libsbml/SBasePlugin.class(in = 7122) (out= 2337)(deflated 67%) adding: org/sbml/libsbml/SBaseRef.class(in = 6427) (out= 2158)(deflated 66%) adding: org/sbml/libsbml/SWIGTYPE_p_ASTFunction.class(in = 480) (out= 316)(deflated 34%) adding: org/sbml/libsbml/SWIGTYPE_p_ExpectedAttributes.class(in = 501) (out= 320)(deflated 36%) adding: org/sbml/libsbml/SWIGTYPE_p_FormulaUnitsData.class(in = 495) (out= 318)(deflated 35%) adding: org/sbml/libsbml/SWIGTYPE_p_List.class(in = 459) (out= 309)(deflated 32%) adding: org/sbml/libsbml/SWIGTYPE_p_PrefixTransformer.class(in = 498) (out= 319)(deflated 35%) adding: org/sbml/libsbml/SWIGTYPE_p_StringBuffer_t.class(in = 489) (out= 317)(deflated 35%) adding: org/sbml/libsbml/SWIGTYPE_p_double.class(in = 465) (out= 309)(deflated 33%) adding: org/sbml/libsbml/SWIGTYPE_p_f_p_Model_p_SBMLErrorLog_p_void__int.class(in = 555) (out= 332)(deflated 40%) adding: org/sbml/libsbml/SWIGTYPE_p_int.class(in = 456) (out= 307)(deflated 32%) adding: org/sbml/libsbml/SWIGTYPE_p_packageErrorTableEntry.class(in = 513) (out= 319)(deflated 37%) adding: org/sbml/libsbml/SWIGTYPE_p_packageErrorTableEntryV2.class(in = 519) (out= 321)(deflated 38%) adding: org/sbml/libsbml/SWIGTYPE_p_std__ostream.class(in = 483) (out= 315)(deflated 34%) adding: org/sbml/libsbml/SWIGTYPE_p_std__vectorT_XMLError_p_t.class(in = 522) (out= 323)(deflated 38%) adding: org/sbml/libsbml/SWIGTYPE_p_std__vectorT_std__string_t.class(in = 525) (out= 321)(deflated 38%) adding: org/sbml/libsbml/SWIGTYPE_p_std__vectorT_unsigned_int_t.class(in = 528) (out= 326)(deflated 38%) adding: org/sbml/libsbml/SWIGTYPE_p_void.class(in = 459) (out= 309)(deflated 32%) adding: org/sbml/libsbml/SimpleSpeciesReference.class(in = 2764) (out= 995)(deflated 64%) adding: org/sbml/libsbml/Species.class(in = 8744) (out= 2613)(deflated 70%) adding: org/sbml/libsbml/SpeciesFeature.class(in = 7339) (out= 2270)(deflated 69%) adding: org/sbml/libsbml/SpeciesFeatureType.class(in = 6593) (out= 2017)(deflated 69%) adding: org/sbml/libsbml/SpeciesFeatureValue.class(in = 3698) (out= 1355)(deflated 63%) adding: org/sbml/libsbml/SpeciesGlyph.class(in = 4333) (out= 1540)(deflated 64%) adding: org/sbml/libsbml/SpeciesReference.class(in = 5424) (out= 1750)(deflated 67%) adding: org/sbml/libsbml/SpeciesReferenceGlyph.class(in = 7030) (out= 2234)(deflated 68%) adding: org/sbml/libsbml/SpeciesType.class(in = 2911) (out= 1185)(deflated 59%) adding: org/sbml/libsbml/SpeciesTypeComponentIndex.class(in = 5261) (out= 1670)(deflated 68%) adding: org/sbml/libsbml/SpeciesTypeComponentMapInProduct.class(in = 6092) (out= 1769)(deflated 70%) adding: org/sbml/libsbml/SpeciesTypeInstance.class(in = 5049) (out= 1653)(deflated 67%) adding: org/sbml/libsbml/StoichiometryMath.class(in = 4012) (out= 1478)(deflated 63%) adding: org/sbml/libsbml/StringSet.class(in = 1985) (out= 858)(deflated 56%) adding: org/sbml/libsbml/Style.class(in = 5745) (out= 2036)(deflated 64%) adding: org/sbml/libsbml/SubListOfSpeciesFeatures.class(in = 6190) (out= 1884)(deflated 69%) adding: org/sbml/libsbml/Submodel.class(in = 9914) (out= 3063)(deflated 69%) adding: org/sbml/libsbml/SyntaxChecker.class(in = 2141) (out= 931)(deflated 56%) adding: org/sbml/libsbml/Text.class(in = 10196) (out= 3021)(deflated 70%) adding: org/sbml/libsbml/TextGlyph.class(in = 4951) (out= 1713)(deflated 65%) adding: org/sbml/libsbml/Transformation.class(in = 4844) (out= 1687)(deflated 65%) adding: org/sbml/libsbml/Transformation2D.class(in = 3758) (out= 1418)(deflated 62%) adding: org/sbml/libsbml/Transition.class(in = 10816) (out= 3197)(deflated 70%) adding: org/sbml/libsbml/Trigger.class(in = 4301) (out= 1609)(deflated 62%) adding: org/sbml/libsbml/Unit.class(in = 8221) (out= 2746)(deflated 66%) adding: org/sbml/libsbml/UnitDefinition.class(in = 8699) (out= 2621)(deflated 69%) adding: org/sbml/libsbml/XMLAttributes.class(in = 6024) (out= 1773)(deflated 70%) adding: org/sbml/libsbml/XMLConstructorException.class(in = 1151) (out= 647)(deflated 43%) adding: org/sbml/libsbml/XMLError.class(in = 4410) (out= 1659)(deflated 62%) adding: org/sbml/libsbml/XMLErrorLog.class(in = 4265) (out= 1572)(deflated 63%) adding: org/sbml/libsbml/XMLInputStream.class(in = 4728) (out= 1590)(deflated 66%) adding: org/sbml/libsbml/XMLNamespaces.class(in = 4132) (out= 1457)(deflated 64%) adding: org/sbml/libsbml/XMLNode.class(in = 8021) (out= 2410)(deflated 69%) adding: org/sbml/libsbml/XMLOutputStream.class(in = 9120) (out= 2523)(deflated 72%) adding: org/sbml/libsbml/XMLOwningOutputFileStream.class(in = 1990) (out= 791)(deflated 60%) adding: org/sbml/libsbml/XMLOwningOutputStringStream.class(in = 1701) (out= 741)(deflated 56%) adding: org/sbml/libsbml/XMLToken.class(in = 12798) (out= 3356)(deflated 73%) adding: org/sbml/libsbml/XMLTriple.class(in = 2461) (out= 1085)(deflated 55%) adding: org/sbml/libsbml/double_array.class(in = 1701) (out= 846)(deflated 50%) adding: org/sbml/libsbml/int_array.class(in = 1650) (out= 837)(deflated 49%) adding: org/sbml/libsbml/libsbml.class(in = 20155) (out= 6855)(deflated 65%) adding: org/sbml/libsbml/libsbmlConstants.class(in = 66783) (out= 21730)(deflated 67%) adding: org/sbml/libsbml/libsbmlJNI.class(in = 448179) (out= 83442)(deflated 81%) BUILDSTDERR: /usr/bin/javac BUILDSTDERR: -cp /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/java/libsbmlj.jar:/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/java BUILDSTDERR: -source;1.6;-target;1.6 BUILDSTDERR: -d /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/java/test BUILDSTDERR: test/org/sbml/libsbml/test/annotation/TestCVTerms.java;test/org/sbml/libsbml/test/annotation/TestCVTerms_newSetters.java;test/org/sbml/libsbml/test/annotation/TestCopyAndClone.java;test/org/sbml/libsbml/test/annotation/TestDate_newSetters.java;test/org/sbml/libsbml/test/annotation/TestL3ModelHistory.java;test/org/sbml/libsbml/test/annotation/TestModelCreator_newSetters.java;test/org/sbml/libsbml/test/annotation/TestModelHistory.java;test/org/sbml/libsbml/test/annotation/TestModelHistory_newSetters.java;test/org/sbml/libsbml/test/annotation/TestRDFAnnotation.java;test/org/sbml/libsbml/test/annotation/TestRDFAnnotation2.java;test/org/sbml/libsbml/test/annotation/TestRDFAnnotationC.java;test/org/sbml/libsbml/test/annotation/TestValidation.java;test/org/sbml/libsbml/test/math/TestASTNode.java;test/org/sbml/libsbml/test/math/TestReadFromFile1.java;test/org/sbml/libsbml/test/math/TestReadFromFile2.java;test/org/sbml/libsbml/test/math/TestReadMathML.java;test/org/sbml/libsbml/test/math/TestValidASTNode.java;test/org/sbml/libsbml/test/math/TestWriteMathML.java;test/org/sbml/libsbml/test/sbml/TestAlgebraicRule.java;test/org/sbml/libsbml/test/sbml/TestAncestor.java;test/org/sbml/libsbml/test/sbml/TestAssignmentRule.java;test/org/sbml/libsbml/test/sbml/TestCompartment.java;test/org/sbml/libsbml/test/sbml/TestCompartmentType.java;test/org/sbml/libsbml/test/sbml/TestCompartmentType_newSetters.java;test/org/sbml/libsbml/test/sbml/TestCompartmentVolumeRule.java;test/org/sbml/libsbml/test/sbml/TestCompartment_newSetters.java;test/org/sbml/libsbml/test/sbml/TestConsistencyChecks.java;test/org/sbml/libsbml/test/sbml/TestConstraint.java;test/org/sbml/libsbml/test/sbml/TestConstraint_newSetters.java;test/org/sbml/libsbml/test/sbml/TestCopyAndClone.java;test/org/sbml/libsbml/test/sbml/TestDelay.java;test/org/sbml/libsbml/test/sbml/TestEvent.java;test/org/sbml/libsbml/test/sbml/TestEventAssignment.java;test/org/sbml/libsbml/test/sbml/TestEventAssignment_newSetters.java;test/org/sbml/libsbml/test/sbml/TestEvent_newSetters.java;test/org/sbml/libsbml/test/sbml/TestFunctionDefinition.java;test/org/sbml/libsbml/test/sbml/TestFunctionDefinition_newSetters.java;test/org/sbml/libsbml/test/sbml/TestGetMultipleObjects.java;test/org/sbml/libsbml/test/sbml/TestInitialAssignment.java;test/org/sbml/libsbml/test/sbml/TestInitialAssignment_newSetters.java;test/org/sbml/libsbml/test/sbml/TestInternalConsistencyChecks.java;test/org/sbml/libsbml/test/sbml/TestKineticLaw.java;test/org/sbml/libsbml/test/sbml/TestKineticLaw_newSetters.java;test/org/sbml/libsbml/test/sbml/TestL3Compartment.java;test/org/sbml/libsbml/test/sbml/TestL3Event.java;test/org/sbml/libsbml/test/sbml/TestL3KineticLaw.java;test/org/sbml/libsbml/test/sbml/TestL3LocalParameter.java;test/org/sbml/libsbml/test/sbml/TestL3Model.java;test/org/sbml/libsbml/test/sbml/TestL3Parameter.java;test/org/sbml/libsbml/test/sbml/TestL3Reaction.java;test/org/sbml/libsbml/test/sbml/TestL3Species.java;test/org/sbml/libsbml/test/sbml/TestL3SpeciesReference.java;test/org/sbml/libsbml/test/sbml/TestL3Trigger.java;test/org/sbml/libsbml/test/sbml/TestL3Unit.java;test/org/sbml/libsbml/test/sbml/TestListOf.java;test/org/sbml/libsbml/test/sbml/TestModel.java;test/org/sbml/libsbml/test/sbml/TestModel_newSetters.java;test/org/sbml/libsbml/test/sbml/TestModifierSpeciesReference.java;test/org/sbml/libsbml/test/sbml/TestParameter.java;test/org/sbml/libsbml/test/sbml/TestParameterRule.java;test/org/sbml/libsbml/test/sbml/TestParameter_newSetters.java;test/org/sbml/libsbml/test/sbml/TestPriority.java;test/org/sbml/libsbml/test/sbml/TestRateRule.java;test/org/sbml/libsbml/test/sbml/TestReaction.java;test/org/sbml/libsbml/test/sbml/TestReaction_newSetters.java;test/org/sbml/libsbml/test/sbml/TestReadFromFile1.java;test/org/sbml/libsbml/test/sbml/TestReadFromFile2.java;test/org/sbml/libsbml/test/sbml/TestReadFromFile3.java;test/org/sbml/libsbml/test/sbml/TestReadFromFile4.java;test/org/sbml/libsbml/test/sbml/TestReadFromFile5.java;test/org/sbml/libsbml/test/sbml/TestReadFromFile6.java;test/org/sbml/libsbml/test/sbml/TestReadFromFile7.java;test/org/sbml/libsbml/test/sbml/TestReadFromFile8.java;test/org/sbml/libsbml/test/sbml/TestReadFromFile9.java;test/org/sbml/libsbml/test/sbml/TestReadSBML.java;test/org/sbml/libsbml/test/sbml/TestRequiredAttributes.java;test/org/sbml/libsbml/test/sbml/TestRequiredElements.java;test/org/sbml/libsbml/test/sbml/TestRule.java;test/org/sbml/libsbml/test/sbml/TestRule_newSetters.java;test/org/sbml/libsbml/test/sbml/TestSBMLConstructorException.java;test/org/sbml/libsbml/test/sbml/TestSBMLConvert.java;test/org/sbml/libsbml/test/sbml/TestSBMLConvertStrict.java;test/org/sbml/libsbml/test/sbml/TestSBMLDocument.java;test/org/sbml/libsbml/test/sbml/TestSBMLError.java;test/org/sbml/libsbml/test/sbml/TestSBMLNamespaces.java;test/org/sbml/libsbml/test/sbml/TestSBMLParentObject.java;test/org/sbml/libsbml/test/sbml/TestSBMLTransforms.java;test/org/sbml/libsbml/test/sbml/TestSBase.java;test/org/sbml/libsbml/test/sbml/TestSBase_newSetters.java;test/org/sbml/libsbml/test/sbml/TestSpecies.java;test/org/sbml/libsbml/test/sbml/TestSpeciesConcentrationRule.java;test/org/sbml/libsbml/test/sbml/TestSpeciesReference.java;test/org/sbml/libsbml/test/sbml/TestSpeciesReference_newSetters.java;test/org/sbml/libsbml/test/sbml/TestSpeciesType.java;test/org/sbml/libsbml/test/sbml/TestSpeciesType_newSetters.java;test/org/sbml/libsbml/test/sbml/TestSpecies_newSetters.java;test/org/sbml/libsbml/test/sbml/TestStoichiometryMath.java;test/org/sbml/libsbml/test/sbml/TestSyntaxChecker.java;test/org/sbml/libsbml/test/sbml/TestTrigger.java;test/org/sbml/libsbml/test/sbml/TestUnit.java;test/org/sbml/libsbml/test/sbml/TestUnitDefinition.java;test/org/sbml/libsbml/test/sbml/TestUnitDefinition_newSetters.java;test/org/sbml/libsbml/test/sbml/TestUnitKind.java;test/org/sbml/libsbml/test/sbml/TestUnit_newSetters.java;test/org/sbml/libsbml/test/sbml/TestWriteL3SBML.java;test/org/sbml/libsbml/test/sbml/TestWriteSBML.java;test/org/sbml/libsbml/test/xml/TestCopyAndClone.java;test/org/sbml/libsbml/test/xml/TestXMLAttributes.java;test/org/sbml/libsbml/test/xml/TestXMLAttributesC.java;test/org/sbml/libsbml/test/xml/TestXMLError.java;test/org/sbml/libsbml/test/xml/TestXMLErrorC.java;test/org/sbml/libsbml/test/xml/TestXMLNamespaces.java;test/org/sbml/libsbml/test/xml/TestXMLNode.java;test/org/sbml/libsbml/test/xml/TestXMLNode_newSetters.java;test/org/sbml/libsbml/test/xml/TestXMLOutputStream.java;test/org/sbml/libsbml/test/xml/TestXMLToken.java;test/org/sbml/libsbml/test/xml/TestXMLToken_newSetters.java;test/org/sbml/libsbml/test/xml/TestXMLTriple.java;/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/java/AutoTestRunner.java;/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/java/TestPrintVersion.java [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp BUILDSTDERR: warning: [options] bootstrap class path not set in conjunction with -source 1.6 BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.h:141, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'virtual SBase* FbcModelPlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:193:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'FluxBound* FbcModelPlugin::createFluxBound()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:829:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'Objective* FbcModelPlugin::createObjective()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:1094:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'GeneProduct* FbcModelPlugin::createGeneProduct()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:1274:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'GeneAssociation* FbcModelPlugin::createGeneAssociation()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:1481:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp: In member function 'virtual SBase* FbcReactionPlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:144:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp: In member function 'GeneProductAssociation* FbcReactionPlugin::createGeneProductAssociation()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:442:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python && /usr/bin/cmake -E rename pydoc.i pydoc-doxygen.i cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python && /usr/bin/cmake -E rename libsbml.py libsbml-doxygen.py cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python && /usr/bin/cmake -E rename pydoc-normal.i pydoc.i cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python && /usr/bin/swig -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/../swig/ -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/include -c++ -python -DLIBSBML_COMPILED_IN_SRC -DUSE_LIBXML -DUSE_BZ2 -DUSE_ZLIB -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_LAYOUT -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -o /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python/libsbml_wrap.cpp /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/libsbml.i [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Association.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Association.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Association.cpp [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/../swig/std_set.i:65: Warning 314: 'del' is a python keyword, renaming to '_del' BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp: In member function 'FbcAnd* FbcAnd::createAnd()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:296:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp: In member function 'FbcOr* FbcAnd::createOr()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:333:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp: In member function 'GeneProductRef* FbcAnd::createGeneProductRef()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:370:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.h:101, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'FbcAnd* ListOfFbcAssociations::createAnd()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:939:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'FbcOr* ListOfFbcAssociations::createOr()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:976:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'GeneProductRef* ListOfFbcAssociations::createGeneProductRef()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1013:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'virtual SBase* ListOfFbcAssociations::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1109:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1117:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1125:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1133:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp: In member function 'FbcAnd* FbcOr::createAnd()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:308:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp: In member function 'FbcOr* FbcOr::createOr()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:345:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp: In member function 'GeneProductRef* FbcOr::createGeneProductRef()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:382:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxBound.h:122, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp: In member function 'virtual SBase* ListOfFluxBounds::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp:1174:7: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.h:89, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp:37: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp: In member function 'FluxObjective* ListOfFluxObjectives::createFluxObjective()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp:1096:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp: In member function 'virtual SBase* ListOfFluxObjectives::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp:1192:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp:37: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp: In member function 'Association* GeneAssociation::createAssociation()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp:346:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp: In member function 'virtual SBase* ListOfGeneAssociations::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp:695:7: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.h:85, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp: In member function 'GeneProduct* ListOfGeneProducts::createGeneProduct()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp:1094:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp: In member function 'virtual SBase* ListOfGeneProducts::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp:1190:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:92, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual FbcAnd* GeneProductAssociation::createAnd()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:208:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual FbcOr* GeneProductAssociation::createOr()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:223:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual GeneProductRef* GeneProductAssociation::createGeneProductRef()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:238:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual SBase* GeneProductAssociation::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:923:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductRef.cpp [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Objective.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Objective.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.h:130, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:37: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp: In member function 'FluxObjective* Objective::createFluxObjective()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:468:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp: In member function 'Objective* ListOfObjectives::createObjective()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:1370:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp: In member function 'virtual SBase* ListOfObjectives::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:1489:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/util/CobraToFbcConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/util/CobraToFbcConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util/CobraToFbcConverter.cpp [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcToCobraConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcToCobraConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util/FbcToCobraConverter.cpp [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcV1ToV2Converter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcV1ToV2Converter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util/FbcV1ToV2Converter.cpp BUILDSTDERR: 1 warning make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 8%] Built target binding_java_jar [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp [ 8%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp [ 8%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp:31: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp: In member function 'void ExtModelReferenceCycles::logCycle(const Model&, std::__cxx11::string, std::__cxx11::string)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp:281:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, m.getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp [ 8%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp:31: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp: In member function 'void SubmodelReferenceCycles::logCycle(const Model&, std::__cxx11::string, std::__cxx11::string)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/CompExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp:320:3: note: in expansion of macro 'COMP_CREATE_NS' BUILDSTDERR: COMP_CREATE_NS(compns, m.getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 8%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/FbcValidator.cpp [ 9%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp [ 9%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp [ 10%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniquePortIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniquePortIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UniquePortIds.cpp [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp [ 10%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.cpp [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp [ 10%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp [ 10%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.h:48, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp: In member function 'Group* GroupsModelPlugin::createGroup()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp:229:5: note: in expansion of macro 'GROUPS_CREATE_NS' BUILDSTDERR: GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/sbml/Group.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/sbml/Group.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Group.cpp [ 10%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.cpp [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Group.h:160, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Group.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Group.cpp: In member function 'Member* Group::createMember()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Group.cpp:461:5: note: in expansion of macro 'GROUPS_CREATE_NS' BUILDSTDERR: GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.h:68, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp: In member function 'Group* ListOfGroups::createGroup()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp:243:5: note: in expansion of macro 'GROUPS_CREATE_NS' BUILDSTDERR: GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp: In member function 'virtual SBase* ListOfGroups::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp:303:3: note: in expansion of macro 'GROUPS_CREATE_NS' BUILDSTDERR: GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 10%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp [ 10%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.h:141, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'virtual SBase* FbcModelPlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:193:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'FluxBound* FbcModelPlugin::createFluxBound()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:829:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'Objective* FbcModelPlugin::createObjective()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:1094:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'GeneProduct* FbcModelPlugin::createGeneProduct()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:1274:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'GeneAssociation* FbcModelPlugin::createGeneAssociation()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:1481:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp: In member function 'virtual SBase* FbcReactionPlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:144:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp: In member function 'GeneProductAssociation* FbcReactionPlugin::createGeneProductAssociation()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:442:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.h:96, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp: In member function 'Member* ListOfMembers::createMember()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp:343:5: note: in expansion of macro 'GROUPS_CREATE_NS' BUILDSTDERR: GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp: In member function 'virtual SBase* ListOfMembers::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp:454:3: note: in expansion of macro 'GROUPS_CREATE_NS' BUILDSTDERR: GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/sbml/Member.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/sbml/Member.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Member.cpp [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp [ 10%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp [ 10%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/GroupsValidator.cpp [ 11%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Association.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Association.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Association.cpp [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp [ 11%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp: In member function 'FbcAnd* FbcAnd::createAnd()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:296:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp: In member function 'FbcOr* FbcAnd::createOr()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:333:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp: In member function 'GeneProductRef* FbcAnd::createGeneProductRef()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:370:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 11%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp [ 11%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.h:101, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'FbcAnd* ListOfFbcAssociations::createAnd()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:939:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'FbcOr* ListOfFbcAssociations::createOr()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:976:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'GeneProductRef* ListOfFbcAssociations::createGeneProductRef()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1013:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'virtual SBase* ListOfFbcAssociations::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1109:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1117:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1125:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1133:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp: In member function 'FbcAnd* FbcOr::createAnd()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:308:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp: In member function 'FbcOr* FbcOr::createOr()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:345:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp: In member function 'GeneProductRef* FbcOr::createGeneProductRef()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:382:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.cpp [ 11%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp [ 12%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxBound.h:122, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp: In member function 'virtual SBase* ListOfFluxBounds::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp:1174:7: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.h:89, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp:37: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp: In member function 'FluxObjective* ListOfFluxObjectives::createFluxObjective()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp:1096:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp: In member function 'virtual SBase* ListOfFluxObjectives::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp:1192:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.h:53, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp: In member function 'Layout* LayoutModelPlugin::createLayout()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp:476:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp [ 12%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp:37: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp: In member function 'Association* GeneAssociation::createAssociation()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp:346:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp: In member function 'virtual SBase* ListOfGeneAssociations::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp:695:7: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 12%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/BoundingBox.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/BoundingBox.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/BoundingBox.cpp [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/CompartmentGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/CompartmentGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/CompartmentGlyph.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.h:85, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp: In member function 'GeneProduct* ListOfGeneProducts::createGeneProduct()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp:1094:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp: In member function 'virtual SBase* ListOfGeneProducts::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp:1190:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 12%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp [ 12%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductRef.cpp [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/CubicBezier.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/CubicBezier.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/CubicBezier.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:92, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual FbcAnd* GeneProductAssociation::createAnd()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:208:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual FbcOr* GeneProductAssociation::createOr()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:223:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual GeneProductRef* GeneProductAssociation::createGeneProductRef()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:238:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual SBase* GeneProductAssociation::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:923:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Curve.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Curve.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Dimensions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Dimensions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Dimensions.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Point.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/LineSegment.h:54, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp: In member function 'LineSegment* Curve::createLineSegment()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:357:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp: In member function 'CubicBezier* Curve::createCubicBezier()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:372:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp: In member function 'virtual SBase* ListOfLineSegments::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:640:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp [ 13%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Objective.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Objective.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.h:130, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:37: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp: In member function 'FluxObjective* Objective::createFluxObjective()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:468:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp: In member function 'Objective* ListOfObjectives::createObjective()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:1370:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp: In member function 'virtual SBase* ListOfObjectives::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:1489:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' BUILDSTDERR: FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Point.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/LineSegment.h:54, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.h:55, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:32: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp: In member function 'ReferenceGlyph* GeneralGlyph::createReferenceGlyph()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:647:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp: In member function 'virtual SBase* ListOfReferenceGlyphs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:1174:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Point.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/BoundingBox.h:48, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/util/LayoutUtilities.h:36, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp: In member function 'virtual SBase* ListOfGraphicalObjects::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp:1198:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns, this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 13%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/CobraToFbcConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/CobraToFbcConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util/CobraToFbcConverter.cpp [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Layout.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Layout.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/LineSegment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/LineSegment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/LineSegment.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Dimensions.h:56, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.h:58, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'CompartmentGlyph* Layout::createCompartmentGlyph()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1378:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'SpeciesGlyph* Layout::createSpeciesGlyph()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1394:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'ReactionGlyph* Layout::createReactionGlyph()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1410:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'GeneralGlyph* Layout::createGeneralGlyph()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1425:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'TextGlyph* Layout::createTextGlyph()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1441:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'GraphicalObject* Layout::createAdditionalGraphicalObject()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1458:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfLayouts::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2039:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfCompartmentGlyphs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2211:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfSpeciesGlyphs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2363:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfReactionGlyphs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2512:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfTextGlyphs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2661:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Point.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Point.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Point.cpp [ 13%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcToCobraConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcToCobraConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util/FbcToCobraConverter.cpp [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReferenceGlyph.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Point.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/LineSegment.h:54, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:32: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp: In member function 'SpeciesReferenceGlyph* ReactionGlyph::createSpeciesReferenceGlyph()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:494:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp: In member function 'virtual SBase* ListOfSpeciesReferenceGlyphs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:966:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 13%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcV1ToV2Converter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcV1ToV2Converter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util/FbcV1ToV2Converter.cpp [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/SpeciesGlyph.cpp [ 13%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp [ 13%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python && /usr/bin/cmake -E rename pydoc.i pydoc-normal.i cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python && /usr/bin/cmake -DCUR_BIN_DIRECTORY="/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python" -DVERSION="5.17.0" -P /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/add_version.cmake BUILDSTDERR: Python: Add Version to generated file cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python && /usr/bin/cmake -DBIN_DIRECTORY="/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python" -DSRC_DIRECTORY="/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python" -P /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/patch-python.cmake -- Patching Python wrapper make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 13%] Built target binding_python_swig [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/TextGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/TextGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/TextGlyph.cpp [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/util/LayoutAnnotation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/util/LayoutAnnotation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/util/LayoutAnnotation.cpp [ 13%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp [ 14%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/FbcValidator.cpp [ 14%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/util/LayoutUtilities.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/util/LayoutUtilities.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/util/LayoutUtilities.cpp [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp [ 15%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp [ 15%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp [ 15%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.cpp [ 15%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp [ 15%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/LayoutValidator.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.h:48, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp: In member function 'Group* GroupsModelPlugin::createGroup()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp:229:5: note: in expansion of macro 'GROUPS_CREATE_NS' BUILDSTDERR: GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiASTPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiASTPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiASTPlugin.cpp [ 15%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o [ 15%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Group.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Group.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Group.cpp [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.h:68, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp: In member function 'Group* ListOfGroups::createGroup()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp:243:5: note: in expansion of macro 'GROUPS_CREATE_NS' BUILDSTDERR: GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp: In member function 'virtual SBase* ListOfGroups::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp:303:3: note: in expansion of macro 'GROUPS_CREATE_NS' BUILDSTDERR: GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Group.h:160, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Group.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Group.cpp: In member function 'Member* Group::createMember()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Group.cpp:461:5: note: in expansion of macro 'GROUPS_CREATE_NS' BUILDSTDERR: GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.h:63, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp: In member function 'virtual SBase* MultiCompartmentPlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp:135:7: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp: In member function 'CompartmentReference* MultiCompartmentPlugin::createCompartmentReference()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp:580:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 15%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp [ 15%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Member.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Member.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/Member.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.h:46, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp: In member function 'virtual SBase* MultiListOfReactionsPlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp:131:8: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 15%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.h:96, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp: In member function 'Member* ListOfMembers::createMember()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp:343:5: note: in expansion of macro 'GROUPS_CREATE_NS' BUILDSTDERR: GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp: In member function 'virtual SBase* ListOfMembers::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:66:1: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp:454:3: note: in expansion of macro 'GROUPS_CREATE_NS' BUILDSTDERR: GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.h:49, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'virtual SBase* MultiModelPlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:127:7: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'MultiSpeciesType* MultiModelPlugin::createMultiSpeciesType()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:320:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'BindingSiteSpeciesType* MultiModelPlugin::createBindingSiteSpeciesType()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:347:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'IntraSpeciesReaction* MultiModelPlugin::createIntraSpeciesReaction()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:403:4: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 16%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp [ 16%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/GroupsValidator.cpp [ 16%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp [ 16%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp [ 16%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp [ 16%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.cpp [ 16%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.h:50, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp: In member function 'virtual SBase* MultiSimpleSpeciesReferencePlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp:124:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.h:53, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp: In member function 'Layout* LayoutModelPlugin::createLayout()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp:476:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 16%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp [ 16%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.h:53, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'virtual SBase* MultiSpeciesPlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:132:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'OutwardBindingSite* MultiSpeciesPlugin::createOutwardBindingSite()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:479:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'SpeciesFeature* MultiSpeciesPlugin::createSpeciesFeature()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:632:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'SubListOfSpeciesFeatures* MultiSpeciesPlugin::createSubListOfSpeciesFeatures()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:734:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.h:50, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp: In member function 'virtual SBase* MultiSpeciesReferencePlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp:123:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp: In member function 'SpeciesTypeComponentMapInProduct* MultiSpeciesReferencePlugin::createSpeciesTypeComponentMapInProduct()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp:294:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/CompartmentReference.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/CompartmentReference.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp [ 17%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/BoundingBox.cpp.o [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/IntraSpeciesReaction.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/IntraSpeciesReaction.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/IntraSpeciesReaction.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp: In member function 'virtual SBase* ListOfCompartmentReferences::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp:738:7: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.h:71, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp: In member function 'virtual SBase* ListOfInSpeciesTypeBonds::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp:841:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/MultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/MultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/BoundingBox.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/BoundingBox.cpp [ 17%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/CompartmentGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/CompartmentGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/CompartmentGlyph.cpp [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/OutwardBindingSite.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/OutwardBindingSite.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.h:77, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'SpeciesFeatureType* MultiSpeciesType::createSpeciesFeatureType()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:449:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'SpeciesTypeInstance* MultiSpeciesType::createSpeciesTypeInstance()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:606:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'SpeciesTypeComponentIndex* MultiSpeciesType::createSpeciesTypeComponentIndex()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:763:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'InSpeciesTypeBond* MultiSpeciesType::createInSpeciesTypeBond()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:920:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'virtual SBase* MultiSpeciesType::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:1177:7: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'virtual SBase* ListOfMultiSpeciesTypes::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:1623:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:1630:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.h:138, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp: In member function 'virtual SBase* ListOfOutwardBindingSites::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp:841:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp [ 17%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/CubicBezier.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/CubicBezier.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/CubicBezier.cpp [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeature.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeature.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeatureType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeatureType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp: In member function 'virtual SBase* ListOfPossibleSpeciesFeatureValues::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp:738:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.h:79, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp: In member function 'SpeciesFeatureValue* SpeciesFeature::createSpeciesFeatureValue()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:544:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp: In member function 'virtual SBase* SpeciesFeature::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:757:3: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp: In member function 'virtual SBase* ListOfSpeciesFeatures::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:1377:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:1384:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 17%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Curve.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Curve.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.h:72, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp: In member function 'PossibleSpeciesFeatureValue* SpeciesFeatureType::createPossibleSpeciesFeatureValue()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:427:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp: In member function 'virtual SBase* SpeciesFeatureType::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:618:3: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp: In member function 'virtual SBase* ListOfSpeciesFeatureTypes::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:999:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp [ 18%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Dimensions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Dimensions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Dimensions.cpp [ 18%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Point.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/LineSegment.h:54, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp: In member function 'LineSegment* Curve::createLineSegment()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:357:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp: In member function 'CubicBezier* Curve::createCubicBezier()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:372:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp: In member function 'virtual SBase* ListOfLineSegments::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:640:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp: In member function 'virtual SBase* ListOfSpeciesFeatureValues::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp:586:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 18%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp [ 18%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Point.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/LineSegment.h:54, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.h:55, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:32: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp: In member function 'ReferenceGlyph* GeneralGlyph::createReferenceGlyph()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:647:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp: In member function 'virtual SBase* ListOfReferenceGlyphs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:1174:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 18%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Point.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/BoundingBox.h:48, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.h:60, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/util/LayoutUtilities.h:36, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp: In member function 'virtual SBase* ListOfGraphicalObjects::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp:1198:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns, this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.h:70, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp: In member function 'virtual SBase* ListOfSpeciesTypeComponentIndexes::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp:860:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.h:70, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp: In member function 'virtual SBase* ListOfSpeciesTypeComponentMapInProducts::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp:929:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 18%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Layout.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Layout.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/LineSegment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/LineSegment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/LineSegment.cpp [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Point.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Point.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Point.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.h:74, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp: In member function 'virtual SBase* ListOfSpeciesTypeInstances::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp:854:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Dimensions.h:56, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.h:58, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:36: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'CompartmentGlyph* Layout::createCompartmentGlyph()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1378:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'SpeciesGlyph* Layout::createSpeciesGlyph()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1394:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'ReactionGlyph* Layout::createReactionGlyph()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1410:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'GeneralGlyph* Layout::createGeneralGlyph()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1425:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'TextGlyph* Layout::createTextGlyph()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1441:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'GraphicalObject* Layout::createAdditionalGraphicalObject()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1458:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfLayouts::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2039:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfCompartmentGlyphs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2211:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfSpeciesGlyphs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2363:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfReactionGlyphs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2512:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfTextGlyphs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2661:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/MultiConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/MultiConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/MultiConsistencyValidator.cpp [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/MultiIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/MultiIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/MultiIdentifierConsistencyValidator.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.h:113, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp: In member function 'SpeciesFeature* SubListOfSpeciesFeatures::createSpeciesFeature()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp:270:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp: In member function 'virtual SBase* SubListOfSpeciesFeatures::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp:482:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Point.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/LineSegment.h:54, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Curve.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:32: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp: In member function 'SpeciesReferenceGlyph* ReactionGlyph::createSpeciesReferenceGlyph()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:494:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp: In member function 'virtual SBase* ListOfSpeciesReferenceGlyphs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:966:5: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/ReferenceGlyph.cpp [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/MultiMathMLConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/MultiMathMLConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/MultiMathMLConsistencyValidator.cpp [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/MultiValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/MultiValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/MultiValidator.cpp [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiConsistencyConstraints.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiConsistencyConstraints.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/MultiConsistencyConstraints.cpp [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/SpeciesGlyph.cpp [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/TextGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/TextGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/TextGlyph.cpp [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiIdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiIdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/MultiIdBase.cpp [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/util/LayoutAnnotation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/util/LayoutAnnotation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/util/LayoutAnnotation.cpp [ 20%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/util/LayoutUtilities.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/util/LayoutUtilities.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/util/LayoutUtilities.cpp [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiIdentifierConsistencyConstraints.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiIdentifierConsistencyConstraints.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/MultiIdentifierConsistencyConstraints.cpp [ 20%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp [ 20%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckRepresentationType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckRepresentationType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/MultiMathCiCheckRepresentationType.cpp [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckSpeciesReference.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckSpeciesReference.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/MultiMathCiCheckSpeciesReference.cpp [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiMathMLConsistencyConstraints.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiMathMLConsistencyConstraints.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/MultiMathMLConsistencyConstraints.cpp [ 20%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/LayoutValidator.cpp [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueCRefIdsWithinCompartment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueCRefIdsWithinCompartment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueCRefIdsWithinCompartment.cpp [ 21%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueISTBIdsWithinMultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueISTBIdsWithinMultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueISTBIdsWithinMultiSpeciesType.cpp [ 21%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp [ 21%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiASTPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiASTPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiASTPlugin.cpp [ 21%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueMultiComponentIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueMultiComponentIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueMultiComponentIds.cpp [ 21%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueMultiIdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueMultiIdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueMultiIdBase.cpp [ 21%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp [ 21%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSFTIdsWithinMultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSFTIdsWithinMultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSFTIdsWithinMultiSpeciesType.cpp [ 21%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.cpp [ 21%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.h:63, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp: In member function 'virtual SBase* MultiCompartmentPlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp:135:7: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp: In member function 'CompartmentReference* MultiCompartmentPlugin::createCompartmentReference()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp:580:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.h:46, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp: In member function 'virtual SBase* MultiListOfReactionsPlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp:131:8: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 21%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSLOSFIdsWithinSpecies.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSLOSFIdsWithinSpecies.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSLOSFIdsWithinSpecies.cpp [ 21%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSTCIdsWithinMultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSTCIdsWithinMultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSTCIdsWithinMultiSpeciesType.cpp [ 21%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSTIIdsWithinMultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSTIIdsWithinMultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSTIIdsWithinMultiSpeciesType.cpp [ 21%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp [ 21%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSpeciesFeatureIdsWithinSpecies.cpp.o [ 21%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSpeciesFeatureIdsWithinSpecies.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSpeciesFeatureIdsWithinSpecies.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp [ 21%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.h:49, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'virtual SBase* MultiModelPlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:127:7: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'MultiSpeciesType* MultiModelPlugin::createMultiSpeciesType()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:320:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'BindingSiteSpeciesType* MultiModelPlugin::createBindingSiteSpeciesType()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:347:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'IntraSpeciesReaction* MultiModelPlugin::createIntraSpeciesReaction()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:403:4: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 21%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.cpp [ 21%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp [ 22%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.h:50, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp: In member function 'virtual SBase* MultiSimpleSpeciesReferencePlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp:124:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.h:53, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'virtual SBase* MultiSpeciesPlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:132:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'OutwardBindingSite* MultiSpeciesPlugin::createOutwardBindingSite()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:479:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'SpeciesFeature* MultiSpeciesPlugin::createSpeciesFeature()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:632:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'SubListOfSpeciesFeatures* MultiSpeciesPlugin::createSubListOfSpeciesFeatures()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:734:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.h:50, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp: In member function 'virtual SBase* MultiSpeciesReferencePlugin::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp:123:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp: In member function 'SpeciesTypeComponentMapInProduct* MultiSpeciesReferencePlugin::createSpeciesTypeComponentMapInProduct()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp:294:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/DefaultTerm.cpp [ 22%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.h:54, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp: In member function 'QualitativeSpecies* QualModelPlugin::createQualitativeSpecies()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp:830:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp: In member function 'Transition* QualModelPlugin::createTransition()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp:1012:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Input.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Input.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Input.cpp [ 23%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/CompartmentReference.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/CompartmentReference.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Output.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Output.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Output.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:58, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.h:68, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp: In member function 'DefaultTerm* ListOfFunctionTerms::createDefaultTerm()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp:1063:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp: In member function 'virtual SBase* ListOfFunctionTerms::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp:1120:3: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:58, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Input.h:98, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Input.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Input.cpp: In member function 'virtual SBase* ListOfInputs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Input.cpp:1333:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp: In member function 'virtual SBase* ListOfCompartmentReferences::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp:738:7: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:58, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Output.h:89, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Output.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Output.cpp: In member function 'virtual SBase* ListOfOutputs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Output.cpp:1236:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 23%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Transition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Transition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/QualConsistencyValidator.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.h:71, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp: In member function 'virtual SBase* ListOfInSpeciesTypeBonds::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp:841:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:58, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.h:80, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp: In member function 'virtual SBase* ListOfQualitativeSpecies::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp:1329:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:58, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.h:82, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'Input* Transition::createInput()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:451:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'Output* Transition::createOutput()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:635:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'FunctionTerm* Transition::createFunctionTerm()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:793:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'virtual SBase* ListOfTransitions::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:1762:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 23%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/IntraSpeciesReaction.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/IntraSpeciesReaction.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/IntraSpeciesReaction.cpp [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/QualIdentifierConsistencyValidator.cpp [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/QualValidator.cpp [ 23%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/MultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/MultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp [ 23%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/OutwardBindingSite.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/OutwardBindingSite.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp [ 23%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QSAssignedOnce.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QSAssignedOnce.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints/QSAssignedOnce.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.h:77, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'SpeciesFeatureType* MultiSpeciesType::createSpeciesFeatureType()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:449:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'SpeciesTypeInstance* MultiSpeciesType::createSpeciesTypeInstance()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:606:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.h:138, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp: In member function 'virtual SBase* ListOfOutwardBindingSites::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp:841:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'SpeciesTypeComponentIndex* MultiSpeciesType::createSpeciesTypeComponentIndex()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:763:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'InSpeciesTypeBond* MultiSpeciesType::createInSpeciesTypeBond()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:920:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'virtual SBase* MultiSpeciesType::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:1177:7: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'virtual SBase* ListOfMultiSpeciesTypes::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:1623:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:1630:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp: In member function 'virtual SBase* ListOfPossibleSpeciesFeatureValues::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp:738:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QualCSymbolMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QualCSymbolMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints/QualCSymbolMathCheck.cpp [ 23%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeature.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeature.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp [ 23%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeatureType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeatureType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp [ 23%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.h:79, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp: In member function 'SpeciesFeatureValue* SpeciesFeature::createSpeciesFeatureValue()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:544:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp: In member function 'virtual SBase* SpeciesFeature::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:757:3: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp: In member function 'virtual SBase* ListOfSpeciesFeatures::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:1377:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:1384:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.h:72, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp: In member function 'PossibleSpeciesFeatureValue* SpeciesFeatureType::createPossibleSpeciesFeatureValue()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:427:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp: In member function 'virtual SBase* SpeciesFeatureType::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:618:3: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp: In member function 'virtual SBase* ListOfSpeciesFeatureTypes::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:999:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp: In member function 'virtual SBase* ListOfSpeciesFeatureValues::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp:586:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 25%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp.o [ 24%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.cpp [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.h:70, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp: In member function 'virtual SBase* ListOfSpeciesTypeComponentMapInProducts::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp:929:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.h:70, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp: In member function 'virtual SBase* ListOfSpeciesTypeComponentIndexes::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp:860:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp [ 25%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp [ 25%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp [ 25%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/MultiConsistencyValidator.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.h:74, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp: In member function 'virtual SBase* ListOfSpeciesTypeInstances::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp:854:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp:28: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp: In member function 'LocalRenderInformation* RenderLayoutPlugin::createLocalRenderInformation()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp:441:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:65, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.h:113, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp:30: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp: In member function 'SpeciesFeature* SubListOfSpeciesFeatures::createSpeciesFeature()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp:270:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp: In member function 'virtual SBase* SubListOfSpeciesFeatures::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:72:5: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp:482:5: note: in expansion of macro 'MULTI_CREATE_NS' BUILDSTDERR: MULTI_CREATE_NS(multins, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp [ 25%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/MultiIdentifierConsistencyValidator.cpp [ 25%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiMathMLConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiMathMLConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/MultiMathMLConsistencyValidator.cpp [ 25%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/MultiValidator.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp:28: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp: In member function 'GlobalRenderInformation* RenderListOfLayoutsPlugin::createGlobalRenderInformation()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp:704:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ColorDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ColorDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.cpp [ 25%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiConsistencyConstraints.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiConsistencyConstraints.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/MultiConsistencyConstraints.cpp [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/DefaultValues.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/DefaultValues.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/DefaultValues.cpp [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Ellipse.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Ellipse.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Ellipse.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.cpp:50: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.h: In copy constructor 'ColorDefinition::ColorDefinition(const ColorDefinition&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.h:95:15: warning: 'ColorDefinition::mValue' will be initialized after [-Wreorder] BUILDSTDERR: std::string mValue; BUILDSTDERR: ^~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.h:90:17: warning: 'unsigned char ColorDefinition::mRed' [-Wreorder] BUILDSTDERR: unsigned char mRed; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.cpp:272:1: warning: when initialized here [-Wreorder] BUILDSTDERR: ColorDefinition::ColorDefinition(const ColorDefinition& orig) BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 25%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiIdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiIdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/MultiIdBase.cpp [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp [ 25%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiIdentifierConsistencyConstraints.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiIdentifierConsistencyConstraints.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/MultiIdentifierConsistencyConstraints.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.h:63, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp: In member function 'GlobalStyle* GlobalRenderInformation::createGlobalStyle()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp:360:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp: In member function 'virtual void GlobalRenderInformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp:837:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ [ 25%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckRepresentationType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckRepresentationType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/MultiMathCiCheckRepresentationType.cpp [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalStyle.cpp [ 25%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckSpeciesReference.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckSpeciesReference.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/MultiMathCiCheckSpeciesReference.cpp [ 25%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiMathMLConsistencyConstraints.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiMathMLConsistencyConstraints.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/MultiMathMLConsistencyConstraints.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalStyle.cpp: In member function 'virtual void GlobalStyle::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalStyle.cpp:218:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GradientBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GradientBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp [ 26%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GradientStop.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GradientStop.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientStop.cpp [ 26%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp [ 27%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueCRefIdsWithinCompartment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueCRefIdsWithinCompartment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueCRefIdsWithinCompartment.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.h:93, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp: In member function 'GradientStop* GradientBase::createGradientStop()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp:561:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp: In member function 'virtual SBase* GradientBase::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp:1251:22: warning: unused variable 'name' [-Wunused-variable] BUILDSTDERR: const std::string& name = stream.peek().getName(); BUILDSTDERR: ^~~~ [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Image.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Image.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Image.cpp [ 27%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueISTBIdsWithinMultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueISTBIdsWithinMultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueISTBIdsWithinMultiSpeciesType.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp: In member function 'virtual void GraphicalPrimitive1D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp:1158:47: warning: 'numErrs' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: if (log && log->getNumErrors() == numErrs + 1 && BUILDSTDERR: ~~~~~~~~^~~ [ 27%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueMultiComponentIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueMultiComponentIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueMultiComponentIds.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h: In constructor 'GraphicalPrimitive2D::GraphicalPrimitive2D(RenderPkgNamespaces*, const string&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:92:7: warning: 'GraphicalPrimitive2D::mFillRule' will be initialized after [-Wreorder] BUILDSTDERR: int mFillRule; BUILDSTDERR: ^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:91:15: warning: 'std::__cxx11::string GraphicalPrimitive2D::mFill' [-Wreorder] BUILDSTDERR: std::string mFill; BUILDSTDERR: ^~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp:135:1: warning: when initialized here [-Wreorder] BUILDSTDERR: GraphicalPrimitive2D::GraphicalPrimitive2D(RenderPkgNamespaces* renderns, const std::string& id) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~ [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/LineEnding.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/LineEnding.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/LinearGradient.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/LinearGradient.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LinearGradient.cpp [ 27%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueMultiIdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueMultiIdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueMultiIdBase.cpp [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.h: In constructor 'LineEnding::LineEnding(const XMLNode&, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.h:88:16: warning: 'LineEnding::mBoundingBox' will be initialized after [-Wreorder] BUILDSTDERR: BoundingBox* mBoundingBox; BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.h:87:16: warning: 'RenderGroup* LineEnding::mGroup' [-Wreorder] BUILDSTDERR: RenderGroup* mGroup; BUILDSTDERR: ^~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:107:1: warning: when initialized here [-Wreorder] BUILDSTDERR: LineEnding::LineEnding(const XMLNode& node, unsigned int l2version) BUILDSTDERR: ^~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:55, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:62, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.h:68, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp: In member function 'RenderGroup* LineEnding::createGroup()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:524:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp: In member function 'BoundingBox* LineEnding::createBoundingBox()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:550:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp: In member function 'virtual SBase* LineEnding::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:1304:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:1306:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp: In member function 'virtual void LineEnding::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:1478:47: warning: 'numErrs' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: if (log && log->getNumErrors() == numErrs + 1 && BUILDSTDERR: ~~~~~~~~^~~ [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp: In member function 'ColorDefinition* ListOfColorDefinitions::createColorDefinition()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp:294:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp: In member function 'virtual SBase* ListOfColorDefinitions::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp:366:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 27%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSFTIdsWithinMultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSFTIdsWithinMultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSFTIdsWithinMultiSpeciesType.cpp [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp [ 27%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSLOSFIdsWithinSpecies.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSLOSFIdsWithinSpecies.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSLOSFIdsWithinSpecies.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.h:63, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp: In member function 'RenderCubicBezier* ListOfCurveElements::createCubicBezier()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:319:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp: In member function 'virtual SBase* ListOfCurveElements::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:406:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 27%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSTCIdsWithinMultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSTCIdsWithinMultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSTCIdsWithinMultiSpeciesType.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.h:66, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Image* ListOfDrawables::createImage()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:256:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Ellipse* ListOfDrawables::createEllipse()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:284:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Rectangle* ListOfDrawables::createRectangle()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:312:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Polygon* ListOfDrawables::createPolygon()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:340:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'RenderGroup* ListOfDrawables::createGroup()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:368:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'LineEnding* ListOfDrawables::createLineEnding()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:396:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Text* ListOfDrawables::createText()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:424:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'RenderCurve* ListOfDrawables::createCurve()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:452:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'virtual SBase* ListOfDrawables::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:512:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp [ 27%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSTIIdsWithinMultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSTIIdsWithinMultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSTIIdsWithinMultiSpeciesType.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'DefaultValues* ListOfGlobalRenderInformation::createDefaultValues()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:420:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp: In member function 'GlobalStyle* ListOfGlobalStyles::createGlobalStyle()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp:278:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'GlobalRenderInformation* ListOfGlobalRenderInformation::createGlobalRenderInformation()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:600:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp: In member function 'virtual SBase* ListOfGlobalStyles::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp:343:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'virtual SBase* ListOfGlobalRenderInformation::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:835:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'virtual void ListOfGlobalRenderInformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:892:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp: In member function 'LinearGradient* ListOfGradientDefinitions::createLinearGradient()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:305:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp: In member function 'RadialGradient* ListOfGradientDefinitions::createRadialGradient()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:334:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp: In member function 'virtual SBase* ListOfGradientDefinitions::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:394:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 27%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSpeciesFeatureIdsWithinSpecies.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSpeciesFeatureIdsWithinSpecies.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSpeciesFeatureIdsWithinSpecies.cpp [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp [ 28%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.cpp [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.h:75, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp: In member function 'GradientStop* ListOfGradientStops::createGradientStop()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:299:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp: In member function 'virtual SBase* ListOfGradientStops::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:359:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.h:63, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp: In member function 'LineEnding* ListOfLineEndings::createLineEnding()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp:294:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp: In member function 'virtual SBase* ListOfLineEndings::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp:368:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 28%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp [ 28%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.h:63, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'DefaultValues* ListOfLocalRenderInformation::createDefaultValues()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:417:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'LocalRenderInformation* ListOfLocalRenderInformation::createLocalRenderInformation()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:581:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'virtual SBase* ListOfLocalRenderInformation::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:785:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'virtual void ListOfLocalRenderInformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:842:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.h:54, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp: In member function 'QualitativeSpecies* QualModelPlugin::createQualitativeSpecies()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp:830:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp: In member function 'Transition* QualModelPlugin::createTransition()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp:1012:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.h:62, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp: In member function 'LocalStyle* ListOfLocalStyles::createLocalStyle()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp:294:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp: In member function 'virtual SBase* ListOfLocalStyles::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp:359:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp [ 29%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/DefaultTerm.cpp [ 29%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp [ 29%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Input.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Input.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Input.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp: In member function 'LocalStyle* LocalRenderInformation::createLocalStyle()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:334:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp: In member function 'LocalStyle* LocalRenderInformation::createStyle(const string&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:358:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp: In member function 'virtual void LocalRenderInformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:830:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:58, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.h:68, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp: In member function 'DefaultTerm* ListOfFunctionTerms::createDefaultTerm()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp:1063:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp: In member function 'virtual SBase* ListOfFunctionTerms::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp:1120:3: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:58, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Input.h:98, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Input.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Input.cpp: In member function 'virtual SBase* ListOfInputs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Input.cpp:1333:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalStyle.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalStyle.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalStyle.cpp [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Polygon.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Polygon.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RadialGradient.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RadialGradient.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RadialGradient.cpp [ 29%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Output.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Output.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Output.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalStyle.cpp: In member function 'virtual void LocalStyle::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalStyle.cpp:321:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:55, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:62, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp: In constructor 'Polygon::Polygon(const XMLNode&, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:115:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp: In member function 'RenderPoint* Polygon::createPoint()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:416:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp: In member function 'RenderCubicBezier* Polygon::createCubicBezier()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:444:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp: In member function 'virtual void Polygon::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:829:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ [ 29%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp [ 29%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Transition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Transition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:58, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Output.h:89, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Output.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Output.cpp: In member function 'virtual SBase* ListOfOutputs::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Output.cpp:1236:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Rectangle.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Rectangle.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Rectangle.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:58, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.h:80, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp: In member function 'virtual SBase* ListOfQualitativeSpecies::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp:1329:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 29%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/QualConsistencyValidator.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:58, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.h:82, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'Input* Transition::createInput()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:451:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'Output* Transition::createOutput()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:635:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'FunctionTerm* Transition::createFunctionTerm()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:793:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'virtual SBase* ListOfTransitions::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/QualExtension.h:65:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:1762:5: note: in expansion of macro 'QUAL_CREATE_NS' BUILDSTDERR: QUAL_CREATE_NS(qualns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RelAbsVector.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RelAbsVector.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RelAbsVector.cpp [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCubicBezier.cpp [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCurve.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCurve.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Dimensions.h:56, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.h:58, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/util/LayoutAnnotation.h:40, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp: In member function 'RenderPoint* RenderCurve::createPoint()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp:468:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp: In member function 'RenderCubicBezier* RenderCurve::createCubicBezier()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp:496:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 29%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualIdentifierConsistencyValidator.cpp.o [ 29%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/QualIdentifierConsistencyValidator.cpp [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderGroup.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderGroup.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp [ 30%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h: In constructor 'RenderGroup::RenderGroup(unsigned int, unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:88:15: warning: 'RenderGroup::mEndHead' will be initialized after [-Wreorder] BUILDSTDERR: std::string mEndHead; BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:81:15: warning: 'std::__cxx11::string RenderGroup::mFontFamily' [-Wreorder] BUILDSTDERR: std::string mFontFamily; BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:76:1: warning: when initialized here [-Wreorder] BUILDSTDERR: RenderGroup::RenderGroup(unsigned int level, BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:86:7: warning: 'RenderGroup::mVTextAnchor' will be initialized after [-Wreorder] BUILDSTDERR: int mVTextAnchor; BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:82:16: warning: 'RelAbsVector RenderGroup::mFontSize' [-Wreorder] BUILDSTDERR: RelAbsVector mFontSize; BUILDSTDERR: ^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:76:1: warning: when initialized here [-Wreorder] BUILDSTDERR: RenderGroup::RenderGroup(unsigned int level, BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h: In constructor 'RenderGroup::RenderGroup(RenderPkgNamespaces*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:88:15: warning: 'RenderGroup::mEndHead' will be initialized after [-Wreorder] BUILDSTDERR: std::string mEndHead; BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:81:15: warning: 'std::__cxx11::string RenderGroup::mFontFamily' [-Wreorder] BUILDSTDERR: std::string mFontFamily; BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:99:1: warning: when initialized here [-Wreorder] BUILDSTDERR: RenderGroup::RenderGroup(RenderPkgNamespaces *renderns) BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:86:7: warning: 'RenderGroup::mVTextAnchor' will be initialized after [-Wreorder] BUILDSTDERR: int mVTextAnchor; BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:82:16: warning: 'RelAbsVector RenderGroup::mFontSize' [-Wreorder] BUILDSTDERR: RelAbsVector mFontSize; BUILDSTDERR: ^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:99:1: warning: when initialized here [-Wreorder] BUILDSTDERR: RenderGroup::RenderGroup(RenderPkgNamespaces *renderns) BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h: In copy constructor 'RenderGroup::RenderGroup(const RenderGroup&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:88:15: warning: 'RenderGroup::mEndHead' will be initialized after [-Wreorder] BUILDSTDERR: std::string mEndHead; BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:81:15: warning: 'std::__cxx11::string RenderGroup::mFontFamily' [-Wreorder] BUILDSTDERR: std::string mFontFamily; BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:260:1: warning: when initialized here [-Wreorder] BUILDSTDERR: RenderGroup::RenderGroup(const RenderGroup& orig) BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:86:7: warning: 'RenderGroup::mVTextAnchor' will be initialized after [-Wreorder] BUILDSTDERR: int mVTextAnchor; BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:82:16: warning: 'RelAbsVector RenderGroup::mFontSize' [-Wreorder] BUILDSTDERR: RelAbsVector mFontSize; BUILDSTDERR: ^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:260:1: warning: when initialized here [-Wreorder] BUILDSTDERR: RenderGroup::RenderGroup(const RenderGroup& orig) BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:55, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:62, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:67, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Image* RenderGroup::createImage()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1109:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Ellipse* RenderGroup::createEllipse()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1137:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Rectangle* RenderGroup::createRectangle()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1165:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Polygon* RenderGroup::createPolygon()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1193:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'RenderGroup* RenderGroup::createGroup()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1221:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'LineEnding* RenderGroup::createLineEnding()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1249:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Text* RenderGroup::createText()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1277:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'RenderCurve* RenderGroup::createCurve()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1305:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'void RenderGroup::importOldCurve(const XMLNode&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:2622:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'ColorDefinition* RenderInformationBase::createColorDefinition()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:729:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'LinearGradient* RenderInformationBase::createLinearGradientDefinition()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:891:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'RadialGradient* RenderInformationBase::createRadialGradientDefinition()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:919:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'LineEnding* RenderInformationBase::createLineEnding()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:1081:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 30%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualValidator.cpp.o [ 30%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QSAssignedOnce.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QSAssignedOnce.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints/QSAssignedOnce.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/QualValidator.cpp [ 30%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderPoint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderPoint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderPoint.cpp [ 30%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QualCSymbolMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QualCSymbolMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints/QualCSymbolMathCheck.cpp [ 30%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Style.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Style.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp [ 30%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp [ 30%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Text.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Text.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.cpp [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp: In member function 'RenderGroup* Style::createGroup()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp:588:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp: In member function 'virtual SBase* Style::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp:1260:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h: In copy constructor 'Text::Text(const Text&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h:116:7: warning: 'Text::mVTextAnchor' will be initialized after [-Wreorder] BUILDSTDERR: int mVTextAnchor; BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h:112:16: warning: 'RelAbsVector Text::mFontSize' [-Wreorder] BUILDSTDERR: RelAbsVector mFontSize; BUILDSTDERR: ^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.cpp:198:1: warning: when initialized here [-Wreorder] BUILDSTDERR: Text::Text(const Text& orig) BUILDSTDERR: ^~~~ [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation.cpp:500:1: warning: "/*" within comment [-Wcomment] BUILDSTDERR: /* BUILDSTDERR: [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation2D.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation2D.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation2D.cpp [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/util/RenderLayoutConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/util/RenderLayoutConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util/RenderLayoutConverter.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation.cpp: In member function 'virtual void Transformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation.cpp:798:16: warning: unused variable 'pkgVersion' [-Wunused-variable] BUILDSTDERR: unsigned int pkgVersion = getPackageVersion(); BUILDSTDERR: ^~~~~~~~~~ [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/util/RenderUtilities.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/util/RenderUtilities.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util/RenderUtilities.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation2D.cpp: In member function 'virtual void Transformation2D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation2D.cpp:714:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.cpp [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/RenderConsistencyValidator.cpp [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/RenderValidator.cpp [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp:28: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp: In member function 'LocalRenderInformation* RenderLayoutPlugin::createLocalRenderInformation()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp:441:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ColorDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ColorDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp:28: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp: In member function 'GlobalRenderInformation* RenderListOfLayoutsPlugin::createGlobalRenderInformation()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp:704:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/DefaultValues.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/DefaultValues.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/DefaultValues.cpp [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Ellipse.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Ellipse.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Ellipse.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.cpp:50: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.h: In copy constructor 'ColorDefinition::ColorDefinition(const ColorDefinition&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.h:95:15: warning: 'ColorDefinition::mValue' will be initialized after [-Wreorder] BUILDSTDERR: std::string mValue; BUILDSTDERR: ^~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.h:90:17: warning: 'unsigned char ColorDefinition::mRed' [-Wreorder] BUILDSTDERR: unsigned char mRed; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ColorDefinition.cpp:272:1: warning: when initialized here [-Wreorder] BUILDSTDERR: ColorDefinition::ColorDefinition(const ColorDefinition& orig) BUILDSTDERR: ^~~~~~~~~~~~~~~ [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/annotation/CVTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/annotation/CVTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/CVTerm.cpp [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/annotation/Date.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/annotation/Date.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalStyle.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.h:63, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp: In member function 'GlobalStyle* GlobalRenderInformation::createGlobalStyle()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp:360:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp: In member function 'virtual void GlobalRenderInformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp:837:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GradientBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GradientBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp [ 32%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GradientStop.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GradientStop.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientStop.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp: In member function 'void Date::parseDateNumbersToString()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:459:25: warning: '%u' directive output may be truncated writing between 2 and 10 bytes into a region of size between 0 and 8 [-Wformat-truncation=] BUILDSTDERR: snprintf(cdate, 10, "%u-%u-", mYear, mMonth); BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:459:25: note: directive argument in the range [10, 4294967295] BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 6 and 23 bytes into a destination of size 10 BUILDSTDERR: return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:465:25: warning: 'T' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] BUILDSTDERR: snprintf(cdate, 10, "%uT", mDay); BUILDSTDERR: ^~~~~ BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 4 and 12 bytes into a destination of size 10 BUILDSTDERR: return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:471:25: warning: ':' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] BUILDSTDERR: snprintf(cdate, 10, "%u:", mHour); BUILDSTDERR: ^~~~~ BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 4 and 12 bytes into a destination of size 10 BUILDSTDERR: return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:477:25: warning: ':' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] BUILDSTDERR: snprintf(cdate, 10, "%u:", mMinute); BUILDSTDERR: ^~~~~ BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 4 and 12 bytes into a destination of size 10 BUILDSTDERR: return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:483:25: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] BUILDSTDERR: snprintf(cdate, 10, "%u", mSecond); BUILDSTDERR: ^~~~ BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 3 and 11 bytes into a destination of size 10 BUILDSTDERR: return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:502:27: warning: ':' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] BUILDSTDERR: snprintf(cdate, 10, "%u:", mHoursOffset); BUILDSTDERR: ^~~~~ BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 4 and 12 bytes into a destination of size 10 BUILDSTDERR: return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:508:27: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] BUILDSTDERR: snprintf(cdate, 10, "%u", mMinutesOffset); BUILDSTDERR: ^~~~ BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 3 and 11 bytes into a destination of size 10 BUILDSTDERR: return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/annotation/ModelCreator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/annotation/ModelCreator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/ModelCreator.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalStyle.cpp: In member function 'virtual void GlobalStyle::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GlobalStyle.cpp:218:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ [ 33%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.h:93, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp: In member function 'GradientStop* GradientBase::createGradientStop()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp:561:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp: In member function 'virtual SBase* GradientBase::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp:1251:22: warning: unused variable 'name' [-Wunused-variable] BUILDSTDERR: const std::string& name = stream.peek().getName(); BUILDSTDERR: ^~~~ [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/annotation/ModelHistory.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/annotation/ModelHistory.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/ModelHistory.cpp [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/annotation/RDFAnnotationParser.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/annotation/RDFAnnotationParser.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/RDFAnnotationParser.cpp [ 33%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp [ 33%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Image.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Image.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Image.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp: In member function 'virtual void GraphicalPrimitive1D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp:1158:47: warning: 'numErrs' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: if (log && log->getNumErrors() == numErrs + 1 && BUILDSTDERR: ~~~~~~~~^~~ [ 33%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LineEnding.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LineEnding.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h: In constructor 'GraphicalPrimitive2D::GraphicalPrimitive2D(RenderPkgNamespaces*, const string&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:92:7: warning: 'GraphicalPrimitive2D::mFillRule' will be initialized after [-Wreorder] BUILDSTDERR: int mFillRule; BUILDSTDERR: ^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:91:15: warning: 'std::__cxx11::string GraphicalPrimitive2D::mFill' [-Wreorder] BUILDSTDERR: std::string mFill; BUILDSTDERR: ^~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp:135:1: warning: when initialized here [-Wreorder] BUILDSTDERR: GraphicalPrimitive2D::GraphicalPrimitive2D(RenderPkgNamespaces* renderns, const std::string& id) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~ [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/common/libsbml-version.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/common/libsbml-version.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/common/libsbml-version.cpp [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/common/operationReturnValues.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/common/operationReturnValues.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/common/operationReturnValues.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.h: In constructor 'LineEnding::LineEnding(const XMLNode&, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.h:88:16: warning: 'LineEnding::mBoundingBox' will be initialized after [-Wreorder] BUILDSTDERR: BoundingBox* mBoundingBox; BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.h:87:16: warning: 'RenderGroup* LineEnding::mGroup' [-Wreorder] BUILDSTDERR: RenderGroup* mGroup; BUILDSTDERR: ^~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:107:1: warning: when initialized here [-Wreorder] BUILDSTDERR: LineEnding::LineEnding(const XMLNode& node, unsigned int l2version) BUILDSTDERR: ^~~~~~~~~~ [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/ConversionOption.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/ConversionOption.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/ConversionOption.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:55, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:62, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.h:68, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp: In member function 'RenderGroup* LineEnding::createGroup()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:524:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp: In member function 'BoundingBox* LineEnding::createBoundingBox()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:550:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp: In member function 'virtual SBase* LineEnding::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:1304:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:1306:3: note: in expansion of macro 'LAYOUT_CREATE_NS' BUILDSTDERR: LAYOUT_CREATE_NS(layoutns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 33%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LinearGradient.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LinearGradient.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LinearGradient.cpp [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/ConversionProperties.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/ConversionProperties.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/ConversionProperties.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp: In member function 'virtual void LineEnding::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:1478:47: warning: 'numErrs' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: if (log && log->getNumErrors() == numErrs + 1 && BUILDSTDERR: ~~~~~~~~^~~ [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/RegisterConverters.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/RegisterConverters.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/RegisterConverters.cpp [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLConverter.cpp [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLConverterRegistry.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLConverterRegistry.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLConverterRegistry.cpp [ 33%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp [ 33%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp [ 33%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp: In member function 'ColorDefinition* ListOfColorDefinitions::createColorDefinition()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp:294:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp: In member function 'virtual SBase* ListOfColorDefinitions::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp:366:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLFunctionDefinitionConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLFunctionDefinitionConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLFunctionDefinitionConverter.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.h:63, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp: In member function 'RenderCubicBezier* ListOfCurveElements::createCubicBezier()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:319:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp: In member function 'virtual SBase* ListOfCurveElements::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:406:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 33%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLIdConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLIdConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLIdConverter.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.h:66, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Image* ListOfDrawables::createImage()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:256:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Ellipse* ListOfDrawables::createEllipse()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:284:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Rectangle* ListOfDrawables::createRectangle()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:312:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Polygon* ListOfDrawables::createPolygon()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:340:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'RenderGroup* ListOfDrawables::createGroup()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:368:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'LineEnding* ListOfDrawables::createLineEnding()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:396:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Text* ListOfDrawables::createText()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:424:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'RenderCurve* ListOfDrawables::createCurve()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:452:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'virtual SBase* ListOfDrawables::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:512:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 33%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp [ 34%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLInferUnitsConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLInferUnitsConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLInferUnitsConverter.cpp [ 34%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLInitialAssignmentConverter.cpp [ 34%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLLevel1Version1Converter.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'DefaultValues* ListOfGlobalRenderInformation::createDefaultValues()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:420:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'GlobalRenderInformation* ListOfGlobalRenderInformation::createGlobalRenderInformation()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:600:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'virtual SBase* ListOfGlobalRenderInformation::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:835:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'virtual void ListOfGlobalRenderInformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:892:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ [ 34%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp [ 34%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLLevelVersionConverter.cpp [ 34%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLLocalParameterConverter.cpp [ 34%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp: In member function 'GlobalStyle* ListOfGlobalStyles::createGlobalStyle()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp:278:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp: In member function 'virtual SBase* ListOfGlobalStyles::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp:343:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp [ 35%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLRateOfConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLRateOfConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLRateOfConverter.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.h:61, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp: In member function 'LinearGradient* ListOfGradientDefinitions::createLinearGradient()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:305:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp: In member function 'RadialGradient* ListOfGradientDefinitions::createRadialGradient()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:334:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp: In member function 'virtual SBase* ListOfGradientDefinitions::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:394:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.h:75, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp: In member function 'GradientStop* ListOfGradientStops::createGradientStop()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:299:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp: In member function 'virtual SBase* ListOfGradientStops::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:359:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.h:63, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp: In member function 'LineEnding* ListOfLineEndings::createLineEnding()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp:294:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp: In member function 'virtual SBase* ListOfLineEndings::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp:368:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 35%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLReactionConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLReactionConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLReactionConverter.cpp [ 35%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLRuleConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLRuleConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLRuleConverter.cpp [ 35%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLStripPackageConverter.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.h:63, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'DefaultValues* ListOfLocalRenderInformation::createDefaultValues()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:417:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'LocalRenderInformation* ListOfLocalRenderInformation::createLocalRenderInformation()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:581:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'virtual SBase* ListOfLocalRenderInformation::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:785:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'virtual void ListOfLocalRenderInformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:842:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ [ 35%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLUnitsConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/conversion/SBMLUnitsConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLUnitsConverter.cpp [ 35%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/ASTBasePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/ASTBasePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/ASTBasePlugin.cpp [ 35%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/ISBMLExtensionNamespaces.cpp [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp [ 35%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLDocumentPlugin.cpp [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp [ 36%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLDocumentPluginNotRequired.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.h:62, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp:33: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp: In member function 'LocalStyle* ListOfLocalStyles::createLocalStyle()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp:294:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp: In member function 'virtual SBase* ListOfLocalStyles::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp:359:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 36%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBMLExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.cpp [ 36%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionException.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionException.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtensionException.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp: In member function 'LocalStyle* LocalRenderInformation::createLocalStyle()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:334:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp: In member function 'LocalStyle* LocalRenderInformation::createStyle(const string&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:358:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp: In member function 'virtual void LocalRenderInformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:830:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ [ 36%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtensionNamespaces.cpp [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LocalStyle.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LocalStyle.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalStyle.cpp [ 36%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionRegistry.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionRegistry.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtensionRegistry.cpp [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Polygon.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Polygon.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RadialGradient.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RadialGradient.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RadialGradient.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtensionRegistry.cpp: In member function 'bool SBMLExtensionRegistry::setEnabled(const string&, bool)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtensionRegistry.cpp:350:56: warning: suggest parentheses around assignment used as truth value [-Wparentheses] BUILDSTDERR: return (sbmlext) ? sbmlext->mIsEnabled = isEnabled : false; BUILDSTDERR: ^~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalStyle.cpp: In member function 'virtual void LocalStyle::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/LocalStyle.cpp:321:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ [ 36%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBaseExtensionPoint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBaseExtensionPoint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBaseExtensionPoint.cpp [ 36%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBasePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBasePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:55, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:62, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp: In constructor 'Polygon::Polygon(const XMLNode&, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:115:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp: In member function 'RenderPoint* Polygon::createPoint()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:416:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp: In member function 'RenderCubicBezier* Polygon::createCubicBezier()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:444:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp: In member function 'virtual void Polygon::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:829:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ [ 36%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBasePluginCreatorBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/extension/SBasePluginCreatorBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePluginCreatorBase.cpp [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Rectangle.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Rectangle.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Rectangle.cpp [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RelAbsVector.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RelAbsVector.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RelAbsVector.cpp [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCubicBezier.cpp [ 36%] Building CXX object src/CMakeFiles/sbml.dir/sbml/AlgebraicRule.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/AlgebraicRule.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AlgebraicRule.cpp [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCurve.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCurve.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp [ 36%] Building CXX object src/CMakeFiles/sbml.dir/sbml/AssignmentRule.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/AssignmentRule.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AssignmentRule.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AlgebraicRule.cpp: In function 'AlgebraicRule_t* AlgebraicRule_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AlgebraicRule.cpp:401:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AlgebraicRule.cpp: In function 'AlgebraicRule_t* AlgebraicRule_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AlgebraicRule.cpp:417:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 36%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Compartment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Compartment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Compartment.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:59, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Dimensions.h:56, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/Layout.h:58, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/util/LayoutAnnotation.h:40, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp: In member function 'RenderPoint* RenderCurve::createPoint()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp:468:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp: In member function 'RenderCubicBezier* RenderCurve::createCubicBezier()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp:496:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AssignmentRule.cpp: In function 'AssignmentRule_t* AssignmentRule_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AssignmentRule.cpp:525:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AssignmentRule.cpp: In function 'AssignmentRule_t* AssignmentRule_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AssignmentRule.cpp:541:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 36%] Building CXX object src/CMakeFiles/sbml.dir/sbml/CompartmentType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/CompartmentType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/CompartmentType.cpp [ 36%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Constraint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Constraint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Constraint.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Compartment.cpp: In function 'Compartment_t* Compartment_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Compartment.cpp:2094:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Compartment.cpp: In function 'Compartment_t* Compartment_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Compartment.cpp:2110:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/CompartmentType.cpp: In function 'CompartmentType_t* CompartmentType_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/CompartmentType.cpp:876:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/CompartmentType.cpp: In function 'CompartmentType_t* CompartmentType_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/CompartmentType.cpp:892:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Constraint.cpp: In function 'Constraint_t* Constraint_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Constraint.cpp:1136:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Constraint.cpp: In function 'Constraint_t* Constraint_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Constraint.cpp:1152:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 37%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Delay.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Delay.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Delay.cpp [ 37%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderGroup.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderGroup.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Event.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Event.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Event.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Delay.cpp: In function 'Delay_t* Delay_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Delay.cpp:884:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Delay.cpp: In function 'Delay_t* Delay_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Delay.cpp:900:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h: In constructor 'RenderGroup::RenderGroup(unsigned int, unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:88:15: warning: 'RenderGroup::mEndHead' will be initialized after [-Wreorder] BUILDSTDERR: std::string mEndHead; BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:81:15: warning: 'std::__cxx11::string RenderGroup::mFontFamily' [-Wreorder] BUILDSTDERR: std::string mFontFamily; BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:76:1: warning: when initialized here [-Wreorder] BUILDSTDERR: RenderGroup::RenderGroup(unsigned int level, BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:86:7: warning: 'RenderGroup::mVTextAnchor' will be initialized after [-Wreorder] BUILDSTDERR: int mVTextAnchor; BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:82:16: warning: 'RelAbsVector RenderGroup::mFontSize' [-Wreorder] BUILDSTDERR: RelAbsVector mFontSize; BUILDSTDERR: ^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:76:1: warning: when initialized here [-Wreorder] BUILDSTDERR: RenderGroup::RenderGroup(unsigned int level, BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h: In constructor 'RenderGroup::RenderGroup(RenderPkgNamespaces*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:88:15: warning: 'RenderGroup::mEndHead' will be initialized after [-Wreorder] BUILDSTDERR: std::string mEndHead; BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:81:15: warning: 'std::__cxx11::string RenderGroup::mFontFamily' [-Wreorder] BUILDSTDERR: std::string mFontFamily; BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:99:1: warning: when initialized here [-Wreorder] BUILDSTDERR: RenderGroup::RenderGroup(RenderPkgNamespaces *renderns) BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:86:7: warning: 'RenderGroup::mVTextAnchor' will be initialized after [-Wreorder] BUILDSTDERR: int mVTextAnchor; BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:82:16: warning: 'RelAbsVector RenderGroup::mFontSize' [-Wreorder] BUILDSTDERR: RelAbsVector mFontSize; BUILDSTDERR: ^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:99:1: warning: when initialized here [-Wreorder] BUILDSTDERR: RenderGroup::RenderGroup(RenderPkgNamespaces *renderns) BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.h:69, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'ColorDefinition* RenderInformationBase::createColorDefinition()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:729:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h: In copy constructor 'RenderGroup::RenderGroup(const RenderGroup&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:88:15: warning: 'RenderGroup::mEndHead' will be initialized after [-Wreorder] BUILDSTDERR: std::string mEndHead; BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:81:15: warning: 'std::__cxx11::string RenderGroup::mFontFamily' [-Wreorder] BUILDSTDERR: std::string mFontFamily; BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:260:1: warning: when initialized here [-Wreorder] BUILDSTDERR: RenderGroup::RenderGroup(const RenderGroup& orig) BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:86:7: warning: 'RenderGroup::mVTextAnchor' will be initialized after [-Wreorder] BUILDSTDERR: int mVTextAnchor; BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:82:16: warning: 'RelAbsVector RenderGroup::mFontSize' [-Wreorder] BUILDSTDERR: RelAbsVector mFontSize; BUILDSTDERR: ^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:260:1: warning: when initialized here [-Wreorder] BUILDSTDERR: RenderGroup::RenderGroup(const RenderGroup& orig) BUILDSTDERR: ^~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'LinearGradient* RenderInformationBase::createLinearGradientDefinition()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:891:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'RadialGradient* RenderInformationBase::createRadialGradientDefinition()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:919:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'LineEnding* RenderInformationBase::createLineEnding()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:1081:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:55, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:62, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:67, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Image* RenderGroup::createImage()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1109:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Ellipse* RenderGroup::createEllipse()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1137:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Rectangle* RenderGroup::createRectangle()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1165:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Polygon* RenderGroup::createPolygon()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1193:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/EventAssignment.cpp.o BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'RenderGroup* RenderGroup::createGroup()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1221:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'LineEnding* RenderGroup::createLineEnding()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1249:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/EventAssignment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/EventAssignment.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Text* RenderGroup::createText()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1277:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'RenderCurve* RenderGroup::createCurve()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1305:5: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'void RenderGroup::importOldCurve(const XMLNode&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:2622:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, this->getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Event.cpp: In function 'Event_t* Event_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Event.cpp:2370:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Event.cpp: In function 'Event_t* Event_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Event.cpp:2386:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderPoint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderPoint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/RenderPoint.cpp [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/ExpectedAttributes.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/ExpectedAttributes.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ExpectedAttributes.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/EventAssignment.cpp: In function 'EventAssignment_t* EventAssignment_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/EventAssignment.cpp:1289:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/EventAssignment.cpp: In function 'EventAssignment_t* EventAssignment_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/EventAssignment.cpp:1305:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/FunctionDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/FunctionDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/FunctionDefinition.cpp [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/InitialAssignment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/InitialAssignment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/InitialAssignment.cpp [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/KineticLaw.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/KineticLaw.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/KineticLaw.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/FunctionDefinition.cpp: In function 'FunctionDefinition_t* FunctionDefinition_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/FunctionDefinition.cpp:1361:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/FunctionDefinition.cpp: In function 'FunctionDefinition_t* FunctionDefinition_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/FunctionDefinition.cpp:1377:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Style.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Style.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/InitialAssignment.cpp: In function 'InitialAssignment_t* InitialAssignment_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/InitialAssignment.cpp:1271:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/InitialAssignment.cpp: In function 'InitialAssignment_t* InitialAssignment_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/InitialAssignment.cpp:1287:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/KineticLaw.cpp: In function 'KineticLaw_t* KineticLaw_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/KineticLaw.cpp:2063:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/KineticLaw.cpp: In function 'KineticLaw_t* KineticLaw_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/KineticLaw.cpp:2079:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/ListOf.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/ListOf.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ListOf.cpp [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/LocalParameter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/LocalParameter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/LocalParameter.cpp [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Text.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Text.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.h:64, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp: In member function 'RenderGroup* Style::createGroup()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp:588:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp: In member function 'virtual SBase* Style::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:112:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLExtensionException e)\ BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.h:128:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' BUILDSTDERR: EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension/RenderExtension.h:57:3: note: in expansion of macro 'EXTENSION_CREATE_NS' BUILDSTDERR: EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Style.cpp:1260:3: note: in expansion of macro 'RENDER_CREATE_NS' BUILDSTDERR: RENDER_CREATE_NS(renderns, getSBMLNamespaces()); BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/LocalParameter.cpp: In function 'LocalParameter_t* LocalParameter_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/LocalParameter.cpp:828:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/LocalParameter.cpp: In function 'LocalParameter_t* LocalParameter_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/LocalParameter.cpp:844:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.cpp:34: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h: In copy constructor 'Text::Text(const Text&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h:116:7: warning: 'Text::mVTextAnchor' will be initialized after [-Wreorder] BUILDSTDERR: int mVTextAnchor; BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.h:112:16: warning: 'RelAbsVector Text::mFontSize' [-Wreorder] BUILDSTDERR: RelAbsVector mFontSize; BUILDSTDERR: ^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Text.cpp:198:1: warning: when initialized here [-Wreorder] BUILDSTDERR: Text::Text(const Text& orig) BUILDSTDERR: ^~~~ [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Model.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Model.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Model.cpp [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/ModifierSpeciesReference.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/ModifierSpeciesReference.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ModifierSpeciesReference.cpp [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Parameter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Parameter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Parameter.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Model.cpp: In function 'Model_t* Model_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Model.cpp:7406:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Model.cpp: In function 'Model_t* Model_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Model.cpp:7422:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ModifierSpeciesReference.cpp: In function 'ModifierSpeciesReference_t* ModifierSpeciesReference_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ModifierSpeciesReference.cpp:431:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ModifierSpeciesReference.cpp: In function 'ModifierSpeciesReference_t* ModifierSpeciesReference_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ModifierSpeciesReference.cpp:447:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Parameter.cpp: In function 'Parameter_t* Parameter_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Parameter.cpp:1990:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Parameter.cpp: In function 'Parameter_t* Parameter_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Parameter.cpp:2006:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation.cpp [ 39%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Priority.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Priority.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Priority.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation.cpp:500:1: warning: "/*" within comment [-Wcomment] BUILDSTDERR: /* BUILDSTDERR: [ 39%] Building CXX object src/CMakeFiles/sbml.dir/sbml/RateRule.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/RateRule.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/RateRule.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation.cpp: In member function 'virtual void Transformation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation.cpp:798:16: warning: unused variable 'pkgVersion' [-Wunused-variable] BUILDSTDERR: unsigned int pkgVersion = getPackageVersion(); BUILDSTDERR: ^~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Priority.cpp: In function 'Priority_t* Priority_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Priority.cpp:732:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Priority.cpp: In function 'Priority_t* Priority_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Priority.cpp:748:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation2D.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation2D.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation2D.cpp [ 39%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Reaction.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Reaction.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Reaction.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/RateRule.cpp: In function 'RateRule_t* RateRule_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/RateRule.cpp:523:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/RateRule.cpp: In function 'RateRule_t* RateRule_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/RateRule.cpp:539:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 39%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Rule.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Rule.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/util/RenderLayoutConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/util/RenderLayoutConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util/RenderLayoutConverter.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation2D.cpp: In member function 'virtual void Transformation2D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/Transformation2D.cpp:714:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Reaction.cpp: In function 'Reaction_t* Reaction_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Reaction.cpp:2675:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Reaction.cpp: In function 'Reaction_t* Reaction_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Reaction.cpp:2691:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/util/RenderUtilities.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/util/RenderUtilities.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util/RenderUtilities.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAlgebraic(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1908:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAlgebraicWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1924:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAssignment(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1940:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAssignmentWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1956:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createRate(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1972:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createRateWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1988:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 39%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLConstructorException.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLConstructorException.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLConstructorException.cpp [ 39%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLConvert.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLConvert.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLConvert.cpp [ 39%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLDocument.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLDocument.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/RenderConsistencyValidator.cpp [ 39%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLError.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLError.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLError.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp: In function 'SBMLDocument_t* SBMLDocument_create()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp:2252:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp: In function 'SBMLDocument_t* SBMLDocument_createWithLevelAndVersion(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp:2268:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp: In function 'SBMLDocument_t* SBMLDocument_createWithSBMLNamespaces(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp:2284:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp [ 39%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLErrorLog.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLErrorLog.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLErrorLog.cpp [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/RenderValidator.cpp [ 39%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLNamespaces.cpp [ 39%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLReader.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLReader.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLReader.cpp [ 39%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLTransforms.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLTransforms.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLTransforms.cpp [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/annotation/CVTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/annotation/CVTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/CVTerm.cpp [ 40%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLVisitor.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLVisitor.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLVisitor.cpp [ 40%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLTypeCodes.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLTypeCodes.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLTypeCodes.cpp [ 40%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLWriter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBMLWriter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLWriter.cpp [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/annotation/Date.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/annotation/Date.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/annotation/ModelCreator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/annotation/ModelCreator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/ModelCreator.cpp [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/annotation/ModelHistory.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/annotation/ModelHistory.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/ModelHistory.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp: In member function 'void Date::parseDateNumbersToString()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:459:25: warning: '%u' directive output may be truncated writing between 2 and 10 bytes into a region of size between 0 and 8 [-Wformat-truncation=] BUILDSTDERR: snprintf(cdate, 10, "%u-%u-", mYear, mMonth); BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:459:25: note: directive argument in the range [10, 4294967295] BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 6 and 23 bytes into a destination of size 10 BUILDSTDERR: return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:465:25: warning: 'T' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] BUILDSTDERR: snprintf(cdate, 10, "%uT", mDay); BUILDSTDERR: ^~~~~ BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 4 and 12 bytes into a destination of size 10 BUILDSTDERR: return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:471:25: warning: ':' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] BUILDSTDERR: snprintf(cdate, 10, "%u:", mHour); BUILDSTDERR: ^~~~~ BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 4 and 12 bytes into a destination of size 10 BUILDSTDERR: return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:477:25: warning: ':' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] BUILDSTDERR: snprintf(cdate, 10, "%u:", mMinute); BUILDSTDERR: ^~~~~ BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 4 and 12 bytes into a destination of size 10 BUILDSTDERR: return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:483:25: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] BUILDSTDERR: snprintf(cdate, 10, "%u", mSecond); BUILDSTDERR: ^~~~ BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 3 and 11 bytes into a destination of size 10 BUILDSTDERR: return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:502:27: warning: ':' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] BUILDSTDERR: snprintf(cdate, 10, "%u:", mHoursOffset); BUILDSTDERR: ^~~~~ BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 4 and 12 bytes into a destination of size 10 BUILDSTDERR: return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:508:27: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] BUILDSTDERR: snprintf(cdate, 10, "%u", mMinutesOffset); BUILDSTDERR: ^~~~ BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.h:234, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.h:117, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.h:151, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.h:184, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/Date.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 3 and 11 bytes into a destination of size 10 BUILDSTDERR: return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBO.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBO.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBO.cpp [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBase.cpp [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/annotation/RDFAnnotationParser.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/annotation/RDFAnnotationParser.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/RDFAnnotationParser.cpp [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SimpleSpeciesReference.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SimpleSpeciesReference.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SimpleSpeciesReference.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBase.cpp: In member function 'virtual void SBase::writeAttributes(XMLOutputStream&) const': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBase.cpp:5895:16: warning: unused variable 'pkgCoreVersion' [-Wunused-variable] BUILDSTDERR: unsigned int pkgCoreVersion = getPackageCoreVersion(); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Species.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Species.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Species.cpp [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SpeciesReference.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SpeciesReference.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/common/libsbml-version.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/common/libsbml-version.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/common/libsbml-version.cpp [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/common/operationReturnValues.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/common/operationReturnValues.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/common/operationReturnValues.cpp [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/ConversionOption.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/ConversionOption.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/ConversionOption.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Species.cpp: In function 'Species_t* Species_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Species.cpp:2657:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Species.cpp: In function 'Species_t* Species_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Species.cpp:2673:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp:1969:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp:1985:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_createModifier(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp:2001:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_createModifierWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp:2017:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/ConversionProperties.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/ConversionProperties.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/ConversionProperties.cpp [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesType.cpp [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/StoichiometryMath.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/StoichiometryMath.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/StoichiometryMath.cpp [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SyntaxChecker.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/SyntaxChecker.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SyntaxChecker.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesType.cpp: In function 'SpeciesType_t* SpeciesType_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesType.cpp:874:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesType.cpp: In function 'SpeciesType_t* SpeciesType_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesType.cpp:890:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/StoichiometryMath.cpp: In function 'StoichiometryMath_t* StoichiometryMath_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/StoichiometryMath.cpp:638:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/StoichiometryMath.cpp: In function 'StoichiometryMath_t* StoichiometryMath_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/StoichiometryMath.cpp:654:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLConverter.cpp [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/RegisterConverters.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/RegisterConverters.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/RegisterConverters.cpp [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Trigger.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Trigger.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Trigger.cpp [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLConverterRegistry.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLConverterRegistry.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLConverterRegistry.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Trigger.cpp: In function 'Trigger_t* Trigger_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Trigger.cpp:1008:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Trigger.cpp: In function 'Trigger_t* Trigger_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Trigger.cpp:1024:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLFunctionDefinitionConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLFunctionDefinitionConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLFunctionDefinitionConverter.cpp [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLIdConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLIdConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLIdConverter.cpp [ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLInferUnitsConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLInferUnitsConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLInferUnitsConverter.cpp [ 42%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Unit.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/Unit.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Unit.cpp [ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLInitialAssignmentConverter.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Unit.cpp: In function 'Unit_t* Unit_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Unit.cpp:2695:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Unit.cpp: In function 'Unit_t* Unit_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Unit.cpp:2711:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/UnitDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/UnitDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitDefinition.cpp [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLLevel1Version1Converter.cpp [ 43%] Building C object src/CMakeFiles/sbml.dir/sbml/UnitKind.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/UnitKind.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitKind.c [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLLevelVersionConverter.cpp [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLLocalParameterConverter.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitDefinition.cpp: In function 'UnitDefinition_t* UnitDefinition_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitDefinition.cpp:2420:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitDefinition.cpp: In function 'UnitDefinition_t* UnitDefinition_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitDefinition.cpp:2436:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/units/FormulaUnitsData.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/units/FormulaUnitsData.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/FormulaUnitsData.cpp [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRateOfConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRateOfConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLRateOfConverter.cpp [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLReactionConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLReactionConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLReactionConverter.cpp [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRuleConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRuleConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLRuleConverter.cpp [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/units/UnitFormulaFormatter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/units/UnitFormulaFormatter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/UnitFormulaFormatter.cpp [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/units/UnitKindList.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/units/UnitKindList.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/UnitKindList.cpp [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/ElementFilter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/ElementFilter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/ElementFilter.cpp [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/IdFilter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/IdFilter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/IdFilter.cpp [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/IdList.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/IdList.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/IdList.cpp [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLStripPackageConverter.cpp [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/IdentifierTransformer.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/IdentifierTransformer.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/IdentifierTransformer.cpp [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLUnitsConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLUnitsConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/SBMLUnitsConverter.cpp [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/ASTBasePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/extension/ASTBasePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/ASTBasePlugin.cpp [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/List.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/List.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/List.cpp [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/MetaIdFilter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/MetaIdFilter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/MetaIdFilter.cpp [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/ISBMLExtensionNamespaces.cpp [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/PrefixTransformer.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/PrefixTransformer.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/PrefixTransformer.cpp [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/util.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/util.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/util.cpp [ 44%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLDocumentPlugin.cpp [ 44%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLDocumentPluginNotRequired.cpp [ 45%] Building C object src/CMakeFiles/sbml.dir/sbml/util/Stack.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/Stack.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/Stack.c [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtension.cpp [ 45%] Building C object src/CMakeFiles/sbml.dir/sbml/util/StringBuffer.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/StringBuffer.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/StringBuffer.c [ 45%] Building C object src/CMakeFiles/sbml.dir/sbml/util/memory.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/util/memory.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/memory.c [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/ConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/ConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/ConsistencyValidator.cpp [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/IdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/IdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/IdentifierConsistencyValidator.cpp [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionException.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionException.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtensionException.cpp [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtensionNamespaces.cpp [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/InternalConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/InternalConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/InternalConsistencyValidator.cpp [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionRegistry.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionRegistry.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtensionRegistry.cpp [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/L1CompatibilityValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/L1CompatibilityValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/L1CompatibilityValidator.cpp [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBaseExtensionPoint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/extension/SBaseExtensionPoint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBaseExtensionPoint.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtensionRegistry.cpp: In member function 'bool SBMLExtensionRegistry::setEnabled(const string&, bool)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBMLExtensionRegistry.cpp:350:56: warning: suggest parentheses around assignment used as truth value [-Wparentheses] BUILDSTDERR: return (sbmlext) ? sbmlext->mIsEnabled = isEnabled : false; BUILDSTDERR: ^~~~~ [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/L2v1CompatibilityValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/L2v1CompatibilityValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/L2v1CompatibilityValidator.cpp [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/L2v2CompatibilityValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/L2v2CompatibilityValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/L2v2CompatibilityValidator.cpp [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBasePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/extension/SBasePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePlugin.cpp [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/L2v3CompatibilityValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/L2v3CompatibilityValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/L2v3CompatibilityValidator.cpp [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/L2v4CompatibilityValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/L2v4CompatibilityValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/L2v4CompatibilityValidator.cpp [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBasePluginCreatorBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/extension/SBasePluginCreatorBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/SBasePluginCreatorBase.cpp [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/L3v1CompatibilityValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/L3v1CompatibilityValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/L3v1CompatibilityValidator.cpp [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/AlgebraicRule.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/AlgebraicRule.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AlgebraicRule.cpp [ 46%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/L3v2CompatibilityValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/L3v2CompatibilityValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/L3v2CompatibilityValidator.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AlgebraicRule.cpp: In function 'AlgebraicRule_t* AlgebraicRule_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AlgebraicRule.cpp:401:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AlgebraicRule.cpp: In function 'AlgebraicRule_t* AlgebraicRule_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AlgebraicRule.cpp:417:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 46%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/AssignmentRule.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/AssignmentRule.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AssignmentRule.cpp [ 46%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Compartment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Compartment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Compartment.cpp [ 46%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/CompartmentType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/CompartmentType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/CompartmentType.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AssignmentRule.cpp: In function 'AssignmentRule_t* AssignmentRule_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AssignmentRule.cpp:525:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AssignmentRule.cpp: In function 'AssignmentRule_t* AssignmentRule_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/AssignmentRule.cpp:541:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Compartment.cpp: In function 'Compartment_t* Compartment_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Compartment.cpp:2094:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Compartment.cpp: In function 'Compartment_t* Compartment_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Compartment.cpp:2110:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/CompartmentType.cpp: In function 'CompartmentType_t* CompartmentType_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/CompartmentType.cpp:876:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/CompartmentType.cpp: In function 'CompartmentType_t* CompartmentType_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/CompartmentType.cpp:892:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Constraint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Constraint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Constraint.cpp [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/MathMLConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/MathMLConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/MathMLConsistencyValidator.cpp [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/ModelingPracticeValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/ModelingPracticeValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/ModelingPracticeValidator.cpp [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/OverdeterminedValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/OverdeterminedValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/OverdeterminedValidator.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Constraint.cpp: In function 'Constraint_t* Constraint_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Constraint.cpp:1136:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Constraint.cpp: In function 'Constraint_t* Constraint_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Constraint.cpp:1152:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Delay.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Delay.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Delay.cpp [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/SBMLExternalValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/SBMLExternalValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/SBMLExternalValidator.cpp [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/SBMLInternalValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/SBMLInternalValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/SBMLInternalValidator.cpp [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Event.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Event.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Event.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Delay.cpp: In function 'Delay_t* Delay_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Delay.cpp:884:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Delay.cpp: In function 'Delay_t* Delay_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Delay.cpp:900:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/SBMLValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/SBMLValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/SBMLValidator.cpp [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/SBOConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/SBOConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/SBOConsistencyValidator.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Event.cpp: In function 'Event_t* Event_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Event.cpp:2370:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Event.cpp: In function 'Event_t* Event_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Event.cpp:2386:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/EventAssignment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/EventAssignment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/EventAssignment.cpp [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/StrictUnitConsistencyValidator.cpp [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/UnitConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/UnitConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/UnitConsistencyValidator.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/EventAssignment.cpp: In function 'EventAssignment_t* EventAssignment_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/EventAssignment.cpp:1289:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/EventAssignment.cpp: In function 'EventAssignment_t* EventAssignment_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/EventAssignment.cpp:1305:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/ExpectedAttributes.cpp.o [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/VConstraint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/ExpectedAttributes.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ExpectedAttributes.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/VConstraint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/VConstraint.cpp [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/FunctionDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/FunctionDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/FunctionDefinition.cpp [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/Validator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/Validator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/Validator.cpp [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/InitialAssignment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/InitialAssignment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/InitialAssignment.cpp [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/ArgumentsUnitsCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/ArgumentsUnitsCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/ArgumentsUnitsCheck.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/FunctionDefinition.cpp: In function 'FunctionDefinition_t* FunctionDefinition_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/FunctionDefinition.cpp:1361:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/FunctionDefinition.cpp: In function 'FunctionDefinition_t* FunctionDefinition_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/FunctionDefinition.cpp:1377:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/InitialAssignment.cpp: In function 'InitialAssignment_t* InitialAssignment_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/InitialAssignment.cpp:1271:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/InitialAssignment.cpp: In function 'InitialAssignment_t* InitialAssignment_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/InitialAssignment.cpp:1287:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/KineticLaw.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/KineticLaw.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/KineticLaw.cpp [ 48%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp [ 48%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/ListOf.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/ListOf.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ListOf.cpp [ 48%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/LocalParameter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/LocalParameter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/LocalParameter.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/KineticLaw.cpp: In function 'KineticLaw_t* KineticLaw_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/KineticLaw.cpp:2063:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/KineticLaw.cpp: In function 'KineticLaw_t* KineticLaw_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/KineticLaw.cpp:2079:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/LocalParameter.cpp: In function 'LocalParameter_t* LocalParameter_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/LocalParameter.cpp:828:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/LocalParameter.cpp: In function 'LocalParameter_t* LocalParameter_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/LocalParameter.cpp:844:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 48%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Model.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Model.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Model.cpp [ 48%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/ModifierSpeciesReference.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/ModifierSpeciesReference.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ModifierSpeciesReference.cpp [ 48%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/AssignmentCycles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/AssignmentCycles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/AssignmentCycles.cpp [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Parameter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Parameter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Parameter.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ModifierSpeciesReference.cpp: In function 'ModifierSpeciesReference_t* ModifierSpeciesReference_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ModifierSpeciesReference.cpp:431:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ModifierSpeciesReference.cpp: In function 'ModifierSpeciesReference_t* ModifierSpeciesReference_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/ModifierSpeciesReference.cpp:447:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Model.cpp: In function 'Model_t* Model_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Model.cpp:7406:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Model.cpp: In function 'Model_t* Model_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Model.cpp:7422:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/AssignmentRuleOrdering.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/AssignmentRuleOrdering.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/AssignmentRuleOrdering.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Parameter.cpp: In function 'Parameter_t* Parameter_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Parameter.cpp:1990:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Parameter.cpp: In function 'Parameter_t* Parameter_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Parameter.cpp:2006:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Priority.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Priority.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Priority.cpp [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/CiElementMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/CiElementMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/CiElementMathCheck.cpp [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/RateRule.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/RateRule.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/RateRule.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Priority.cpp: In function 'Priority_t* Priority_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Priority.cpp:732:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Priority.cpp: In function 'Priority_t* Priority_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Priority.cpp:748:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/CiElementNot0DComp.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/CiElementNot0DComp.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/CiElementNot0DComp.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/RateRule.cpp: In function 'RateRule_t* RateRule_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/RateRule.cpp:523:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/RateRule.cpp: In function 'RateRule_t* RateRule_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/RateRule.cpp:539:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Reaction.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Reaction.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Reaction.cpp [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Rule.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Rule.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLConstructorException.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBMLConstructorException.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLConstructorException.cpp [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/CompartmentOutsideCycles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/CompartmentOutsideCycles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/CompartmentOutsideCycles.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Reaction.cpp: In function 'Reaction_t* Reaction_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Reaction.cpp:2675:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Reaction.cpp: In function 'Reaction_t* Reaction_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Reaction.cpp:2691:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLConvert.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBMLConvert.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLConvert.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAlgebraic(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1908:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAlgebraicWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1924:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAssignment(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1940:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAssignmentWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1956:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createRate(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1972:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createRateWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Rule.cpp:1988:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLDocument.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBMLDocument.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLError.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBMLError.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLError.cpp [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLErrorLog.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBMLErrorLog.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLErrorLog.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp: In function 'SBMLDocument_t* SBMLDocument_create()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp:2252:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp: In function 'SBMLDocument_t* SBMLDocument_createWithLevelAndVersion(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp:2268:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp: In function 'SBMLDocument_t* SBMLDocument_createWithSBMLNamespaces(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLDocument.cpp:2284:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/EqualityArgsMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/EqualityArgsMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/EqualityArgsMathCheck.cpp [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/ExponentUnitsCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/ExponentUnitsCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/ExponentUnitsCheck.cpp [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionApplyMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionApplyMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/FunctionApplyMathCheck.cpp [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionDefinitionRecursion.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionDefinitionRecursion.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/FunctionDefinitionRecursion.cpp [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBMLNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLNamespaces.cpp [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionDefinitionVars.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionDefinitionVars.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/FunctionDefinitionVars.cpp [ 50%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp [ 50%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionReferredToExists.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionReferredToExists.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/FunctionReferredToExists.cpp [ 50%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLReader.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBMLReader.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLReader.cpp [ 50%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/IdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/IdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/IdBase.cpp [ 50%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLTransforms.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBMLTransforms.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLTransforms.cpp [ 50%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/IdNameNewOnSBase.cpp [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLTypeCodes.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBMLTypeCodes.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLTypeCodes.cpp [ 51%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/KineticLawUnitsCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/KineticLawUnitsCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/KineticLawUnitsCheck.cpp [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLVisitor.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBMLVisitor.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLVisitor.cpp [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLWriter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBMLWriter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBMLWriter.cpp [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBO.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBO.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBO.cpp [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBase.cpp [ 51%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/KineticLawVars.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/KineticLawVars.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/KineticLawVars.cpp [ 51%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/LambdaMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/LambdaMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/LambdaMathCheck.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBase.cpp: In member function 'virtual void SBase::writeAttributes(XMLOutputStream&) const': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SBase.cpp:5895:16: warning: unused variable 'pkgCoreVersion' [-Wunused-variable] BUILDSTDERR: unsigned int pkgCoreVersion = getPackageCoreVersion(); BUILDSTDERR: ^~~~~~~~~~~~~~ [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SimpleSpeciesReference.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SimpleSpeciesReference.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SimpleSpeciesReference.cpp [ 51%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/LocalParameterMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/LocalParameterMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/LocalParameterMathCheck.cpp [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Species.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Species.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Species.cpp [ 51%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp [ 51%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/LogicalArgsMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/LogicalArgsMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/LogicalArgsMathCheck.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Species.cpp: In function 'Species_t* Species_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Species.cpp:2657:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Species.cpp: In function 'Species_t* Species_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Species.cpp:2673:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SpeciesReference.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SpeciesReference.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesType.cpp [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/StoichiometryMath.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/StoichiometryMath.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/StoichiometryMath.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp:1969:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp:1985:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_createModifier(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp:2001:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_createModifierWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesReference.cpp:2017:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesType.cpp: In function 'SpeciesType_t* SpeciesType_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesType.cpp:874:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesType.cpp: In function 'SpeciesType_t* SpeciesType_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SpeciesType.cpp:890:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/StoichiometryMath.cpp: In function 'StoichiometryMath_t* StoichiometryMath_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/StoichiometryMath.cpp:638:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/StoichiometryMath.cpp: In function 'StoichiometryMath_t* StoichiometryMath_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/StoichiometryMath.cpp:654:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 51%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/ModelUnitsDangling.cpp.o [ 51%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/MathMLBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/MathMLBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/MathMLBase.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/ModelUnitsDangling.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/ModelUnitsDangling.cpp [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SyntaxChecker.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/SyntaxChecker.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/SyntaxChecker.cpp [ 51%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Trigger.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Trigger.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Trigger.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Trigger.cpp: In function 'Trigger_t* Trigger_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Trigger.cpp:1008:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Trigger.cpp: In function 'Trigger_t* Trigger_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Trigger.cpp:1024:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 52%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Unit.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/Unit.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Unit.cpp [ 52%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/UnitDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/UnitDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitDefinition.cpp [ 52%] Building C object src/CMakeFiles/sbml-static.dir/sbml/UnitKind.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/UnitKind.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitKind.c [ 52%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/units/FormulaUnitsData.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/units/FormulaUnitsData.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/FormulaUnitsData.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Unit.cpp: In function 'Unit_t* Unit_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Unit.cpp:2695:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Unit.cpp: In function 'Unit_t* Unit_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/Unit.cpp:2711:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitDefinition.cpp: In function 'UnitDefinition_t* UnitDefinition_create(unsigned int, unsigned int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitDefinition.cpp:2420:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitDefinition.cpp: In function 'UnitDefinition_t* UnitDefinition_createWithNS(SBMLNamespaces_t*)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/UnitDefinition.cpp:2436:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] BUILDSTDERR: catch (SBMLConstructorException) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ [ 52%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/NumberArgsMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/NumberArgsMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/NumberArgsMathCheck.cpp [ 52%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/units/UnitFormulaFormatter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/units/UnitFormulaFormatter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/UnitFormulaFormatter.cpp [ 52%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/units/UnitKindList.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/units/UnitKindList.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/UnitKindList.cpp [ 52%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/ElementFilter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/util/ElementFilter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/ElementFilter.cpp [ 52%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/IdFilter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/util/IdFilter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/IdFilter.cpp [ 53%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/NumericArgsMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/NumericArgsMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/NumericArgsMathCheck.cpp [ 53%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/NumericReturnMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/NumericReturnMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/NumericReturnMathCheck.cpp [ 53%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/IdList.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/util/IdList.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/IdList.cpp [ 53%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/IdentifierTransformer.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/util/IdentifierTransformer.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/IdentifierTransformer.cpp [ 53%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/List.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/util/List.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/List.cpp [ 53%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/MetaIdFilter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/util/MetaIdFilter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/MetaIdFilter.cpp [ 53%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/OverDeterminedCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/OverDeterminedCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/OverDeterminedCheck.cpp [ 53%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/PrefixTransformer.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/util/PrefixTransformer.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/PrefixTransformer.cpp [ 54%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/util/util.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/util/util.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/util.cpp [ 54%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/PieceBooleanMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/PieceBooleanMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/PieceBooleanMathCheck.cpp [ 54%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/PiecewiseValueMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/PiecewiseValueMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/PiecewiseValueMathCheck.cpp [ 54%] Building C object src/CMakeFiles/sbml-static.dir/sbml/util/Stack.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/util/Stack.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/Stack.c [ 54%] Building C object src/CMakeFiles/sbml-static.dir/sbml/util/StringBuffer.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/util/StringBuffer.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/StringBuffer.c [ 54%] Building C object src/CMakeFiles/sbml-static.dir/sbml/util/memory.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/util/memory.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/memory.c [ 54%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/ConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/ConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/ConsistencyValidator.cpp [ 54%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/IdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/IdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/IdentifierConsistencyValidator.cpp [ 54%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/InternalConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/InternalConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/InternalConsistencyValidator.cpp [ 54%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/PowerUnitsCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/PowerUnitsCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/PowerUnitsCheck.cpp [ 54%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/L1CompatibilityValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/L1CompatibilityValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/L1CompatibilityValidator.cpp [ 54%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp [ 54%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/L2v1CompatibilityValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/L2v1CompatibilityValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/L2v1CompatibilityValidator.cpp [ 54%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp [ 54%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp [ 54%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/L2v2CompatibilityValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/L2v2CompatibilityValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/L2v2CompatibilityValidator.cpp [ 54%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCycles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCycles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/RateOfCycles.cpp [ 54%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/ReportEmptyListOf.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/ReportEmptyListOf.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/ReportEmptyListOf.cpp [ 54%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/SpeciesReactionOrRule.cpp [ 54%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/L2v3CompatibilityValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/L2v3CompatibilityValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/L2v3CompatibilityValidator.cpp [ 54%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/StoichiometryMathVars.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/StoichiometryMathVars.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/StoichiometryMathVars.cpp [ 54%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/L2v4CompatibilityValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/L2v4CompatibilityValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/L2v4CompatibilityValidator.cpp [ 55%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueIdBase.cpp [ 55%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/L3v1CompatibilityValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/L3v1CompatibilityValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/L3v1CompatibilityValidator.cpp [ 55%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp [ 56%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/L3v2CompatibilityValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/L3v2CompatibilityValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/L3v2CompatibilityValidator.cpp [ 56%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/MathMLConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/MathMLConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/MathMLConsistencyValidator.cpp [ 56%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp [ 56%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/ModelingPracticeValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/ModelingPracticeValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/ModelingPracticeValidator.cpp [ 56%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/OverdeterminedValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/OverdeterminedValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/OverdeterminedValidator.cpp [ 56%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/SBMLExternalValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/SBMLExternalValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/SBMLExternalValidator.cpp [ 56%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsInModel.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsInModel.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueIdsInModel.cpp [ 56%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/SBMLInternalValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/SBMLInternalValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/SBMLInternalValidator.cpp [ 56%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueMetaId.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueMetaId.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueMetaId.cpp [ 56%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp [ 56%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp [ 56%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/SBMLValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/SBMLValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/SBMLValidator.cpp [ 56%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/SBOConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/SBOConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/SBOConsistencyValidator.cpp [ 56%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/StrictUnitConsistencyValidator.cpp [ 56%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp [ 56%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp [ 56%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp [ 56%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/UnitConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/UnitConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/UnitConsistencyValidator.cpp [ 56%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/VConstraint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/VConstraint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/VConstraint.cpp [ 56%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/Validator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/Validator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/Validator.cpp [ 56%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInRules.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInRules.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueVarsInRules.cpp [ 56%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UnitsBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/UnitsBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UnitsBase.cpp [ 57%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ArgumentsUnitsCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ArgumentsUnitsCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/ArgumentsUnitsCheck.cpp [ 57%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp [ 57%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/AssignmentCycles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/AssignmentCycles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/AssignmentCycles.cpp [ 58%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/ValidCnUnitsValue.cpp [ 58%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTBase.cpp [ 58%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTBinaryFunctionNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTBinaryFunctionNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTBinaryFunctionNode.cpp [ 58%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCSymbol.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCSymbol.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCSymbol.cpp [ 58%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/AssignmentRuleOrdering.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/AssignmentRuleOrdering.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/AssignmentRuleOrdering.cpp [ 58%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/CiElementMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/CiElementMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/CiElementMathCheck.cpp [ 58%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCSymbolAvogadroNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCSymbolAvogadroNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCSymbolAvogadroNode.cpp [ 58%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCSymbolDelayNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCSymbolDelayNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCSymbolDelayNode.cpp [ 58%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/CiElementNot0DComp.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/CiElementNot0DComp.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/CiElementNot0DComp.cpp [ 58%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/CompartmentOutsideCycles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/CompartmentOutsideCycles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/CompartmentOutsideCycles.cpp [ 58%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCSymbolRateOfNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCSymbolRateOfNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCSymbolRateOfNode.cpp [ 58%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp [ 58%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/EqualityArgsMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/EqualityArgsMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/EqualityArgsMathCheck.cpp [ 58%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ExponentUnitsCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ExponentUnitsCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/ExponentUnitsCheck.cpp [ 58%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCSymbolTimeNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCSymbolTimeNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCSymbolTimeNode.cpp [ 58%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionApplyMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionApplyMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/FunctionApplyMathCheck.cpp [ 58%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCiFunctionNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCiFunctionNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCiFunctionNode.cpp [ 58%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCiNumberNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCiNumberNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCiNumberNode.cpp [ 58%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionDefinitionRecursion.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionDefinitionRecursion.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/FunctionDefinitionRecursion.cpp [ 58%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCnBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCnBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCnBase.cpp [ 58%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCnExponentialNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCnExponentialNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCnExponentialNode.cpp [ 58%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionDefinitionVars.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionDefinitionVars.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/FunctionDefinitionVars.cpp [ 58%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCnIntegerNode.cpp.o [ 59%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCnRationalNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCnIntegerNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCnIntegerNode.cpp [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCnRationalNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCnRationalNode.cpp [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionReferredToExists.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionReferredToExists.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/FunctionReferredToExists.cpp [ 60%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTCnRealNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTCnRealNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCnRealNode.cpp [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/IdBase.cpp [ 60%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTConstantNumberNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTConstantNumberNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTConstantNumberNode.cpp [ 60%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTFunction.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTFunction.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTFunction.cpp [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/IdNameNewOnSBase.cpp [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawUnitsCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawUnitsCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/KineticLawUnitsCheck.cpp [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawVars.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawVars.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/KineticLawVars.cpp [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/LambdaMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/LambdaMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/LambdaMathCheck.cpp [ 60%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTFunctionBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTFunctionBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTFunctionBase.cpp [ 60%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTLambdaFunctionNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTLambdaFunctionNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTLambdaFunctionNode.cpp [ 60%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTNaryFunctionNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTNaryFunctionNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTNaryFunctionNode.cpp [ 60%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTNode.cpp [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/LocalParameterMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/LocalParameterMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/LocalParameterMathCheck.cpp [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp [ 60%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTNumber.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTNumber.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTNumber.cpp [ 60%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTPiecewiseFunctionNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTPiecewiseFunctionNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTPiecewiseFunctionNode.cpp [ 60%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/LogicalArgsMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/LogicalArgsMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/LogicalArgsMathCheck.cpp [ 60%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTQualifierNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTQualifierNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTQualifierNode.cpp [ 60%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTSemanticsNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTSemanticsNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTSemanticsNode.cpp [ 61%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTTypes.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTTypes.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTTypes.cpp [ 61%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/MathMLBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/MathMLBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/MathMLBase.cpp [ 61%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTUnaryFunctionNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/ASTUnaryFunctionNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTUnaryFunctionNode.cpp [ 61%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/L3Parser.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/L3Parser.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/L3Parser.cpp [ 61%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/L3ParserSettings.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/L3ParserSettings.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/L3ParserSettings.cpp [ 61%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ModelUnitsDangling.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ModelUnitsDangling.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/ModelUnitsDangling.cpp [ 61%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/MathML.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/MathML.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/MathML.cpp [ 61%] Building C object src/CMakeFiles/sbml.dir/sbml/math/FormulaFormatter.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/FormulaFormatter.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/FormulaFormatter.c [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumberArgsMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumberArgsMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/NumberArgsMathCheck.cpp [ 62%] Building C object src/CMakeFiles/sbml.dir/sbml/math/FormulaParser.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/FormulaParser.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/FormulaParser.c [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumericArgsMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumericArgsMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/NumericArgsMathCheck.cpp [ 62%] Building C object src/CMakeFiles/sbml.dir/sbml/math/FormulaTokenizer.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/FormulaTokenizer.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/FormulaTokenizer.c [ 62%] Building C object src/CMakeFiles/sbml.dir/sbml/math/L3FormulaFormatter.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/math/L3FormulaFormatter.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/L3FormulaFormatter.c [ 62%] Building CXX object src/CMakeFiles/sbml.dir/sbml/compress/CompressCommon.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/compress/CompressCommon.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/CompressCommon.cpp [ 62%] Building CXX object src/CMakeFiles/sbml.dir/sbml/compress/InputDecompressor.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/compress/InputDecompressor.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/InputDecompressor.cpp [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumericReturnMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumericReturnMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/NumericReturnMathCheck.cpp [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/OverDeterminedCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/OverDeterminedCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/OverDeterminedCheck.cpp [ 62%] Building CXX object src/CMakeFiles/sbml.dir/sbml/compress/OutputCompressor.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/compress/OutputCompressor.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/OutputCompressor.cpp [ 62%] Building CXX object src/CMakeFiles/sbml.dir/sbml/compress/bzfstream.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/compress/bzfstream.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/bzfstream.cpp [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/PieceBooleanMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/PieceBooleanMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/PieceBooleanMathCheck.cpp [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/PiecewiseValueMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/PiecewiseValueMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/PiecewiseValueMathCheck.cpp [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/PowerUnitsCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/PowerUnitsCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/PowerUnitsCheck.cpp [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCycles.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCycles.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/RateOfCycles.cpp [ 62%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ReportEmptyListOf.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ReportEmptyListOf.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/ReportEmptyListOf.cpp [ 63%] Building CXX object src/CMakeFiles/sbml.dir/sbml/compress/zfstream.cpp.o [ 63%] Building CXX object src/CMakeFiles/sbml.dir/sbml/compress/zipfstream.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/compress/zfstream.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/zfstream.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/compress/zipfstream.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/zipfstream.cpp [ 63%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/SpeciesReactionOrRule.cpp [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/StoichiometryMathVars.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/StoichiometryMathVars.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/StoichiometryMathVars.cpp [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueIdBase.cpp [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsInModel.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsInModel.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueIdsInModel.cpp [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueMetaId.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueMetaId.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueMetaId.cpp [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp [ 64%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLAttributes.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLAttributes.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.cpp [ 64%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLBuffer.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLBuffer.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLBuffer.cpp [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp [ 64%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLConstructorException.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLConstructorException.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLConstructorException.cpp [ 64%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLError.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLError.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLError.cpp [ 64%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLErrorLog.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLErrorLog.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLErrorLog.cpp [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp [ 64%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLLogOverride.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLLogOverride.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLLogOverride.cpp [ 64%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLFileBuffer.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLFileBuffer.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLFileBuffer.cpp [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInRules.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInRules.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UniqueVarsInRules.cpp [ 65%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UnitsBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UnitsBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/UnitsBase.cpp [ 65%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/constraints/ValidCnUnitsValue.cpp [ 65%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTBase.cpp.o [ 65%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLHandler.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLHandler.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLHandler.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTBase.cpp [ 65%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLInputStream.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLInputStream.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLInputStream.cpp [ 65%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLMemoryBuffer.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLMemoryBuffer.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLMemoryBuffer.cpp [ 66%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNamespaces.cpp [ 66%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.cpp [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTBinaryFunctionNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTBinaryFunctionNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTBinaryFunctionNode.cpp [ 66%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLOutputStream.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLOutputStream.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLOutputStream.cpp [ 66%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLParser.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLParser.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLParser.cpp [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbol.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbol.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCSymbol.cpp [ 66%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLToken.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLToken.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLOutputStream.cpp: In member function 'void XMLOutputStream::writeComment(const string&, const string&, bool)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLOutputStream.cpp:987:35: warning: '%02d' directive writing between 2 and 11 bytes into a region of size between 5 and 15 [-Wformat-overflow=] BUILDSTDERR: sprintf(formattedDateAndTime, "%d-%02d-%02d %02d:%02d", BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLOutputStream.cpp:987:35: note: directive argument in the range [-2147483647, 2147483647] BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /usr/include/c++/8/bits/locale_classes.h:40, BUILDSTDERR: from /usr/include/c++/8/bits/ios_base.h:41, BUILDSTDERR: from /usr/include/c++/8/ios:42, BUILDSTDERR: from /usr/include/c++/8/ostream:38, BUILDSTDERR: from /usr/include/c++/8/iostream:39, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLOutputStream.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 14 and 60 bytes into a destination of size 17 BUILDSTDERR: return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolAvogadroNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolAvogadroNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCSymbolAvogadroNode.cpp [ 66%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLTokenizer.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLTokenizer.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLTokenizer.cpp [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolDelayNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolDelayNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCSymbolDelayNode.cpp [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolRateOfNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolRateOfNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCSymbolRateOfNode.cpp [ 66%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLTriple.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/XMLTriple.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLTriple.cpp [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolTimeNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolTimeNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCSymbolTimeNode.cpp [ 66%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/LibXMLAttributes.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/LibXMLAttributes.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/LibXMLAttributes.cpp [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCiFunctionNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCiFunctionNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCiFunctionNode.cpp [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCiNumberNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCiNumberNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCiNumberNode.cpp [ 66%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/LibXMLHandler.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/LibXMLHandler.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/LibXMLHandler.cpp [ 66%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/LibXMLNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/LibXMLNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/LibXMLNamespaces.cpp [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCnBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCnBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCnBase.cpp [ 66%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/LibXMLParser.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/LibXMLParser.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/LibXMLParser.cpp [ 66%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/LibXMLTranscode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/sbml.dir/sbml/xml/LibXMLTranscode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/LibXMLTranscode.cpp [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCnExponentialNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCnExponentialNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCnExponentialNode.cpp [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCnIntegerNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCnIntegerNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCnIntegerNode.cpp [ 67%] Linking CXX shared library libsbml.so cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/sbml.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libsbml.so.5 -o libsbml.so.5.17.0 CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompExtension.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/CompBase.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Deletion.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ModelDefinition.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Port.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ReplacedBy.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ReplacedElement.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Replacing.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Submodel.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolver.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLUri.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/ClassReplacements.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniquePortIds.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp.o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcExtension.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Association.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Objective.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/util/CobraToFbcConverter.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcToCobraConverter.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcV1ToV2Converter.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp.o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp.o CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsExtension.cpp.o CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/groups/sbml/Group.cpp.o CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o CMakeFiles/sbml.dir/sbml/packages/groups/sbml/Member.cpp.o CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp.o CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp.o CMakeFiles/sbml.dir/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutExtension.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutModelPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/BoundingBox.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/CompartmentGlyph.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/CubicBezier.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Curve.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Dimensions.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Layout.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/LineSegment.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Point.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/TextGlyph.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/util/LayoutAnnotation.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/util/LayoutUtilities.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiASTPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiExtension.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiModelPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/CompartmentReference.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/IntraSpeciesReaction.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/MultiSpeciesType.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/OutwardBindingSite.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeature.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeatureType.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/MultiConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/MultiIdentifierConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/MultiMathMLConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/MultiValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiConsistencyConstraints.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiIdBase.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiIdentifierConsistencyConstraints.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckRepresentationType.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckSpeciesReference.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/MultiMathMLConsistencyConstraints.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueCRefIdsWithinCompartment.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueISTBIdsWithinMultiSpeciesType.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueMultiComponentIds.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueMultiIdBase.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSFTIdsWithinMultiSpeciesType.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSLOSFIdsWithinSpecies.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSTCIdsWithinMultiSpeciesType.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSTIIdsWithinMultiSpeciesType.cpp.o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSpeciesFeatureIdsWithinSpecies.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualExtension.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Input.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Output.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Transition.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualIdentifierConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QSAssignedOnce.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QualCSymbolMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp.o CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderExtension.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ColorDefinition.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/DefaultValues.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Ellipse.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GradientBase.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GradientStop.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Image.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/LineEnding.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/LinearGradient.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalStyle.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Polygon.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RadialGradient.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Rectangle.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RelAbsVector.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCurve.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderGroup.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderPoint.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Style.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Text.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation2D.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/util/RenderLayoutConverter.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/util/RenderUtilities.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderValidator.cpp.o CMakeFiles/sbml.dir/sbml/annotation/CVTerm.cpp.o CMakeFiles/sbml.dir/sbml/annotation/Date.cpp.o CMakeFiles/sbml.dir/sbml/annotation/ModelCreator.cpp.o CMakeFiles/sbml.dir/sbml/annotation/ModelHistory.cpp.o CMakeFiles/sbml.dir/sbml/annotation/RDFAnnotationParser.cpp.o CMakeFiles/sbml.dir/sbml/common/libsbml-version.cpp.o CMakeFiles/sbml.dir/sbml/common/operationReturnValues.cpp.o CMakeFiles/sbml.dir/sbml/conversion/ConversionOption.cpp.o CMakeFiles/sbml.dir/sbml/conversion/ConversionProperties.cpp.o CMakeFiles/sbml.dir/sbml/conversion/RegisterConverters.cpp.o CMakeFiles/sbml.dir/sbml/conversion/SBMLConverter.cpp.o CMakeFiles/sbml.dir/sbml/conversion/SBMLConverterRegistry.cpp.o CMakeFiles/sbml.dir/sbml/conversion/SBMLFunctionDefinitionConverter.cpp.o CMakeFiles/sbml.dir/sbml/conversion/SBMLIdConverter.cpp.o CMakeFiles/sbml.dir/sbml/conversion/SBMLInferUnitsConverter.cpp.o CMakeFiles/sbml.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o CMakeFiles/sbml.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o CMakeFiles/sbml.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o CMakeFiles/sbml.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o CMakeFiles/sbml.dir/sbml/conversion/SBMLRateOfConverter.cpp.o CMakeFiles/sbml.dir/sbml/conversion/SBMLReactionConverter.cpp.o CMakeFiles/sbml.dir/sbml/conversion/SBMLRuleConverter.cpp.o CMakeFiles/sbml.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o CMakeFiles/sbml.dir/sbml/conversion/SBMLUnitsConverter.cpp.o CMakeFiles/sbml.dir/sbml/extension/ASTBasePlugin.cpp.o CMakeFiles/sbml.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o CMakeFiles/sbml.dir/sbml/extension/SBMLDocumentPlugin.cpp.o CMakeFiles/sbml.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o CMakeFiles/sbml.dir/sbml/extension/SBMLExtension.cpp.o CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionException.cpp.o CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionRegistry.cpp.o CMakeFiles/sbml.dir/sbml/extension/SBaseExtensionPoint.cpp.o CMakeFiles/sbml.dir/sbml/extension/SBasePlugin.cpp.o CMakeFiles/sbml.dir/sbml/extension/SBasePluginCreatorBase.cpp.o CMakeFiles/sbml.dir/sbml/AlgebraicRule.cpp.o CMakeFiles/sbml.dir/sbml/AssignmentRule.cpp.o CMakeFiles/sbml.dir/sbml/Compartment.cpp.o CMakeFiles/sbml.dir/sbml/CompartmentType.cpp.o CMakeFiles/sbml.dir/sbml/Constraint.cpp.o CMakeFiles/sbml.dir/sbml/Delay.cpp.o CMakeFiles/sbml.dir/sbml/Event.cpp.o CMakeFiles/sbml.dir/sbml/EventAssignment.cpp.o CMakeFiles/sbml.dir/sbml/ExpectedAttributes.cpp.o CMakeFiles/sbml.dir/sbml/FunctionDefinition.cpp.o CMakeFiles/sbml.dir/sbml/InitialAssignment.cpp.o CMakeFiles/sbml.dir/sbml/KineticLaw.cpp.o CMakeFiles/sbml.dir/sbml/ListOf.cpp.o CMakeFiles/sbml.dir/sbml/LocalParameter.cpp.o CMakeFiles/sbml.dir/sbml/Model.cpp.o CMakeFiles/sbml.dir/sbml/ModifierSpeciesReference.cpp.o CMakeFiles/sbml.dir/sbml/Parameter.cpp.o CMakeFiles/sbml.dir/sbml/Priority.cpp.o CMakeFiles/sbml.dir/sbml/RateRule.cpp.o CMakeFiles/sbml.dir/sbml/Reaction.cpp.o CMakeFiles/sbml.dir/sbml/Rule.cpp.o CMakeFiles/sbml.dir/sbml/SBMLConstructorException.cpp.o CMakeFiles/sbml.dir/sbml/SBMLConvert.cpp.o CMakeFiles/sbml.dir/sbml/SBMLDocument.cpp.o CMakeFiles/sbml.dir/sbml/SBMLError.cpp.o CMakeFiles/sbml.dir/sbml/SBMLErrorLog.cpp.o CMakeFiles/sbml.dir/sbml/SBMLNamespaces.cpp.o CMakeFiles/sbml.dir/sbml/SBMLReader.cpp.o CMakeFiles/sbml.dir/sbml/SBMLTransforms.cpp.o CMakeFiles/sbml.dir/sbml/SBMLTypeCodes.cpp.o CMakeFiles/sbml.dir/sbml/SBMLVisitor.cpp.o CMakeFiles/sbml.dir/sbml/SBMLWriter.cpp.o CMakeFiles/sbml.dir/sbml/SBO.cpp.o CMakeFiles/sbml.dir/sbml/SBase.cpp.o CMakeFiles/sbml.dir/sbml/SimpleSpeciesReference.cpp.o CMakeFiles/sbml.dir/sbml/Species.cpp.o CMakeFiles/sbml.dir/sbml/SpeciesReference.cpp.o CMakeFiles/sbml.dir/sbml/SpeciesType.cpp.o CMakeFiles/sbml.dir/sbml/StoichiometryMath.cpp.o CMakeFiles/sbml.dir/sbml/SyntaxChecker.cpp.o CMakeFiles/sbml.dir/sbml/Trigger.cpp.o CMakeFiles/sbml.dir/sbml/Unit.cpp.o CMakeFiles/sbml.dir/sbml/UnitDefinition.cpp.o CMakeFiles/sbml.dir/sbml/UnitKind.c.o CMakeFiles/sbml.dir/sbml/units/FormulaUnitsData.cpp.o CMakeFiles/sbml.dir/sbml/units/UnitFormulaFormatter.cpp.o CMakeFiles/sbml.dir/sbml/units/UnitKindList.cpp.o CMakeFiles/sbml.dir/sbml/util/ElementFilter.cpp.o CMakeFiles/sbml.dir/sbml/util/IdFilter.cpp.o CMakeFiles/sbml.dir/sbml/util/IdList.cpp.o CMakeFiles/sbml.dir/sbml/util/IdentifierTransformer.cpp.o CMakeFiles/sbml.dir/sbml/util/List.cpp.o CMakeFiles/sbml.dir/sbml/util/MetaIdFilter.cpp.o CMakeFiles/sbml.dir/sbml/util/PrefixTransformer.cpp.o CMakeFiles/sbml.dir/sbml/util/util.cpp.o CMakeFiles/sbml.dir/sbml/util/Stack.c.o CMakeFiles/sbml.dir/sbml/util/StringBuffer.c.o CMakeFiles/sbml.dir/sbml/util/memory.c.o CMakeFiles/sbml.dir/sbml/validator/ConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/IdentifierConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/InternalConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/L1CompatibilityValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/L2v1CompatibilityValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/L2v2CompatibilityValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/L2v3CompatibilityValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/L2v4CompatibilityValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/L3v1CompatibilityValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/L3v2CompatibilityValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/MathMLConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/ModelingPracticeValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/OverdeterminedValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/SBMLExternalValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/SBMLInternalValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/SBMLValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/SBOConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/UnitConsistencyValidator.cpp.o CMakeFiles/sbml.dir/sbml/validator/VConstraint.cpp.o CMakeFiles/sbml.dir/sbml/validator/Validator.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/ArgumentsUnitsCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/AssignmentCycles.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/AssignmentRuleOrdering.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/CiElementMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/CiElementNot0DComp.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/CompartmentOutsideCycles.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/EqualityArgsMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/ExponentUnitsCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionApplyMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionDefinitionRecursion.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionDefinitionVars.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/FunctionReferredToExists.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/IdBase.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/KineticLawUnitsCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/KineticLawVars.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/LambdaMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/LocalParameterMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/LogicalArgsMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/MathMLBase.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/ModelUnitsDangling.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/NumberArgsMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/NumericArgsMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/NumericReturnMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/OverDeterminedCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/PieceBooleanMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/PiecewiseValueMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/PowerUnitsCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/RateOfCycles.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/ReportEmptyListOf.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/StoichiometryMathVars.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdBase.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueIdsInModel.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueMetaId.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInRules.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/UnitsBase.cpp.o CMakeFiles/sbml.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTBase.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTBinaryFunctionNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTCSymbol.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTCSymbolAvogadroNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTCSymbolDelayNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTCSymbolRateOfNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTCSymbolTimeNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTCiFunctionNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTCiNumberNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTCnBase.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTCnExponentialNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTCnIntegerNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTCnRationalNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTCnRealNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTConstantNumberNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTFunction.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTFunctionBase.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTLambdaFunctionNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTNaryFunctionNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTNumber.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTPiecewiseFunctionNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTQualifierNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTSemanticsNode.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTTypes.cpp.o CMakeFiles/sbml.dir/sbml/math/ASTUnaryFunctionNode.cpp.o CMakeFiles/sbml.dir/sbml/math/L3Parser.cpp.o CMakeFiles/sbml.dir/sbml/math/L3ParserSettings.cpp.o CMakeFiles/sbml.dir/sbml/math/MathML.cpp.o CMakeFiles/sbml.dir/sbml/math/FormulaFormatter.c.o CMakeFiles/sbml.dir/sbml/math/FormulaParser.c.o CMakeFiles/sbml.dir/sbml/math/FormulaTokenizer.c.o CMakeFiles/sbml.dir/sbml/math/L3FormulaFormatter.c.o CMakeFiles/sbml.dir/sbml/compress/CompressCommon.cpp.o CMakeFiles/sbml.dir/sbml/compress/InputDecompressor.cpp.o CMakeFiles/sbml.dir/sbml/compress/OutputCompressor.cpp.o CMakeFiles/sbml.dir/sbml/compress/bzfstream.cpp.o CMakeFiles/sbml.dir/sbml/compress/zfstream.cpp.o CMakeFiles/sbml.dir/sbml/compress/zipfstream.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLAttributes.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLBuffer.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLConstructorException.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLError.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLErrorLog.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLLogOverride.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLFileBuffer.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLHandler.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLInputStream.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLMemoryBuffer.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLNamespaces.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLNode.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLOutputStream.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLParser.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLToken.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLTokenizer.cpp.o CMakeFiles/sbml.dir/sbml/xml/XMLTriple.cpp.o CMakeFiles/sbml.dir/sbml/xml/LibXMLAttributes.cpp.o CMakeFiles/sbml.dir/sbml/xml/LibXMLHandler.cpp.o CMakeFiles/sbml.dir/sbml/xml/LibXMLNamespaces.cpp.o CMakeFiles/sbml.dir/sbml/xml/LibXMLParser.cpp.o CMakeFiles/sbml.dir/sbml/xml/LibXMLTranscode.cpp.o -lbz2 -lz -lminizip -lxml2 [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCnRationalNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCnRationalNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCnRationalNode.cpp [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTCnRealNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTCnRealNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTCnRealNode.cpp [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTConstantNumberNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTConstantNumberNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTConstantNumberNode.cpp [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTFunction.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTFunction.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTFunction.cpp [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTFunctionBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTFunctionBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTFunctionBase.cpp cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cmake -E cmake_symlink_library libsbml.so.5.17.0 libsbml.so.5 libsbml.so make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 67%] Built target sbml [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTLambdaFunctionNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTLambdaFunctionNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTLambdaFunctionNode.cpp [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTNaryFunctionNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTNaryFunctionNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTNaryFunctionNode.cpp [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTNode.cpp [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTNumber.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTNumber.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTNumber.cpp [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTPiecewiseFunctionNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTPiecewiseFunctionNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTPiecewiseFunctionNode.cpp [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTQualifierNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTQualifierNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTQualifierNode.cpp [ 68%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTSemanticsNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTSemanticsNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTSemanticsNode.cpp [ 68%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTTypes.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTTypes.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTTypes.cpp [ 68%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/ASTUnaryFunctionNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/ASTUnaryFunctionNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/ASTUnaryFunctionNode.cpp [ 68%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/L3Parser.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/L3Parser.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/L3Parser.cpp [ 68%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/L3ParserSettings.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/L3ParserSettings.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/L3ParserSettings.cpp [ 68%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/MathML.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/MathML.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/MathML.cpp [ 68%] Building C object src/CMakeFiles/sbml-static.dir/sbml/math/FormulaFormatter.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/FormulaFormatter.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/FormulaFormatter.c [ 68%] Building C object src/CMakeFiles/sbml-static.dir/sbml/math/FormulaParser.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/FormulaParser.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/FormulaParser.c [ 68%] Building C object src/CMakeFiles/sbml-static.dir/sbml/math/FormulaTokenizer.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/FormulaTokenizer.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/FormulaTokenizer.c [ 68%] Building C object src/CMakeFiles/sbml-static.dir/sbml/math/L3FormulaFormatter.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/math/L3FormulaFormatter.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/L3FormulaFormatter.c [ 68%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/compress/CompressCommon.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/compress/CompressCommon.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/CompressCommon.cpp [ 68%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/compress/InputDecompressor.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/compress/InputDecompressor.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/InputDecompressor.cpp [ 68%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/compress/OutputCompressor.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/compress/OutputCompressor.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/OutputCompressor.cpp [ 69%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/compress/bzfstream.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/compress/bzfstream.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/bzfstream.cpp [ 69%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/compress/zfstream.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/compress/zfstream.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/zfstream.cpp [ 69%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/compress/zipfstream.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/compress/zipfstream.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/compress/zipfstream.cpp [ 69%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLAttributes.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLAttributes.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLAttributes.cpp [ 69%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLBuffer.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLBuffer.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLBuffer.cpp [ 69%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLConstructorException.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLConstructorException.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLConstructorException.cpp [ 69%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLError.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLError.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLError.cpp [ 69%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLErrorLog.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLErrorLog.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLErrorLog.cpp [ 69%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLLogOverride.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLLogOverride.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLLogOverride.cpp [ 69%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLFileBuffer.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLFileBuffer.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLFileBuffer.cpp [ 69%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLHandler.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLHandler.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLHandler.cpp [ 69%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLInputStream.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLInputStream.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLInputStream.cpp [ 69%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLMemoryBuffer.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLMemoryBuffer.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLMemoryBuffer.cpp [ 70%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNamespaces.cpp [ 70%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLNode.cpp [ 70%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLOutputStream.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLOutputStream.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLOutputStream.cpp [ 70%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLParser.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLParser.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLParser.cpp [ 70%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLToken.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLToken.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLToken.cpp BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLOutputStream.cpp: In member function 'void XMLOutputStream::writeComment(const string&, const string&, bool)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLOutputStream.cpp:987:35: warning: '%02d' directive writing between 2 and 11 bytes into a region of size between 5 and 15 [-Wformat-overflow=] BUILDSTDERR: sprintf(formattedDateAndTime, "%d-%02d-%02d %02d:%02d", BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLOutputStream.cpp:987:35: note: directive argument in the range [-2147483647, 2147483647] BUILDSTDERR: In file included from /usr/include/stdio.h:861, BUILDSTDERR: from /usr/include/c++/8/cstdio:42, BUILDSTDERR: from /usr/include/c++/8/ext/string_conversions.h:43, BUILDSTDERR: from /usr/include/c++/8/bits/basic_string.h:6361, BUILDSTDERR: from /usr/include/c++/8/string:52, BUILDSTDERR: from /usr/include/c++/8/bits/locale_classes.h:40, BUILDSTDERR: from /usr/include/c++/8/bits/ios_base.h:41, BUILDSTDERR: from /usr/include/c++/8/ios:42, BUILDSTDERR: from /usr/include/c++/8/ostream:38, BUILDSTDERR: from /usr/include/c++/8/iostream:39, BUILDSTDERR: from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLOutputStream.cpp:35: BUILDSTDERR: /usr/include/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 14 and 60 bytes into a destination of size 17 BUILDSTDERR: return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: __bos (__s), __fmt, __va_arg_pack ()); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 70%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLTokenizer.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLTokenizer.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLTokenizer.cpp [ 70%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLTriple.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/XMLTriple.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/XMLTriple.cpp [ 70%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/LibXMLAttributes.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/LibXMLAttributes.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/LibXMLAttributes.cpp [ 70%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/LibXMLHandler.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/LibXMLHandler.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/LibXMLHandler.cpp [ 70%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/LibXMLNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/LibXMLNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/LibXMLNamespaces.cpp [ 70%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/LibXMLParser.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/LibXMLParser.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/LibXMLParser.cpp [ 70%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/LibXMLTranscode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/sbml-static.dir/sbml/xml/LibXMLTranscode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/LibXMLTranscode.cpp [ 71%] Linking CXX static library libsbml-static.a cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cmake -P CMakeFiles/sbml-static.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/sbml-static.dir/link.txt --verbose=1 /usr/bin/ar qc libsbml-static.a CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompExtension.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/CompBase.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Deletion.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ModelDefinition.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Port.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ReplacedBy.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ReplacedElement.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Replacing.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Submodel.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLResolver.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLUri.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/ClassReplacements.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniquePortIds.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniquePortReferences.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcExtension.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Association.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Objective.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/CobraToFbcConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcToCobraConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcV1ToV2Converter.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsExtension.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Group.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Member.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutExtension.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutModelPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/BoundingBox.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/CompartmentGlyph.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/CubicBezier.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Curve.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Dimensions.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Layout.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/LineSegment.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Point.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/TextGlyph.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/util/LayoutAnnotation.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/util/LayoutUtilities.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiASTPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiExtension.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiModelPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/CompartmentReference.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/IntraSpeciesReaction.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/MultiSpeciesType.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/OutwardBindingSite.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeature.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeatureType.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiIdentifierConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiMathMLConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiConsistencyConstraints.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiIdBase.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiIdentifierConsistencyConstraints.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckRepresentationType.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckSpeciesReference.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiMathMLConsistencyConstraints.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueCRefIdsWithinCompartment.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueISTBIdsWithinMultiSpeciesType.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueMultiComponentIds.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueMultiIdBase.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSFTIdsWithinMultiSpeciesType.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSLOSFIdsWithinSpecies.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSTCIdsWithinMultiSpeciesType.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSTIIdsWithinMultiSpeciesType.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSpeciesFeatureIdsWithinSpecies.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualExtension.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Input.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Output.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Transition.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualIdentifierConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualMathConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QSAssignedOnce.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QualCSymbolMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderExtension.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ColorDefinition.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/DefaultValues.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Ellipse.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GradientBase.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GradientStop.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Image.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LineEnding.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LinearGradient.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LocalStyle.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Polygon.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RadialGradient.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Rectangle.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RelAbsVector.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCurve.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderGroup.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderPoint.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Style.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Text.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation2D.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/util/RenderLayoutConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/util/RenderUtilities.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/annotation/CVTerm.cpp.o CMakeFiles/sbml-static.dir/sbml/annotation/Date.cpp.o CMakeFiles/sbml-static.dir/sbml/annotation/ModelCreator.cpp.o CMakeFiles/sbml-static.dir/sbml/annotation/ModelHistory.cpp.o CMakeFiles/sbml-static.dir/sbml/annotation/RDFAnnotationParser.cpp.o CMakeFiles/sbml-static.dir/sbml/common/libsbml-version.cpp.o CMakeFiles/sbml-static.dir/sbml/common/operationReturnValues.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/ConversionOption.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/ConversionProperties.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/RegisterConverters.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLConverterRegistry.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLFunctionDefinitionConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLIdConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLInferUnitsConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRateOfConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLReactionConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRuleConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLUnitsConverter.cpp.o CMakeFiles/sbml-static.dir/sbml/extension/ASTBasePlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtension.cpp.o CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionException.cpp.o CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionRegistry.cpp.o CMakeFiles/sbml-static.dir/sbml/extension/SBaseExtensionPoint.cpp.o CMakeFiles/sbml-static.dir/sbml/extension/SBasePlugin.cpp.o CMakeFiles/sbml-static.dir/sbml/extension/SBasePluginCreatorBase.cpp.o CMakeFiles/sbml-static.dir/sbml/AlgebraicRule.cpp.o CMakeFiles/sbml-static.dir/sbml/AssignmentRule.cpp.o CMakeFiles/sbml-static.dir/sbml/Compartment.cpp.o CMakeFiles/sbml-static.dir/sbml/CompartmentType.cpp.o CMakeFiles/sbml-static.dir/sbml/Constraint.cpp.o CMakeFiles/sbml-static.dir/sbml/Delay.cpp.o CMakeFiles/sbml-static.dir/sbml/Event.cpp.o CMakeFiles/sbml-static.dir/sbml/EventAssignment.cpp.o CMakeFiles/sbml-static.dir/sbml/ExpectedAttributes.cpp.o CMakeFiles/sbml-static.dir/sbml/FunctionDefinition.cpp.o CMakeFiles/sbml-static.dir/sbml/InitialAssignment.cpp.o CMakeFiles/sbml-static.dir/sbml/KineticLaw.cpp.o CMakeFiles/sbml-static.dir/sbml/ListOf.cpp.o CMakeFiles/sbml-static.dir/sbml/LocalParameter.cpp.o CMakeFiles/sbml-static.dir/sbml/Model.cpp.o CMakeFiles/sbml-static.dir/sbml/ModifierSpeciesReference.cpp.o CMakeFiles/sbml-static.dir/sbml/Parameter.cpp.o CMakeFiles/sbml-static.dir/sbml/Priority.cpp.o CMakeFiles/sbml-static.dir/sbml/RateRule.cpp.o CMakeFiles/sbml-static.dir/sbml/Reaction.cpp.o CMakeFiles/sbml-static.dir/sbml/Rule.cpp.o CMakeFiles/sbml-static.dir/sbml/SBMLConstructorException.cpp.o CMakeFiles/sbml-static.dir/sbml/SBMLConvert.cpp.o CMakeFiles/sbml-static.dir/sbml/SBMLDocument.cpp.o CMakeFiles/sbml-static.dir/sbml/SBMLError.cpp.o CMakeFiles/sbml-static.dir/sbml/SBMLErrorLog.cpp.o CMakeFiles/sbml-static.dir/sbml/SBMLNamespaces.cpp.o CMakeFiles/sbml-static.dir/sbml/SBMLReader.cpp.o CMakeFiles/sbml-static.dir/sbml/SBMLTransforms.cpp.o CMakeFiles/sbml-static.dir/sbml/SBMLTypeCodes.cpp.o CMakeFiles/sbml-static.dir/sbml/SBMLVisitor.cpp.o CMakeFiles/sbml-static.dir/sbml/SBMLWriter.cpp.o CMakeFiles/sbml-static.dir/sbml/SBO.cpp.o CMakeFiles/sbml-static.dir/sbml/SBase.cpp.o CMakeFiles/sbml-static.dir/sbml/SimpleSpeciesReference.cpp.o CMakeFiles/sbml-static.dir/sbml/Species.cpp.o CMakeFiles/sbml-static.dir/sbml/SpeciesReference.cpp.o CMakeFiles/sbml-static.dir/sbml/SpeciesType.cpp.o CMakeFiles/sbml-static.dir/sbml/StoichiometryMath.cpp.o CMakeFiles/sbml-static.dir/sbml/SyntaxChecker.cpp.o CMakeFiles/sbml-static.dir/sbml/Trigger.cpp.o CMakeFiles/sbml-static.dir/sbml/Unit.cpp.o CMakeFiles/sbml-static.dir/sbml/UnitDefinition.cpp.o CMakeFiles/sbml-static.dir/sbml/UnitKind.c.o CMakeFiles/sbml-static.dir/sbml/units/FormulaUnitsData.cpp.o CMakeFiles/sbml-static.dir/sbml/units/UnitFormulaFormatter.cpp.o CMakeFiles/sbml-static.dir/sbml/units/UnitKindList.cpp.o CMakeFiles/sbml-static.dir/sbml/util/ElementFilter.cpp.o CMakeFiles/sbml-static.dir/sbml/util/IdFilter.cpp.o CMakeFiles/sbml-static.dir/sbml/util/IdList.cpp.o CMakeFiles/sbml-static.dir/sbml/util/IdentifierTransformer.cpp.o CMakeFiles/sbml-static.dir/sbml/util/List.cpp.o CMakeFiles/sbml-static.dir/sbml/util/MetaIdFilter.cpp.o CMakeFiles/sbml-static.dir/sbml/util/PrefixTransformer.cpp.o CMakeFiles/sbml-static.dir/sbml/util/util.cpp.o CMakeFiles/sbml-static.dir/sbml/util/Stack.c.o CMakeFiles/sbml-static.dir/sbml/util/StringBuffer.c.o CMakeFiles/sbml-static.dir/sbml/util/memory.c.o CMakeFiles/sbml-static.dir/sbml/validator/ConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/IdentifierConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/InternalConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/L1CompatibilityValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/L2v1CompatibilityValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/L2v2CompatibilityValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/L2v3CompatibilityValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/L2v4CompatibilityValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/L3v1CompatibilityValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/L3v2CompatibilityValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/MathMLConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/ModelingPracticeValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/OverdeterminedValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/SBMLExternalValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/SBMLInternalValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/SBMLValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/SBOConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/StrictUnitConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/UnitConsistencyValidator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/VConstraint.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/Validator.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ArgumentsUnitsCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ArgumentsUnitsCheckWarnings.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/AssignmentCycles.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/AssignmentRuleOrdering.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/CiElementMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/CiElementNot0DComp.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/CompartmentOutsideCycles.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/DuplicateTopLevelAnnotation.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/EqualityArgsMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ExponentUnitsCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionApplyMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionDefinitionRecursion.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionDefinitionVars.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionNoArgsMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/FunctionReferredToExists.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdBase.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawUnitsCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawVars.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/LambdaMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/LocalParameterMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/LocalParameterShadowsIdInModel.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/LogicalArgsMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/MathMLBase.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ModelUnitsDangling.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumberArgsMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumericArgsMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumericReturnMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/OverDeterminedCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/PieceBooleanMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/PiecewiseValueMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/PowerUnitsCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfAssignmentMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCiTargetMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCompartmentMathCheck.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/RateOfCycles.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ReportEmptyListOf.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/StoichiometryMathVars.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdBase.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsInKineticLaw.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsInModel.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueMetaId.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueSpeciesTypesInCompartment.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueSymbolsInInitialAssignments.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInEventAssignments.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInEventsAndRules.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInInitialAssignmentsAndRules.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueVarsInRules.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/UnitsBase.cpp.o CMakeFiles/sbml-static.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTBase.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTBinaryFunctionNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbol.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolAvogadroNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolDelayNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolRateOfNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTCSymbolTimeNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTCiFunctionNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTCiNumberNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTCnBase.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTCnExponentialNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTCnIntegerNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTCnRationalNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTCnRealNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTConstantNumberNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTFunction.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTFunctionBase.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTLambdaFunctionNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTNaryFunctionNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTNumber.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTPiecewiseFunctionNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTQualifierNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTSemanticsNode.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTTypes.cpp.o CMakeFiles/sbml-static.dir/sbml/math/ASTUnaryFunctionNode.cpp.o /usr/bin/ar q libsbml-static.a CMakeFiles/sbml-static.dir/sbml/math/L3Parser.cpp.o CMakeFiles/sbml-static.dir/sbml/math/L3ParserSettings.cpp.o CMakeFiles/sbml-static.dir/sbml/math/MathML.cpp.o CMakeFiles/sbml-static.dir/sbml/math/FormulaFormatter.c.o CMakeFiles/sbml-static.dir/sbml/math/FormulaParser.c.o CMakeFiles/sbml-static.dir/sbml/math/FormulaTokenizer.c.o CMakeFiles/sbml-static.dir/sbml/math/L3FormulaFormatter.c.o CMakeFiles/sbml-static.dir/sbml/compress/CompressCommon.cpp.o CMakeFiles/sbml-static.dir/sbml/compress/InputDecompressor.cpp.o CMakeFiles/sbml-static.dir/sbml/compress/OutputCompressor.cpp.o CMakeFiles/sbml-static.dir/sbml/compress/bzfstream.cpp.o CMakeFiles/sbml-static.dir/sbml/compress/zfstream.cpp.o CMakeFiles/sbml-static.dir/sbml/compress/zipfstream.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLAttributes.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLBuffer.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLConstructorException.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLError.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLErrorLog.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLLogOverride.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLFileBuffer.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLHandler.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLInputStream.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLMemoryBuffer.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLNamespaces.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLNode.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLOutputStream.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLParser.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLToken.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLTokenizer.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/XMLTriple.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/LibXMLAttributes.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/LibXMLHandler.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/LibXMLNamespaces.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/LibXMLParser.cpp.o CMakeFiles/sbml-static.dir/sbml/xml/LibXMLTranscode.cpp.o /usr/bin/ranlib libsbml-static.a make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 71%] Built target sbml-static make -f src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/build.make src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/depend make -f src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/build.make src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/depend make -f src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/build.make src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/depend make -f src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/build.make src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/DependInfo.cmake --color= make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/DependInfo.cmake --color= make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/util/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/DependInfo.cmake --color= make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/DependInfo.cmake --color= Scanning dependencies of target test_comp_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/build.make src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' Scanning dependencies of target test_comp_extensions make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/build.make src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/build [ 71%] Building CXX object src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/TestCompConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_validator.dir/TestCompConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/test/TestCompConsistencyValidator.cpp make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 71%] Building CXX object src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/TestCheckConsistency.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_extensions.dir/TestCheckConsistency.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/test/TestCheckConsistency.cpp Scanning dependencies of target test_comp_util make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/build.make src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/build Scanning dependencies of target test_comp_sbase make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/build.make src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 71%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_util.dir/TestCompFlatteningConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test/TestCompFlatteningConverter.cpp [ 71%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestReadWriteSBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestReadWriteSBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestReadWriteSBase.cpp [ 71%] Building CXX object src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/test/TestFile.cpp [ 71%] Building CXX object src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/TestExtensionObjects.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_extensions.dir/TestExtensionObjects.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/test/TestExtensionObjects.cpp [ 71%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestSBaseObjects.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestSBaseObjects.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestSBaseObjects.cpp [ 71%] Building CXX object src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/test/TestValidator.cpp [ 71%] Linking CXX executable test_comp_validator cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_comp_validator.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_comp_validator.dir/TestCompConsistencyValidator.cpp.o CMakeFiles/test_comp_validator.dir/TestFile.cpp.o CMakeFiles/test_comp_validator.dir/TestValidator.cpp.o -o test_comp_validator ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 71%] Building CXX object src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/TestMultipleNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_extensions.dir/TestMultipleNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/test/TestMultipleNamespaces.cpp [ 71%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestDeletion.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestDeletion.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestDeletion.c [ 71%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningConverterStripPackage.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_util.dir/TestCompFlatteningConverterStripPackage.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test/TestCompFlatteningConverterStripPackage.cpp [ 71%] Building CXX object src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_extensions.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension/test/TestRunner.c [ 71%] Linking CXX executable test_comp_extensions cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_comp_extensions.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_comp_extensions.dir/TestCheckConsistency.cpp.o CMakeFiles/test_comp_extensions.dir/TestExtensionObjects.cpp.o CMakeFiles/test_comp_extensions.dir/TestMultipleNamespaces.cpp.o CMakeFiles/test_comp_extensions.dir/TestRunner.c.o -o test_comp_extensions ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 71%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestExternalModelDefinition.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestExternalModelDefinition.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 71%] Built target test_comp_validator make -f src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/build.make src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/DependInfo.cmake --color= Scanning dependencies of target test_sbml_package_fbc make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/build.make src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 71%] Building CXX object src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestFbcAssociation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_fbc.dir/TestFbcAssociation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/test/TestFbcAssociation.cpp [ 71%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningErrorMessages.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_util.dir/TestCompFlatteningErrorMessages.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test/TestCompFlatteningErrorMessages.cpp [ 71%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestModelDefinition.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestModelDefinition.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestModelDefinition.c [ 71%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestPort.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestPort.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestPort.c [ 71%] Building CXX object src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestFbcExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_fbc.dir/TestFbcExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/test/TestFbcExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 71%] Built target test_comp_extensions [ 71%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestReplacedBy.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestReplacedBy.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestReplacedBy.c [ 72%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestReplacedElement.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestReplacedElement.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestReplacedElement.c [ 72%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningNewFlags.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_util.dir/TestCompFlatteningNewFlags.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test/TestCompFlatteningNewFlags.cpp [ 72%] Building CXX object src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestReadFbcExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_fbc.dir/TestReadFbcExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/test/TestReadFbcExtension.cpp [ 72%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestRunner.c [ 72%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestSBaseRef.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestSBaseRef.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestSBaseRef.c [ 72%] Building CXX object src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestWriteFbcExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_fbc.dir/TestWriteFbcExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/test/TestWriteFbcExtension.cpp [ 72%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestSubmodel.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_sbase.dir/TestSubmodel.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml/test/TestSubmodel.c [ 72%] Building CXX object src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_fbc.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension/test/TestRunner.c make -f src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/build.make src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/DependInfo.cmake --color= Scanning dependencies of target test_fbc_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/build.make src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 72%] Building CXX object src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/TestFbcConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_fbc_validator.dir/TestFbcConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/test/TestFbcConsistencyValidator.cpp [ 72%] Linking CXX executable test_comp_sbase cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_comp_sbase.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_comp_sbase.dir/TestReadWriteSBase.cpp.o CMakeFiles/test_comp_sbase.dir/TestSBaseObjects.cpp.o CMakeFiles/test_comp_sbase.dir/TestDeletion.c.o CMakeFiles/test_comp_sbase.dir/TestExternalModelDefinition.c.o CMakeFiles/test_comp_sbase.dir/TestModelDefinition.c.o CMakeFiles/test_comp_sbase.dir/TestPort.c.o CMakeFiles/test_comp_sbase.dir/TestReplacedBy.c.o CMakeFiles/test_comp_sbase.dir/TestReplacedElement.c.o CMakeFiles/test_comp_sbase.dir/TestRunner.c.o CMakeFiles/test_comp_sbase.dir/TestSBaseRef.c.o CMakeFiles/test_comp_sbase.dir/TestSubmodel.c.o -o test_comp_sbase ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 72%] Building CXX object src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_fbc_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/test/TestFile.cpp [ 72%] Linking CXX executable test_sbml_package_fbc cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_package_fbc.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_sbml_package_fbc.dir/TestFbcAssociation.cpp.o CMakeFiles/test_sbml_package_fbc.dir/TestFbcExtension.cpp.o CMakeFiles/test_sbml_package_fbc.dir/TestReadFbcExtension.cpp.o CMakeFiles/test_sbml_package_fbc.dir/TestWriteFbcExtension.cpp.o CMakeFiles/test_sbml_package_fbc.dir/TestRunner.c.o -o test_sbml_package_fbc ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 72%] Building CXX object src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_fbc_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/test/TestValidator.cpp [ 72%] Linking CXX executable test_fbc_validator cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/fbc/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_fbc_validator.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_fbc_validator.dir/TestFbcConsistencyValidator.cpp.o CMakeFiles/test_fbc_validator.dir/TestFile.cpp.o CMakeFiles/test_fbc_validator.dir/TestValidator.cpp.o -o test_fbc_validator ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 72%] Built target test_comp_sbase make -f src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/build.make src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/DependInfo.cmake --color= Scanning dependencies of target test_extension_package_groups make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/build.make src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 72%] Building CXX object src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestGroupsExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_extension_package_groups.dir/TestGroupsExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/test/TestGroupsExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 72%] Built target test_sbml_package_fbc [ 72%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningUnknownPackageRefs.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_util.dir/TestCompFlatteningUnknownPackageRefs.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test/TestCompFlatteningUnknownPackageRefs.cpp [ 72%] Building CXX object src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestGroupsModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_extension_package_groups.dir/TestGroupsModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/test/TestGroupsModelPlugin.cpp [ 72%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompLevelVersionConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_util.dir/TestCompLevelVersionConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test/TestCompLevelVersionConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 72%] Built target test_fbc_validator make -f src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/build.make src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/depend [ 72%] Building CXX object src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestReadGroupsExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_extension_package_groups.dir/TestReadGroupsExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/test/TestReadGroupsExtension.cpp make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/DependInfo.cmake --color= Scanning dependencies of target test_groups_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/build.make src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 72%] Building CXX object src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_groups_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/test/TestFile.cpp [ 72%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestExternalModelResolving.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_util.dir/TestExternalModelResolving.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test/TestExternalModelResolving.cpp [ 73%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestURIResolvers.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_util.dir/TestURIResolvers.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test/TestURIResolvers.cpp [ 73%] Building CXX object src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/TestGroupsConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_groups_validator.dir/TestGroupsConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/test/TestGroupsConsistencyValidator.cpp [ 73%] Building CXX object src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestWriteGroupsExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_extension_package_groups.dir/TestWriteGroupsExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/test/TestWriteGroupsExtension.cpp [ 73%] Building CXX object src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_extension_package_groups.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension/test/TestRunner.c [ 73%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/util/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_comp_util.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util/test/TestRunner.c [ 74%] Building CXX object src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_groups_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/test/TestValidator.cpp make -f src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/build.make src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/DependInfo.cmake --color= [ 74%] Linking CXX executable test_comp_util cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/comp/util/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_comp_util.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_comp_util.dir/TestCompFlatteningConverter.cpp.o CMakeFiles/test_comp_util.dir/TestCompFlatteningConverterStripPackage.cpp.o CMakeFiles/test_comp_util.dir/TestCompFlatteningErrorMessages.cpp.o CMakeFiles/test_comp_util.dir/TestCompFlatteningNewFlags.cpp.o CMakeFiles/test_comp_util.dir/TestCompFlatteningUnknownPackageRefs.cpp.o CMakeFiles/test_comp_util.dir/TestCompLevelVersionConverter.cpp.o CMakeFiles/test_comp_util.dir/TestExternalModelResolving.cpp.o CMakeFiles/test_comp_util.dir/TestURIResolvers.cpp.o CMakeFiles/test_comp_util.dir/TestRunner.c.o -o test_comp_util ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 Scanning dependencies of target test_sbml_package_layout make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/build.make src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 74%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestBoundingBox.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestBoundingBox.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestBoundingBox.cpp [ 74%] Linking CXX executable test_extension_package_groups cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_extension_package_groups.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_extension_package_groups.dir/TestGroupsExtension.cpp.o CMakeFiles/test_extension_package_groups.dir/TestGroupsModelPlugin.cpp.o CMakeFiles/test_extension_package_groups.dir/TestReadGroupsExtension.cpp.o CMakeFiles/test_extension_package_groups.dir/TestWriteGroupsExtension.cpp.o CMakeFiles/test_extension_package_groups.dir/TestRunner.c.o -o test_extension_package_groups ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 74%] Linking CXX executable test_groups_validator cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/groups/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_groups_validator.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_groups_validator.dir/TestFile.cpp.o CMakeFiles/test_groups_validator.dir/TestGroupsConsistencyValidator.cpp.o CMakeFiles/test_groups_validator.dir/TestValidator.cpp.o -o test_groups_validator ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 75%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestCompartmentGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestCompartmentGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestCompartmentGlyph.cpp [ 75%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestCubicBezier.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestCubicBezier.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestCubicBezier.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 75%] Built target test_comp_util make -f src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/build.make src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/DependInfo.cmake --color= Scanning dependencies of target test_layout_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/build.make src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 75%] Building CXX object src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_layout_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/test/TestFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 75%] Built target test_extension_package_groups [ 75%] Building CXX object src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/TestLayoutConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_layout_validator.dir/TestLayoutConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/test/TestLayoutConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 75%] Built target test_groups_validator [ 75%] Building CXX object src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_layout_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/validator/test/TestValidator.cpp [ 75%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestCurve.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestCurve.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestCurve.cpp make -f src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/build.make src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/DependInfo.cmake --color= Scanning dependencies of target test_sbml_package_multi make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/build.make src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 75%] Building CXX object src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/TestCheckConsistency.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_multi.dir/TestCheckConsistency.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/test/TestCheckConsistency.cpp make -f src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/build.make src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/DependInfo.cmake --color= Scanning dependencies of target test_multi_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/build.make src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 75%] Building CXX object src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_multi_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/test/TestFile.cpp [ 75%] Building CXX object src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/TestMultiConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_multi_validator.dir/TestMultiConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/test/TestMultiConsistencyValidator.cpp [ 75%] Linking CXX executable test_layout_validator cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_layout_validator.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_layout_validator.dir/TestFile.cpp.o CMakeFiles/test_layout_validator.dir/TestLayoutConsistencyValidator.cpp.o CMakeFiles/test_layout_validator.dir/TestValidator.cpp.o -o test_layout_validator ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 75%] Building CXX object src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/TestMultiAST.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_multi.dir/TestMultiAST.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/test/TestMultiAST.cpp [ 75%] Building CXX object src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_multi_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/test/TestValidator.cpp [ 75%] Building CXX object src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/TestMultiExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_multi.dir/TestMultiExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/test/TestMultiExtension.cpp [ 75%] Linking CXX executable test_multi_validator cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_multi_validator.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_multi_validator.dir/TestFile.cpp.o CMakeFiles/test_multi_validator.dir/TestMultiConsistencyValidator.cpp.o CMakeFiles/test_multi_validator.dir/TestValidator.cpp.o -o test_multi_validator ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 75%] Built target test_layout_validator make -f src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/build.make src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/DependInfo.cmake --color= Scanning dependencies of target test_extension_package_qual make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/build.make src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 76%] Building CXX object src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestGetAllElements.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_extension_package_qual.dir/TestGetAllElements.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/test/TestGetAllElements.cpp [ 76%] Building CXX object src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_multi.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension/test/TestRunner.c [ 77%] Linking CXX executable test_sbml_package_multi cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/multi/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_package_multi.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_sbml_package_multi.dir/TestCheckConsistency.cpp.o CMakeFiles/test_sbml_package_multi.dir/TestMultiAST.cpp.o CMakeFiles/test_sbml_package_multi.dir/TestMultiExtension.cpp.o CMakeFiles/test_sbml_package_multi.dir/TestRunner.c.o -o test_sbml_package_multi ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 77%] Building CXX object src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestQualExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_extension_package_qual.dir/TestQualExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/test/TestQualExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 77%] Built target test_multi_validator [ 77%] Building CXX object src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestReadQualExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_extension_package_qual.dir/TestReadQualExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/test/TestReadQualExtension.cpp [ 77%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestDimensions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestDimensions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestDimensions.cpp make -f src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/build.make src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/DependInfo.cmake --color= Scanning dependencies of target test_sbml_package_qual make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/build.make src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 77%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestCopyAndClone.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_qual.dir/TestCopyAndClone.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test/TestCopyAndClone.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 77%] Built target test_sbml_package_multi [ 77%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestGeneralGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestGeneralGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestGeneralGlyph.cpp [ 77%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestGraphicalObject.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestGraphicalObject.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestGraphicalObject.cpp [ 77%] Building CXX object src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestWriteQualExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_extension_package_qual.dir/TestWriteQualExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/test/TestWriteQualExtension.cpp [ 77%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestDefaultTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_qual.dir/TestDefaultTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test/TestDefaultTerm.cpp [ 77%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestFunctionTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_qual.dir/TestFunctionTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test/TestFunctionTerm.cpp [ 77%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLayout.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestLayout.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestLayout.cpp make -f src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/build.make src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/DependInfo.cmake --color= [ 77%] Building CXX object src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_extension_package_qual.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension/test/TestRunner.c Scanning dependencies of target test_qual_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/build.make src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 77%] Building CXX object src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_qual_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/test/TestFile.cpp [ 77%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestInput.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_qual.dir/TestInput.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test/TestInput.cpp [ 77%] Linking CXX executable test_extension_package_qual cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_extension_package_qual.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_extension_package_qual.dir/TestGetAllElements.cpp.o CMakeFiles/test_extension_package_qual.dir/TestQualExtension.cpp.o CMakeFiles/test_extension_package_qual.dir/TestReadQualExtension.cpp.o CMakeFiles/test_extension_package_qual.dir/TestWriteQualExtension.cpp.o CMakeFiles/test_extension_package_qual.dir/TestRunner.c.o -o test_extension_package_qual ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 77%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLayoutCreation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestLayoutCreation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestLayoutCreation.cpp [ 77%] Building CXX object src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/TestQualConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_qual_validator.dir/TestQualConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/test/TestQualConsistencyValidator.cpp [ 77%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestListOfFunctionTerms.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_qual.dir/TestListOfFunctionTerms.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test/TestListOfFunctionTerms.cpp [ 77%] Building CXX object src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_qual_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/test/TestValidator.cpp [ 77%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestOutput.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_qual.dir/TestOutput.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test/TestOutput.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 77%] Built target test_extension_package_qual [ 77%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestQualitativeSpecies.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_qual.dir/TestQualitativeSpecies.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test/TestQualitativeSpecies.cpp [ 78%] Linking CXX executable test_qual_validator cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_qual_validator.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_qual_validator.dir/TestFile.cpp.o CMakeFiles/test_qual_validator.dir/TestQualConsistencyValidator.cpp.o CMakeFiles/test_qual_validator.dir/TestValidator.cpp.o -o test_qual_validator ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 78%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLayoutFormatter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestLayoutFormatter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestLayoutFormatter.cpp [ 78%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestTransition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_qual.dir/TestTransition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test/TestTransition.cpp [ 78%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLayoutWriting.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestLayoutWriting.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestLayoutWriting.cpp [ 78%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_qual.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 78%] Built target test_qual_validator make -f src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/build.make src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/DependInfo.cmake --color= [ 78%] Linking CXX executable test_sbml_package_qual cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/qual/sbml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_package_qual.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_sbml_package_qual.dir/TestCopyAndClone.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestDefaultTerm.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestFunctionTerm.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestInput.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestListOfFunctionTerms.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestOutput.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestQualitativeSpecies.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestTransition.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestRunner.c.o -o test_sbml_package_qual ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 Scanning dependencies of target test_sbml_package_render make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/build.make src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 78%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestColorDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestColorDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestColorDefinition.cpp [ 78%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestEllipse.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestEllipse.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestEllipse.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 78%] Built target test_sbml_package_qual [ 78%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLineSegment.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestLineSegment.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestLineSegment.cpp [ 79%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGlobalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestGlobalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestGlobalRenderInformation.cpp make -f src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/build.make src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/DependInfo.cmake --color= Scanning dependencies of target test_render_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/build.make src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 79%] Building CXX object src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_render_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/test/TestFile.cpp [ 79%] Building CXX object src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/TestRenderConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_render_validator.dir/TestRenderConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/test/TestRenderConsistencyValidator.cpp [ 79%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestPoint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestPoint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestPoint.cpp [ 79%] Building CXX object src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_render_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/test/TestValidator.cpp [ 79%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGlobalStyle.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestGlobalStyle.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestGlobalStyle.cpp [ 79%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestReactionGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestReactionGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestReactionGlyph.cpp [ 79%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGradientBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestGradientBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestGradientBase.cpp [ 79%] Linking CXX executable test_render_validator cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_render_validator.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_render_validator.dir/TestFile.cpp.o CMakeFiles/test_render_validator.dir/TestRenderConsistencyValidator.cpp.o CMakeFiles/test_render_validator.dir/TestValidator.cpp.o -o test_render_validator ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 80%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestReferenceGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestReferenceGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestReferenceGlyph.cpp [ 80%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestSBMLHandler.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestSBMLHandler.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestSBMLHandler.cpp [ 80%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGradientStop.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestGradientStop.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestGradientStop.cpp [ 80%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestSpeciesGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestSpeciesGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestSpeciesGlyph.cpp [ 80%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive1D.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive1D.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestGraphicalPrimitive1D.cpp [ 80%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestSpeciesReferenceGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestSpeciesReferenceGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestSpeciesReferenceGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 80%] Built target test_render_validator make -f src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/build.make src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/depend make -f src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/build.make src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/DependInfo.cmake --color= make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/DependInfo.cmake --color= Scanning dependencies of target test_sbml_conversion make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/build.make src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 80%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestConversionOption.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestConversionOption.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestConversionOption.cpp Scanning dependencies of target test_sbml_annotation make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/build.make src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 80%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestCopyAndClone.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestCopyAndClone.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestCopyAndClone.cpp [ 80%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestTextGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestTextGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestTextGlyph.cpp [ 80%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive2D.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive2D.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestGraphicalPrimitive2D.cpp [ 80%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestL3ModelHistory.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestL3ModelHistory.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestL3ModelHistory.cpp [ 80%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestConversionProperties.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestConversionProperties.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestConversionProperties.cpp [ 80%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/utility.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/utility.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/utility.cpp [ 80%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGroup.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestGroup.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestGroup.cpp [ 80%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_layout.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/layout/sbml/test/TestRunner.c [ 80%] Linking CXX executable test_sbml_package_layout cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_package_layout.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_sbml_package_layout.dir/TestBoundingBox.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestCompartmentGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestCubicBezier.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestCurve.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestDimensions.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestGeneralGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestGraphicalObject.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestLayout.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestLayoutCreation.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestLayoutFormatter.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestLayoutWriting.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestLineSegment.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestPoint.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestReactionGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestReferenceGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestSBMLHandler.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestSpeciesGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestSpeciesReferenceGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestTextGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/utility.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestRunner.c.o -o test_sbml_package_layout ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 81%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestInferUnitsConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestInferUnitsConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestInferUnitsConverter.cpp [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestRDFAnnotation.cpp [ 81%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestImage.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestImage.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestImage.cpp [ 81%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestLevelVersionConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestLevelVersionConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestLevelVersionConverter.cpp [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation2.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation2.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestRDFAnnotation2.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 81%] Built target test_sbml_package_layout make -f src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/build.make src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/DependInfo.cmake --color= [ 81%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestLineEnding.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestLineEnding.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestLineEnding.cpp Scanning dependencies of target test_sbml_extension make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/build.make src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 81%] Building C object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestRunner.c [ 82%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestPackage.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestPackage.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestPackage.cpp [ 82%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestRateOfConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestRateOfConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestRateOfConverter.cpp [ 82%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationMetaid.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationMetaid.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestRDFAnnotationMetaid.cpp [ 82%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestLinearGradient.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestLinearGradient.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestLinearGradient.cpp [ 82%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestSBMLDocumentPlugin.cpp [ 82%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestSBMLConverterRegistry.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestSBMLConverterRegistry.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestSBMLConverterRegistry.cpp [ 82%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationNestedCVTerms.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationNestedCVTerms.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestRDFAnnotationNestedCVTerms.cpp [ 82%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBMLExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestSBMLExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestSBMLExtension.cpp [ 82%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestSBMLRuleConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestSBMLRuleConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestSBMLRuleConverter.cpp [ 82%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestLocalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestLocalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestLocalRenderInformation.cpp [ 82%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationVCard4.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationVCard4.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestRDFAnnotationVCard4.cpp [ 82%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestStripPackageConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestStripPackageConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestStripPackageConverter.cpp [ 82%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestSBMLExtensionNamespaces.cpp [ 83%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestSyncAnnotation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestSyncAnnotation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestSyncAnnotation.cpp [ 83%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestLocalStyle.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestLocalStyle.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestLocalStyle.cpp [ 83%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionRegistry.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionRegistry.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestSBMLExtensionRegistry.cpp [ 83%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestUnitsConverter.cpp [ 83%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestValidation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestValidation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestValidation.cpp [ 84%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestPolygon.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestPolygon.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestPolygon.cpp [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBaseExtensionPoint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestSBaseExtensionPoint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestSBaseExtensionPoint.cpp [ 84%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestCVTerms.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestCVTerms.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestCVTerms.c [ 84%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestCVTerms_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestCVTerms_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestCVTerms_newSetters.c [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBasePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestSBasePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestSBasePlugin.cpp [ 84%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter2.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter2.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestUnitsConverter2.cpp [ 84%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRadialGradient.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestRadialGradient.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRadialGradient.cpp [ 84%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestDate_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestDate_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestDate_newSetters.c [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestSBasePluginCreator.cpp [ 84%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestModelCreator_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestModelCreator_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestModelCreator_newSetters.c [ 84%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRectangle.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestRectangle.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRectangle.cpp [ 84%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestModelHistory.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestModelHistory.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestModelHistory.c [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreatorBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreatorBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestSBasePluginCreatorBase.cpp [ 84%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestUnitsConverterL2.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestUnitsConverterL2.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestUnitsConverterL2.cpp [ 84%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestModelHistory_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestModelHistory_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestModelHistory_newSetters.c [ 84%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRelAbsVector.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestRelAbsVector.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRelAbsVector.cpp [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestUnknownPackage.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_extension.dir/TestUnknownPackage.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/extension/test/TestUnknownPackage.cpp [ 84%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationC.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationC.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestRDFAnnotationC.c [ 84%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_conversion.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/conversion/test/TestRunner.c [ 84%] Linking CXX executable test_sbml_conversion cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/conversion/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_conversion.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_sbml_conversion.dir/TestConversionOption.cpp.o CMakeFiles/test_sbml_conversion.dir/TestConversionProperties.cpp.o CMakeFiles/test_sbml_conversion.dir/TestInferUnitsConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestLevelVersionConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestRateOfConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestSBMLConverterRegistry.cpp.o CMakeFiles/test_sbml_conversion.dir/TestSBMLRuleConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestStripPackageConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter2.cpp.o CMakeFiles/test_sbml_conversion.dir/TestUnitsConverterL2.cpp.o CMakeFiles/test_sbml_conversion.dir/TestRunner.c.o -o test_sbml_conversion ../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 84%] Linking CXX executable test_sbml_extension cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_extension.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_sbml_extension.dir/TestRunner.c.o CMakeFiles/test_sbml_extension.dir/TestPackage.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBMLDocumentPlugin.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBMLExtension.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionNamespaces.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionRegistry.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBaseExtensionPoint.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBasePlugin.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreator.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreatorBase.cpp.o CMakeFiles/test_sbml_extension.dir/TestUnknownPackage.cpp.o -o test_sbml_extension ../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 84%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_annotation.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/annotation/test/TestRunner.c [ 84%] Linking CXX executable test_sbml_annotation cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/annotation/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_annotation.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_sbml_annotation.dir/TestCopyAndClone.cpp.o CMakeFiles/test_sbml_annotation.dir/TestL3ModelHistory.cpp.o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation.cpp.o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation2.cpp.o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationMetaid.cpp.o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationNestedCVTerms.cpp.o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationVCard4.cpp.o CMakeFiles/test_sbml_annotation.dir/TestSyncAnnotation.cpp.o CMakeFiles/test_sbml_annotation.dir/TestValidation.cpp.o CMakeFiles/test_sbml_annotation.dir/TestCVTerms.c.o CMakeFiles/test_sbml_annotation.dir/TestCVTerms_newSetters.c.o CMakeFiles/test_sbml_annotation.dir/TestDate_newSetters.c.o CMakeFiles/test_sbml_annotation.dir/TestModelCreator_newSetters.c.o CMakeFiles/test_sbml_annotation.dir/TestModelHistory.c.o CMakeFiles/test_sbml_annotation.dir/TestModelHistory_newSetters.c.o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationC.c.o CMakeFiles/test_sbml_annotation.dir/TestRunner.c.o -o test_sbml_annotation ../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 84%] Built target test_sbml_conversion make -f src/sbml/math/test/CMakeFiles/test_sbml_math.dir/build.make src/sbml/math/test/CMakeFiles/test_sbml_math.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test/CMakeFiles/test_sbml_math.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 84%] Built target test_sbml_extension make -f src/sbml/test/CMakeFiles/test_sbml_sbml.dir/build.make src/sbml/test/CMakeFiles/test_sbml_sbml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test/CMakeFiles/test_sbml_sbml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' Scanning dependencies of target test_sbml_math make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/sbml/math/test/CMakeFiles/test_sbml_math.dir/build.make src/sbml/math/test/CMakeFiles/test_sbml_math.dir/build [ 84%] Built target test_sbml_annotation make -f src/sbml/units/test/CMakeFiles/test_sbml_units.dir/build.make src/sbml/units/test/CMakeFiles/test_sbml_units.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test/CMakeFiles/test_sbml_units.dir/DependInfo.cmake --color= [ 84%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestChildFunctions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestChildFunctions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestChildFunctions.cpp Scanning dependencies of target test_sbml_units make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/sbml/units/test/CMakeFiles/test_sbml_units.dir/build.make src/sbml/units/test/CMakeFiles/test_sbml_units.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 84%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestCalculatedUnitDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestCalculatedUnitDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestCalculatedUnitDefinitions.cpp [ 84%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderCubicBezier.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestRenderCubicBezier.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderCubicBezier.cpp [ 84%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestGetValue.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestGetValue.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestGetValue.cpp Scanning dependencies of target test_sbml_sbml make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/sbml/test/CMakeFiles/test_sbml_sbml.dir/build.make src/sbml/test/CMakeFiles/test_sbml_sbml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 84%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestAncestor.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestAncestor.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestAncestor.cpp [ 84%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestDerivedUnitDefinitions.cpp [ 84%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderCurve.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestRenderCurve.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderCurve.cpp [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestL3FormulaParser.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestL3FormulaParser.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestL3FormulaParser.cpp [ 85%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions_undefined.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions_undefined.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestDerivedUnitDefinitions_undefined.cpp [ 85%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestAttributeFunctions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestAttributeFunctions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestAttributeFunctions.cpp [ 86%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestFormulaUnitsData.cpp [ 86%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestRenderExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderExtension.cpp [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestNewASTNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestNewASTNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestNewASTNode.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestAttributeFunctions.cpp:40: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestAttributeFunctions.cpp:1344:13: warning: 'void test_Attributes_Trigger_Id(int)' defined but not used [-Wunused-function] BUILDSTDERR: START_TEST (test_Attributes_Trigger_Id) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 86%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData_map.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData_map.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestFormulaUnitsData_map.cpp [ 86%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderInformationBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestRenderInformationBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderInformationBase.cpp [ 86%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestConsistencyChecks.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestConsistencyChecks.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestConsistencyChecks.cpp [ 86%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestUnitFormulaFormatter.cpp [ 86%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderPoint.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestRenderPoint.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderPoint.cpp [ 86%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCopyAndClone.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestCopyAndClone.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestCopyAndClone.cpp [ 86%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderReading.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestRenderReading.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderReading.cpp [ 86%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter1.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter1.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestUnitFormulaFormatter1.cpp [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestNewReadMathML.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestNewReadMathML.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestNewReadMathML.cpp [ 86%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestGetMultipleObjects.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestGetMultipleObjects.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestGetMultipleObjects.cpp [ 86%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter2.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter2.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestUnitFormulaFormatter2.cpp [ 86%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestInternalConsistencyChecks.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestInternalConsistencyChecks.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestInternalConsistencyChecks.cpp [ 86%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter3.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter3.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestUnitFormulaFormatter3.cpp [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestNewWriteMathMLFromAST.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestNewWriteMathMLFromAST.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestNewWriteMathMLFromAST.cpp [ 86%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUtilsUnit.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestUtilsUnit.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestUtilsUnit.cpp [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestReadFromFile1.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestReadFromFile1.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestReadFromFile1.cpp [ 86%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestLevelCompatibility.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestLevelCompatibility.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestLevelCompatibility.cpp [ 86%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUtilsUnitDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestUtilsUnitDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestUtilsUnitDefinition.cpp [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestReadFromFile2.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestReadFromFile2.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestReadFromFile2.cpp [ 86%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile5.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile5.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFile5.cpp [ 86%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_units.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/units/test/TestRunner.c [ 86%] Linking CXX executable test_sbml_units cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/units/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_units.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_sbml_units.dir/TestCalculatedUnitDefinitions.cpp.o CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions.cpp.o CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions_undefined.cpp.o CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData.cpp.o CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData_map.cpp.o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter.cpp.o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter1.cpp.o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter2.cpp.o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter3.cpp.o CMakeFiles/test_sbml_units.dir/TestUtilsUnit.cpp.o CMakeFiles/test_sbml_units.dir/TestUtilsUnitDefinition.cpp.o CMakeFiles/test_sbml_units.dir/TestRunner.c.o -o test_sbml_units ../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestReadMathML.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestReadMathML.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestReadMathML.cpp [ 87%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile6.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile6.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFile6.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestReadMathML.cpp:35: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestReadMathML.cpp:1529:13: warning: 'void test_element_implies(int)' defined but not used [-Wunused-function] BUILDSTDERR: START_TEST (test_element_implies) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestReadMathML.cpp:1510:13: warning: 'void test_element_rem(int)' defined but not used [-Wunused-function] BUILDSTDERR: START_TEST (test_element_rem) BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestReadMathML.cpp:1491:13: warning: 'void test_element_quotient(int)' defined but not used [-Wunused-function] BUILDSTDERR: START_TEST (test_element_quotient) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestReadMathML.cpp:1472:13: warning: 'void test_element_min(int)' defined but not used [-Wunused-function] BUILDSTDERR: START_TEST (test_element_min) BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestReadMathML.cpp:1453:13: warning: 'void test_element_max(int)' defined but not used [-Wunused-function] BUILDSTDERR: START_TEST (test_element_max) BUILDSTDERR: ^~~~~~~~~~~~~~~~ [ 87%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestValidASTNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestValidASTNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestValidASTNode.cpp [ 87%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile7.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile7.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFile7.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 87%] Built target test_sbml_units make -f src/sbml/util/test/CMakeFiles/test_sbml_util.dir/build.make src/sbml/util/test/CMakeFiles/test_sbml_util.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/util/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/util/test/CMakeFiles/test_sbml_util.dir/DependInfo.cmake --color= Scanning dependencies of target test_sbml_util make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/sbml/util/test/CMakeFiles/test_sbml_util.dir/build.make src/sbml/util/test/CMakeFiles/test_sbml_util.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 87%] Building C object src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestList.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/util/test && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_util.dir/TestList.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/test/TestList.c [ 87%] Building C object src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestMemory.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/util/test && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_util.dir/TestMemory.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/test/TestMemory.c [ 88%] Building C object src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/util/test && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_util.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/test/TestRunner.c [ 88%] Building C object src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestStack.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/util/test && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_util.dir/TestStack.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/test/TestStack.c [ 88%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestWriteMathML.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestWriteMathML.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestWriteMathML.cpp [ 88%] Building C object src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestStringBuffer.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/util/test && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_util.dir/TestStringBuffer.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/test/TestStringBuffer.c [ 88%] Building C object src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestUtil.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/util/test && /usr/bin/cc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_util.dir/TestUtil.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/util/test/TestUtil.c [ 88%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile8.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile8.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFile8.cpp [ 88%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderWriting.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestRenderWriting.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderWriting.cpp [ 88%] Linking CXX executable test_sbml_util cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/util/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_util.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_sbml_util.dir/TestList.c.o CMakeFiles/test_sbml_util.dir/TestMemory.c.o CMakeFiles/test_sbml_util.dir/TestRunner.c.o CMakeFiles/test_sbml_util.dir/TestStack.c.o CMakeFiles/test_sbml_util.dir/TestStringBuffer.c.o CMakeFiles/test_sbml_util.dir/TestUtil.c.o -o test_sbml_util ../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 88%] Built target test_sbml_util [ 88%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestStyle.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestStyle.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestStyle.cpp [ 88%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestWriteMathMLFromAST.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestWriteMathMLFromAST.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestWriteMathMLFromAST.cpp [ 88%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile9.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile9.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFile9.cpp [ 88%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL2V5.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL2V5.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFileL2V5.cpp [ 88%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestASTNode.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestASTNode.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestASTNode.c make -f src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/build.make src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/validator/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/DependInfo.cmake --color= Scanning dependencies of target test_sbml_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/build.make src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 88%] Building CXX object src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/TestConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_validator.dir/TestConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/test/TestConsistencyValidator.cpp [ 88%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFileL3V2.cpp [ 88%] Building CXX object src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/test/TestFile.cpp [ 88%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_1.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_1.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFileL3V2_1.cpp [ 88%] Building CXX object src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/validator/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/validator/test/TestValidator.cpp [ 88%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestFormulaFormatter.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestFormulaFormatter.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestFormulaFormatter.c [ 88%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_2.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_2.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFileL3V2_2.cpp [ 88%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestFormulaParser.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestFormulaParser.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestFormulaParser.c [ 88%] Linking CXX executable test_sbml_validator cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_validator.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_sbml_validator.dir/TestConsistencyValidator.cpp.o CMakeFiles/test_sbml_validator.dir/TestFile.cpp.o CMakeFiles/test_sbml_validator.dir/TestValidator.cpp.o -o test_sbml_validator ../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 88%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_3.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_3.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFileL3V2_3.cpp [ 89%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestFormulaTokenizer.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestFormulaTokenizer.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestFormulaTokenizer.c [ 89%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestL3FormulaFormatter.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestL3FormulaFormatter.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestL3FormulaFormatter.c [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_4.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_4.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFileL3V2_4.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 89%] Built target test_sbml_validator [ 89%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestL3FormulaParserC.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestL3FormulaParserC.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestL3FormulaParserC.c [ 89%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_math.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/math/test/TestRunner.c [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_5.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_5.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFileL3V2_5.cpp [ 89%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestText.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestText.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestText.cpp [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_6.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_6.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFileL3V2_6.cpp [ 89%] Linking CXX executable test_sbml_math cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/math/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_math.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_sbml_math.dir/TestChildFunctions.cpp.o CMakeFiles/test_sbml_math.dir/TestGetValue.cpp.o CMakeFiles/test_sbml_math.dir/TestL3FormulaParser.cpp.o CMakeFiles/test_sbml_math.dir/TestNewASTNode.cpp.o CMakeFiles/test_sbml_math.dir/TestNewReadMathML.cpp.o CMakeFiles/test_sbml_math.dir/TestNewWriteMathMLFromAST.cpp.o CMakeFiles/test_sbml_math.dir/TestReadFromFile1.cpp.o CMakeFiles/test_sbml_math.dir/TestReadFromFile2.cpp.o CMakeFiles/test_sbml_math.dir/TestReadMathML.cpp.o CMakeFiles/test_sbml_math.dir/TestValidASTNode.cpp.o CMakeFiles/test_sbml_math.dir/TestWriteMathML.cpp.o CMakeFiles/test_sbml_math.dir/TestWriteMathMLFromAST.cpp.o CMakeFiles/test_sbml_math.dir/TestASTNode.c.o CMakeFiles/test_sbml_math.dir/TestFormulaFormatter.c.o CMakeFiles/test_sbml_math.dir/TestFormulaParser.c.o CMakeFiles/test_sbml_math.dir/TestFormulaTokenizer.c.o CMakeFiles/test_sbml_math.dir/TestL3FormulaFormatter.c.o CMakeFiles/test_sbml_math.dir/TestL3FormulaParserC.c.o CMakeFiles/test_sbml_math.dir/TestRunner.c.o -o test_sbml_math ../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 90%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestTransformation.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestTransformation.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestTransformation.cpp [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadSBML.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadSBML.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadSBML.cpp [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRemoveFromParent.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestRemoveFromParent.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestRemoveFromParent.cpp [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRenameIDs.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestRenameIDs.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestRenameIDs.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRequiredAttributes.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestRequiredAttributes.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestRequiredAttributes.cpp BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderWriting.cpp:76: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderWriting.cpp: In function 'void test_RenderWriting_write_model_1(int)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRenderWriting.cpp:137:13: note: variable tracking size limit exceeded with -fvar-tracking-assignments, retrying without BUILDSTDERR: START_TEST (test_RenderWriting_write_model_1) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRequiredElements.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestRequiredElements.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestRequiredElements.cpp [ 91%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestTransformation2D.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestTransformation2D.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestTransformation2D.cpp [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLConstructorException.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBMLConstructorException.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLConstructorException.cpp [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertFromL3V2.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertFromL3V2.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLConvertFromL3V2.cpp [ 91%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_package_render.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml/test/TestRunner.c [ 91%] Linking CXX executable test_sbml_package_render cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_package_render.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_sbml_package_render.dir/TestColorDefinition.cpp.o CMakeFiles/test_sbml_package_render.dir/TestEllipse.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGlobalRenderInformation.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGlobalStyle.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGradientBase.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGradientStop.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive1D.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive2D.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGroup.cpp.o CMakeFiles/test_sbml_package_render.dir/TestImage.cpp.o CMakeFiles/test_sbml_package_render.dir/TestLineEnding.cpp.o CMakeFiles/test_sbml_package_render.dir/TestLinearGradient.cpp.o CMakeFiles/test_sbml_package_render.dir/TestLocalRenderInformation.cpp.o CMakeFiles/test_sbml_package_render.dir/TestLocalStyle.cpp.o CMakeFiles/test_sbml_package_render.dir/TestPolygon.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRadialGradient.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRectangle.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRelAbsVector.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderCubicBezier.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderCurve.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderExtension.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderInformationBase.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderPoint.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderReading.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderWriting.cpp.o CMakeFiles/test_sbml_package_render.dir/TestStyle.cpp.o CMakeFiles/test_sbml_package_render.dir/TestText.cpp.o CMakeFiles/test_sbml_package_render.dir/TestTransformation.cpp.o CMakeFiles/test_sbml_package_render.dir/TestTransformation2D.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRunner.c.o -o test_sbml_package_render ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertStrict.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertStrict.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLConvertStrict.cpp [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLError.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBMLError.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLError.cpp [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBMLNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLNamespaces.cpp [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLParentObject.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBMLParentObject.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLParentObject.cpp [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLTransforms.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBMLTransforms.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLTransforms.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' BUILDSTDERR: In file included from /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLTransforms.cpp:41: BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLTransforms.cpp:787:12: warning: 'void test_SBMLTransforms_replaceIAWithFD(int)' defined but not used [-Wunused-function] BUILDSTDERR: START_TEST(test_SBMLTransforms_replaceIAWithFD) BUILDSTDERR: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make -f src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/build.make src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/DependInfo.cmake --color= [ 91%] Built target test_sbml_math [ 91%] Built target test_sbml_package_render [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBase.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBase.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBase.cpp [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLValidators.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBMLValidators.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLValidators.cpp Scanning dependencies of target test_sbml_xml make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/build.make src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 91%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestCopyAndClone.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestCopyAndClone.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestCopyAndClone.cpp [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBaseIdName.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBaseIdName.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBaseIdName.cpp [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBase_newSetters.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBase_newSetters.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBase_newSetters.cpp [ 92%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLAttributes.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLAttributes.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLAttributes.cpp [ 92%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLError.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLError.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLError.cpp make -f src/bindings/java/CMakeFiles/binding_java_lib.dir/build.make src/bindings/java/CMakeFiles/binding_java_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/java /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/java /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/java/CMakeFiles/binding_java_lib.dir/DependInfo.cmake --color= Scanning dependencies of target binding_java_lib make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/bindings/java/CMakeFiles/binding_java_lib.dir/build.make src/bindings/java/CMakeFiles/binding_java_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 92%] Building CXX object src/bindings/java/CMakeFiles/binding_java_lib.dir/libsbml_wrap.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/java && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dbinding_java_lib_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/java -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/java/../swig -I/builddir/build/BUILD/libSBML-5.17.0-Source/include -I/usr/lib/jvm/java/include -I/usr/lib/jvm/java/include/linux -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/binding_java_lib.dir/libsbml_wrap.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/java/libsbml_wrap.cpp [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestWriteL3SBML.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestWriteL3SBML.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestWriteL3SBML.cpp [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestWriteL3V2SBML.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestWriteL3V2SBML.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestWriteL3V2SBML.cpp [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestWriteSBML.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestWriteSBML.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestWriteSBML.cpp [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestAlgebraicRule.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestAlgebraicRule.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestAlgebraicRule.c [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestAssignmentRule.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestAssignmentRule.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestAssignmentRule.c [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartment.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestCompartment.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestCompartment.c [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartmentType.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestCompartmentType.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestCompartmentType.c [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartmentType_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestCompartmentType_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestCompartmentType_newSetters.c [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartmentVolumeRule.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestCompartmentVolumeRule.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestCompartmentVolumeRule.c [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartment_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestCompartment_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestCompartment_newSetters.c [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestConstraint.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestConstraint.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestConstraint.c [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestConstraint_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestConstraint_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestConstraint_newSetters.c [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestDelay.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestDelay.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestDelay.c [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestEvent.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestEvent.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestEvent.c [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestEventAssignment.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestEventAssignment.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestEventAssignment.c [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestEventAssignment_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestEventAssignment_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestEventAssignment_newSetters.c [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestEvent_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestEvent_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestEvent_newSetters.c [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestFunctionDefinition.c [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestFunctionDefinition_newSetters.c [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestInitialAssignment.c [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestInitialAssignment_newSetters.c [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestKineticLaw.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestKineticLaw.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestKineticLaw.c [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestKineticLaw_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestKineticLaw_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestKineticLaw_newSetters.c [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Compartment.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3Compartment.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3Compartment.c [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Event.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3Event.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3Event.c [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3KineticLaw.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3KineticLaw.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3KineticLaw.c [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3LocalParameter.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3LocalParameter.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3LocalParameter.c [ 94%] Linking CXX shared library libsbmlj.so cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/java && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_java_lib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libsbmlj.so -o libsbmlj.so CMakeFiles/binding_java_lib.dir/libsbml_wrap.cpp.o ../../libsbml-static.a -lbz2 -lz -lminizip -lxml2 [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Model.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3Model.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3Model.c [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Parameter.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3Parameter.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3Parameter.c [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Reaction.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3Reaction.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3Reaction.c [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Species.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3Species.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3Species.c [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3SpeciesReference.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3SpeciesReference.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3SpeciesReference.c [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Trigger.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3Trigger.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3Trigger.c [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Unit.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestL3Unit.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestL3Unit.c [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestListOf.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestListOf.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestListOf.c [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestModel.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestModel.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestModel.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 95%] Built target binding_java_lib make -f src/bindings/perl/CMakeFiles/binding_perl_lib.dir/build.make src/bindings/perl/CMakeFiles/binding_perl_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/perl /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/perl/CMakeFiles/binding_perl_lib.dir/DependInfo.cmake --color= [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestModel_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestModel_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestModel_newSetters.c Scanning dependencies of target binding_perl_lib make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/bindings/perl/CMakeFiles/binding_perl_lib.dir/build.make src/bindings/perl/CMakeFiles/binding_perl_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 95%] Building CXX object src/bindings/perl/CMakeFiles/binding_perl_lib.dir/LibSBML.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/perl && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dbinding_perl_lib_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/perl -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/usr/lib64/perl5/CORE -I/builddir/build/BUILD/libSBML-5.17.0-Source/include -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl/../swig -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/perl -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/binding_perl_lib.dir/LibSBML.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/perl/LibSBML.cpp [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestModifierSpeciesReference.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestModifierSpeciesReference.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestModifierSpeciesReference.c [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestParameter.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestParameter.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestParameter.c [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestParameterRule.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestParameterRule.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestParameterRule.c [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestParameter_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestParameter_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestParameter_newSetters.c [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestPriority.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestPriority.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestPriority.c [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRateRule.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestRateRule.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestRateRule.c [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReaction.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReaction.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReaction.c [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReaction_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReaction_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReaction_newSetters.c [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile1.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile1.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFile1.c [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile2.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile2.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFile2.c [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile3.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile3.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFile3.c [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile4.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile4.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestReadFromFile4.c [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRule.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestRule.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestRule.c [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRule_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestRule_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestRule_newSetters.c [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestRunner.c [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLConvert.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBMLConvert.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLConvert.c [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLDocument.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSBMLDocument.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSBMLDocument.c [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpecies.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSpecies.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSpecies.c [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesConcentrationRule.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSpeciesConcentrationRule.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSpeciesConcentrationRule.c [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSpeciesReference.c [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSpeciesReference_newSetters.c [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesType.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSpeciesType.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSpeciesType.c [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesType_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSpeciesType_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSpeciesType_newSetters.c [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpecies_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSpecies_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSpecies_newSetters.c [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestStoichiometryMath.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestStoichiometryMath.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestStoichiometryMath.c [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSyntaxChecker.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestSyntaxChecker.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestSyntaxChecker.c [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestTrigger.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestTrigger.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestTrigger.c [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnit.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestUnit.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestUnit.c [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestUnitDefinition.c [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestUnitDefinition_newSetters.c [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnitKind.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestUnitKind.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestUnitKind.c [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnit_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_sbml.dir/TestUnit_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/test/TestUnit_newSetters.c [ 97%] Linking CXX executable test_sbml_sbml cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_sbml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_sbml_sbml.dir/TestAncestor.cpp.o CMakeFiles/test_sbml_sbml.dir/TestAttributeFunctions.cpp.o CMakeFiles/test_sbml_sbml.dir/TestConsistencyChecks.cpp.o CMakeFiles/test_sbml_sbml.dir/TestCopyAndClone.cpp.o CMakeFiles/test_sbml_sbml.dir/TestGetMultipleObjects.cpp.o CMakeFiles/test_sbml_sbml.dir/TestInternalConsistencyChecks.cpp.o CMakeFiles/test_sbml_sbml.dir/TestLevelCompatibility.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile5.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile6.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile7.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile8.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile9.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL2V5.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_1.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_2.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_3.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_4.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_5.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_6.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadSBML.cpp.o CMakeFiles/test_sbml_sbml.dir/TestRemoveFromParent.cpp.o CMakeFiles/test_sbml_sbml.dir/TestRenameIDs.cpp.o CMakeFiles/test_sbml_sbml.dir/TestRequiredAttributes.cpp.o CMakeFiles/test_sbml_sbml.dir/TestRequiredElements.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBMLConstructorException.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertFromL3V2.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertStrict.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBMLError.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBMLNamespaces.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBMLParentObject.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBMLTransforms.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBMLValidators.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBase.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBaseIdName.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBase_newSetters.cpp.o CMakeFiles/test_sbml_sbml.dir/TestWriteL3SBML.cpp.o CMakeFiles/test_sbml_sbml.dir/TestWriteL3V2SBML.cpp.o CMakeFiles/test_sbml_sbml.dir/TestWriteSBML.cpp.o CMakeFiles/test_sbml_sbml.dir/TestAlgebraicRule.c.o CMakeFiles/test_sbml_sbml.dir/TestAssignmentRule.c.o CMakeFiles/test_sbml_sbml.dir/TestCompartment.c.o CMakeFiles/test_sbml_sbml.dir/TestCompartmentType.c.o CMakeFiles/test_sbml_sbml.dir/TestCompartmentType_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestCompartmentVolumeRule.c.o CMakeFiles/test_sbml_sbml.dir/TestCompartment_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestConstraint.c.o CMakeFiles/test_sbml_sbml.dir/TestConstraint_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestDelay.c.o CMakeFiles/test_sbml_sbml.dir/TestEvent.c.o CMakeFiles/test_sbml_sbml.dir/TestEventAssignment.c.o CMakeFiles/test_sbml_sbml.dir/TestEventAssignment_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestEvent_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition.c.o CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment.c.o CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestKineticLaw.c.o CMakeFiles/test_sbml_sbml.dir/TestKineticLaw_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Compartment.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Event.c.o CMakeFiles/test_sbml_sbml.dir/TestL3KineticLaw.c.o CMakeFiles/test_sbml_sbml.dir/TestL3LocalParameter.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Model.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Parameter.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Reaction.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Species.c.o CMakeFiles/test_sbml_sbml.dir/TestL3SpeciesReference.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Trigger.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Unit.c.o CMakeFiles/test_sbml_sbml.dir/TestListOf.c.o CMakeFiles/test_sbml_sbml.dir/TestModel.c.o CMakeFiles/test_sbml_sbml.dir/TestModel_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestModifierSpeciesReference.c.o CMakeFiles/test_sbml_sbml.dir/TestParameter.c.o CMakeFiles/test_sbml_sbml.dir/TestParameterRule.c.o CMakeFiles/test_sbml_sbml.dir/TestParameter_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestPriority.c.o CMakeFiles/test_sbml_sbml.dir/TestRateRule.c.o CMakeFiles/test_sbml_sbml.dir/TestReaction.c.o CMakeFiles/test_sbml_sbml.dir/TestReaction_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile1.c.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile2.c.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile3.c.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile4.c.o CMakeFiles/test_sbml_sbml.dir/TestRule.c.o CMakeFiles/test_sbml_sbml.dir/TestRule_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestRunner.c.o CMakeFiles/test_sbml_sbml.dir/TestSBMLConvert.c.o CMakeFiles/test_sbml_sbml.dir/TestSBMLDocument.c.o CMakeFiles/test_sbml_sbml.dir/TestSpecies.c.o CMakeFiles/test_sbml_sbml.dir/TestSpeciesConcentrationRule.c.o CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference.c.o CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestSpeciesType.c.o CMakeFiles/test_sbml_sbml.dir/TestSpeciesType_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestSpecies_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestStoichiometryMath.c.o CMakeFiles/test_sbml_sbml.dir/TestSyntaxChecker.c.o CMakeFiles/test_sbml_sbml.dir/TestTrigger.c.o CMakeFiles/test_sbml_sbml.dir/TestUnit.c.o CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition.c.o CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestUnitKind.c.o CMakeFiles/test_sbml_sbml.dir/TestUnit_newSetters.c.o -o test_sbml_sbml ../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 97%] Built target test_sbml_sbml make -f src/bindings/python/CMakeFiles/binding_python_lib.dir/build.make src/bindings/python/CMakeFiles/binding_python_lib.dir/depend [ 97%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLExceptions.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLExceptions.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLExceptions.cpp [ 98%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLNode.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLNode.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLNode.cpp make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python/CMakeFiles/binding_python_lib.dir/DependInfo.cmake --color= Scanning dependencies of target binding_python_lib make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/bindings/python/CMakeFiles/binding_python_lib.dir/build.make src/bindings/python/CMakeFiles/binding_python_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 98%] Building CXX object src/bindings/python/CMakeFiles/binding_python_lib.dir/libsbml_wrap.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dbinding_python_lib_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/python/../swig -I/builddir/build/BUILD/libSBML-5.17.0-Source/include -I/usr/include/python3.6m -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/binding_python_lib.dir/libsbml_wrap.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/python/libsbml_wrap.cpp [ 98%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestRunner.c make -f src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build.make src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' cd /builddir/build/BUILD/libSBML-5.17.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.17.0-Source /builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/ruby /builddir/build/BUILD/libSBML-5.17.0-Source/build /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/DependInfo.cmake --color= [ 98%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLAttributesC.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLAttributesC.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLAttributesC.c Scanning dependencies of target binding_ruby_lib make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' make -f src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build.make src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 98%] Building CXX object src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/libsbml_wrap.cpp.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dbinding_ruby_lib_EXPORTS -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/ruby -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/bindings/ruby/../swig -I/builddir/build/BUILD/libSBML-5.17.0-Source/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -o CMakeFiles/binding_ruby_lib.dir/libsbml_wrap.cpp.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp [ 98%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLErrorC.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLErrorC.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLErrorC.c [ 98%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLErrorLog.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLErrorLog.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLErrorLog.c [ 98%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLInputStream.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLInputStream.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLInputStream.c BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE std_basic_string_Sl_char_Sg__slice(std::__cxx11::basic_string*, std::__cxx11::basic_string::difference_type, std::__cxx11::basic_string::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5001:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: catch( std::out_of_range ) { BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE std_basic_string_Sl_char_Sg__delete_at(std::__cxx11::basic_string*, std::__cxx11::basic_string::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5047:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: catch (std::out_of_range) BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE std_basic_string_Sl_char_Sg__at(const std::__cxx11::basic_string*, std::__cxx11::basic_string::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5057:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: catch( std::out_of_range ) { BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE std_basic_string_Sl_char_Sg____getitem____SWIG_0(const std::__cxx11::basic_string*, std::__cxx11::basic_string::difference_type, std::__cxx11::basic_string::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5079:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: catch( std::out_of_range ) { BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE std_basic_string_Sl_char_Sg____getitem____SWIG_1(const std::__cxx11::basic_string*, std::__cxx11::basic_string::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5088:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: catch( std::out_of_range ) { BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In member function 'virtual SBMLConverter* SwigDirector_SBMLConverter::clone() const': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5656:12: warning: converting to non-pointer type 'VALUE' {aka 'long unsigned int'} from NULL [-Wconversion-null] BUILDSTDERR: result = rb_funcall(swig_get_self(), rb_intern("clone"), 0, NULL); BUILDSTDERR: ^~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In member function 'virtual SBMLDocument* SwigDirector_SBMLConverter::getDocument()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5674:12: warning: converting to non-pointer type 'VALUE' {aka 'long unsigned int'} from NULL [-Wconversion-null] BUILDSTDERR: result = rb_funcall(swig_get_self(), rb_intern("getDocument"), 0, NULL); BUILDSTDERR: ^~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In member function 'virtual const SBMLDocument* SwigDirector_SBMLConverter::getDocument() const': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5692:12: warning: converting to non-pointer type 'VALUE' {aka 'long unsigned int'} from NULL [-Wconversion-null] BUILDSTDERR: result = rb_funcall(swig_get_self(), rb_intern("getDocument"), 0, NULL); BUILDSTDERR: ^~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In member function 'virtual ConversionProperties SwigDirector_SBMLConverter::getDefaultProperties() const': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5709:12: warning: converting to non-pointer type 'VALUE' {aka 'long unsigned int'} from NULL [-Wconversion-null] BUILDSTDERR: result = rb_funcall(swig_get_self(), rb_intern("getDefaultProperties"), 0, NULL); BUILDSTDERR: ^~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In member function 'virtual SBMLNamespaces* SwigDirector_SBMLConverter::getTargetNamespaces()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5726:12: warning: converting to non-pointer type 'VALUE' {aka 'long unsigned int'} from NULL [-Wconversion-null] BUILDSTDERR: result = rb_funcall(swig_get_self(), rb_intern("getTargetNamespaces"), 0, NULL); BUILDSTDERR: ^~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In member function 'virtual ConversionProperties* SwigDirector_SBMLConverter::getProperties() const': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5800:12: warning: converting to non-pointer type 'VALUE' {aka 'long unsigned int'} from NULL [-Wconversion-null] BUILDSTDERR: result = rb_funcall(swig_get_self(), rb_intern("getProperties"), 0, NULL); BUILDSTDERR: ^~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In member function 'virtual int SwigDirector_SBMLConverter::convert()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5815:12: warning: converting to non-pointer type 'VALUE' {aka 'long unsigned int'} from NULL [-Wconversion-null] BUILDSTDERR: result = rb_funcall(swig_get_self(), rb_intern("convert"), 0, NULL); BUILDSTDERR: ^~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In member function 'virtual SBMLValidator* SwigDirector_SBMLValidator::clone() const': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5848:12: warning: converting to non-pointer type 'VALUE' {aka 'long unsigned int'} from NULL [-Wconversion-null] BUILDSTDERR: result = rb_funcall(swig_get_self(), rb_intern("clone"), 0, NULL); BUILDSTDERR: ^~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In member function 'virtual SBMLDocument* SwigDirector_SBMLValidator::getDocument()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5866:12: warning: converting to non-pointer type 'VALUE' {aka 'long unsigned int'} from NULL [-Wconversion-null] BUILDSTDERR: result = rb_funcall(swig_get_self(), rb_intern("getDocument"), 0, NULL); BUILDSTDERR: ^~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In member function 'virtual const SBMLDocument* SwigDirector_SBMLValidator::getDocument() const': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5884:12: warning: converting to non-pointer type 'VALUE' {aka 'long unsigned int'} from NULL [-Wconversion-null] BUILDSTDERR: result = rb_funcall(swig_get_self(), rb_intern("getDocument"), 0, NULL); BUILDSTDERR: ^~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In member function 'virtual unsigned int SwigDirector_SBMLValidator::validate()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5916:12: warning: converting to non-pointer type 'VALUE' {aka 'long unsigned int'} from NULL [-Wconversion-null] BUILDSTDERR: result = rb_funcall(swig_get_self(), rb_intern("validate"), 0, NULL); BUILDSTDERR: ^~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In member function 'virtual void SwigDirector_SBMLValidator::clearFailures()': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5930:12: warning: converting to non-pointer type 'VALUE' {aka 'long unsigned int'} from NULL [-Wconversion-null] BUILDSTDERR: result = rb_funcall(swig_get_self(), rb_intern("clearFailures"), 0, NULL); BUILDSTDERR: ^~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In member function 'virtual SBMLResolver* SwigDirector_SBMLResolver::clone() const': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5956:12: warning: converting to non-pointer type 'VALUE' {aka 'long unsigned int'} from NULL [-Wconversion-null] BUILDSTDERR: result = rb_funcall(swig_get_self(), rb_intern("clone"), 0, NULL); BUILDSTDERR: ^~~~~~~~~~ [ 98%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLNamespaces.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLNamespaces.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLNamespaces.c [ 98%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLNode_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLNode_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLNode_newSetters.c [ 98%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLOutputStream.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLOutputStream.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLOutputStream.c [ 98%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLToken.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLToken.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLToken.c [ 98%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLToken_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLToken_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLToken_newSetters.c BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::__cxx11::basic_string; Difference = long int]': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:4999:127: required from here BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:4019:69: warning: comparison of integer expressions of different signedness: 'long int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:4019:82: warning: comparison of integer expressions of different signedness: 'long int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::__cxx11::basic_string; Difference = int]': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5122:131: required from here BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:4019:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:4019:82: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: ~~^~~~~~~ [ 98%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLTriple.c.o cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/c++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.17.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/test_sbml_xml.dir/TestXMLTriple.c.o -c /builddir/build/BUILD/libSBML-5.17.0-Source/src/sbml/xml/test/TestXMLTriple.c [ 99%] Linking CXX executable test_sbml_xml cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/sbml/xml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_xml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/test_sbml_xml.dir/TestCopyAndClone.cpp.o CMakeFiles/test_sbml_xml.dir/TestXMLAttributes.cpp.o CMakeFiles/test_sbml_xml.dir/TestXMLError.cpp.o CMakeFiles/test_sbml_xml.dir/TestXMLExceptions.cpp.o CMakeFiles/test_sbml_xml.dir/TestXMLNode.cpp.o CMakeFiles/test_sbml_xml.dir/TestRunner.c.o CMakeFiles/test_sbml_xml.dir/TestXMLAttributesC.c.o CMakeFiles/test_sbml_xml.dir/TestXMLErrorC.c.o CMakeFiles/test_sbml_xml.dir/TestXMLErrorLog.c.o CMakeFiles/test_sbml_xml.dir/TestXMLInputStream.c.o CMakeFiles/test_sbml_xml.dir/TestXMLNamespaces.c.o CMakeFiles/test_sbml_xml.dir/TestXMLNode_newSetters.c.o CMakeFiles/test_sbml_xml.dir/TestXMLOutputStream.c.o CMakeFiles/test_sbml_xml.dir/TestXMLToken.c.o CMakeFiles/test_sbml_xml.dir/TestXMLToken_newSetters.c.o CMakeFiles/test_sbml_xml.dir/TestXMLTriple.c.o -o test_sbml_xml ../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lxml2 BUILDSTDERR: ../../../libsbml-static.a: error adding symbols: Memory exhausted BUILDSTDERR: collect2: error: ld returned 1 exit status BUILDSTDERR: make[2]: *** [src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/build.make:317: src/sbml/xml/test/test_sbml_xml] Error 1 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' BUILDSTDERR: make[1]: *** [CMakeFiles/Makefile2:2648: src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/all] Error 2 BUILDSTDERR: make[1]: *** Waiting for unfinished jobs.... BUILDSTDERR: virtual memory exhausted: Cannot allocate memory BUILDSTDERR: make[2]: *** [src/bindings/python/CMakeFiles/binding_python_lib.dir/build.make:649: src/bindings/python/CMakeFiles/binding_python_lib.dir/libsbml_wrap.cpp.o] Error 1 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' BUILDSTDERR: make[1]: *** [CMakeFiles/Makefile2:2953: src/bindings/python/CMakeFiles/binding_python_lib.dir/all] Error 2 BUILDSTDERR: {standard input}: Assembler messages: BUILDSTDERR: {standard input}:1355967: Warning: end of file not at end of a line; newline inserted BUILDSTDERR: {standard input}:1357353: Error: unknown pseudo-op: `.lvl194' BUILDSTDERR: {standard input}: Error: open CFI at the end of file; missing .cfi_endproc directive BUILDSTDERR: c++: fatal error: Killed signal terminated program cc1plus BUILDSTDERR: compilation terminated. BUILDSTDERR: make[2]: *** [src/bindings/perl/CMakeFiles/binding_perl_lib.dir/build.make:626: src/bindings/perl/CMakeFiles/binding_perl_lib.dir/LibSBML.cpp.o] Error 1 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' BUILDSTDERR: make[1]: *** [CMakeFiles/Makefile2:2863: src/bindings/perl/CMakeFiles/binding_perl_lib.dir/all] Error 2 BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_XMLErrorLog_add(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:1374:83: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: #define SWIG_ConvertPtr(obj, pptr, type, flags) SWIG_Ruby_ConvertPtrAndOwn(obj, pptr, type, flags, 0) BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:102522:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SBase_matchesRequiredSBMLNamespacesForAddition(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:1374:83: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: #define SWIG_ConvertPtr(obj, pptr, type, flags) SWIG_Ruby_ConvertPtrAndOwn(obj, pptr, type, flags, 0) BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:21842:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SBase_matchesSBMLNamespaces(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:1374:83: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: #define SWIG_ConvertPtr(obj, pptr, type, flags) SWIG_Ruby_ConvertPtrAndOwn(obj, pptr, type, flags, 0) BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:21729:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ReactionGlyph_getSpeciesReferenceGlyph(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:197886:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_GeneralGlyph_getReferenceGlyph(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:195286:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfReplacedElements_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:140878:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_CompSBasePlugin_getReplacedElement(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:128235:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_CVTerm_getNestedCVTerm(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:107938:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SBMLErrorLog_getNumFailsWithSeverity(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:103172:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfConstraints_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:59446:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_UnitDefinition_getUnit(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:43310:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfUnits_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:41691:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getConstraint(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:30022:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ASTBase_setType(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:116735:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Iterator___sub__(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:3415:27: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: res = SWIG_AsVal_long (obj, val ? &v : 0); BUILDSTDERR: ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:8310:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ConstIterator___sub__(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:3415:27: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: res = SWIG_AsVal_long (obj, val ? &v : 0); BUILDSTDERR: ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:7727:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Compartment_setSpatialDimensions(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:47630:36: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_double(argv[1], NULL); BUILDSTDERR: ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Unit_setExponent(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:40867:36: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_double(argv[1], NULL); BUILDSTDERR: ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SBase_getDisabledPlugin(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:20865:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_GeneralGlyph_getSubGlyph(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:195405:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Curve_getCurveSegment(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:190458:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfLineSegments_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:189757:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOf_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:22875:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_CVTerm_getResourceURI(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:107322:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfLocalStyles_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:324200:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfLocalStyles_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:324020:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfLocalRenderInformation_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:323115:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfLocalRenderInformation_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:322935:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfLineEndings_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:321587:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfLineEndings_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:321407:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGradientStops_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:320565:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGradientStops_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:320385:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGlobalStyles_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:318485:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGlobalStyles_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:318305:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGlobalRenderInformation_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:317336:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGlobalRenderInformation_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:317156:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfDrawables_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:315664:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfDrawables_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:315484:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfColorDefinitions_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:313690:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfColorDefinitions_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:313510:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_DefaultValues_setVTextAnchor(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:311874:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_DefaultValues_setTextAnchor(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:311706:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_DefaultValues_setFontStyle(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:311538:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_DefaultValues_setFontWeight(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:311370:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_DefaultValues_setFillRule(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:311022:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_DefaultValues_setSpreadMethod(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:310360:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_LocalRenderInformation_removeStyle(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:304126:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_LocalRenderInformation_removeLocalStyle(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:304038:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_LocalRenderInformation_getStyle(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:303651:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_LocalRenderInformation_getLocalStyle(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:303533:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderGroup_removeElement(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:298097:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderGroup_getElement(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:297637:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderGroup_setVtextAnchor(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:297092:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderGroup_setVTextAnchor(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:296995:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderGroup_setTextAnchor(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:296756:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderGroup_setFontStyle(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:296588:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderGroup_setFontWeight(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:296420:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Text_setVTextAnchor(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:283146:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Text_setTextAnchor(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:282981:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Text_setFontStyle(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:282816:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Text_setFontWeight(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:282651:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_GlobalRenderInformation_removeGlobalStyle(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:277296:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_GlobalRenderInformation_getStyle(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:276941:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_GlobalRenderInformation_getGlobalStyle(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:276823:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_GradientBase_removeGradientStop(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:268754:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_GradientBase_getGradientStop(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:268508:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_GradientBase_setSpreadMethod(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:268181:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderInformationBase_removeLineEnding(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:267439:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderInformationBase_getLineEnding(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:267179:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderInformationBase_removeColorDefinition(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:266387:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderInformationBase_getColorDefinition(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:266127:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_GraphicalPrimitive2D_setFillRule(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5219:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:264401:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderLayoutPlugin_removeLocalRenderInformation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:261009:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderLayoutPlugin_getRenderInformation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:260776:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderListOfLayoutsPlugin_removeGlobalRenderInformation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:260209:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderListOfLayoutsPlugin_getRenderInformation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:259976:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfTransitions_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:257471:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfTransitions_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:257291:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Transition_removeFunctionTerm(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:256333:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Transition_getFunctionTerm(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:256073:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Transition_removeOutput(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:255825:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Transition_getOutputBySpecies(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:255625:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Transition_getOutput(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:255440:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Transition_removeInput(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:255192:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Transition_getInputBySpecies(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:254992:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Transition_getInput(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:254807:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfQualitativeSpecies_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:253809:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfQualitativeSpecies_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:253629:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfOutputs_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:251861:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfOutputs_getBySpecies(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:251741:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfOutputs_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:251556:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfInputs_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:249892:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfInputs_getBySpecies(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:249772:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfInputs_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:249587:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfFunctionTerms_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:247033:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfFunctionTerms_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:246853:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_QualModelPlugin_removeTransition(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:245281:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_QualModelPlugin_getTransition(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:245045:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_QualModelPlugin_removeQualitativeSpecies(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:244773:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_QualModelPlugin_getQualitativeSpecies(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:244537:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiSpeciesType_removeInSpeciesTypeBond(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:240076:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiSpeciesType_getInSpeciesTypeBond(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:239816:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiSpeciesType_removeSpeciesTypeComponentIndex(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:239568:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiSpeciesType_getSpeciesTypeComponentIndex(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:239308:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiSpeciesType_removeSpeciesTypeInstance(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:239060:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiSpeciesType_getSpeciesTypeInstance(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:238800:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiSpeciesType_removeSpeciesFeatureType(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:238552:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiSpeciesType_getSpeciesFeatureType(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:238292:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SubListOfSpeciesFeatures_setRelation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:237126:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SubListOfSpeciesFeatures_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:236958:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SubListOfSpeciesFeatures_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:236778:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesTypeComponentMapInProducts_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:235862:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesTypeComponentMapInProducts_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:235682:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesFeatures_removeSubListOfSpeciesFeatures(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:233910:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesFeatures_getSubListOfSpeciesFeatures(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:233730:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesFeatures_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:233512:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesFeatures_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:233332:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SpeciesFeature_removeSpeciesFeatureValue(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:232553:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SpeciesFeature_getSpeciesFeatureValue(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:232293:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesTypeComponentIndexes_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:231027:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesTypeComponentIndexes_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:230847:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesFeatureTypes_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:229256:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesFeatureTypes_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:229076:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SpeciesFeatureType_removePossibleSpeciesFeatureValue(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:228405:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SpeciesFeatureType_getPossibleSpeciesFeatureValue(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:228145:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfOutwardBindingSites_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:227050:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfOutwardBindingSites_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:226870:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_OutwardBindingSite_setBindingStatus(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:226058:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfInSpeciesTypeBonds_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:225198:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfInSpeciesTypeBonds_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:225018:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesTypeInstances_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:223427:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesTypeInstances_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:223247:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfCompartmentReferences_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:221656:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfCompartmentReferences_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:221476:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesFeatureValues_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:219996:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesFeatureValues_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:219816:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfPossibleSpeciesFeatureValues_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:218558:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfPossibleSpeciesFeatureValues_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:218378:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiSpeciesReferencePlugin_removeSpeciesTypeComponentMapInProduct(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:216610:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiSpeciesReferencePlugin_getSpeciesTypeComponentMapInProduct(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:216374:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiSpeciesPlugin_removeSpeciesFeature(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:215276:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiSpeciesPlugin_getSubListOfSpeciesFeatures(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:215040:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiSpeciesPlugin_getSpeciesFeature(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:214763:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiSpeciesPlugin_removeOutwardBindingSite(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:214491:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiSpeciesPlugin_getOutwardBindingSite(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:214255:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiCompartmentPlugin_removeCompartmentReference(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:213537:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiCompartmentPlugin_getCompartmentReference(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:213301:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_LayoutModelPlugin_getLayout(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:209216:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfLayouts_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:207988:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfLayouts_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:207808:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Layout_removeAdditionalGraphicalObject(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:207080:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Layout_removeTextGlyph(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:206995:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Layout_removeReactionGlyph(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:206878:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Layout_removeSpeciesGlyph(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:206795:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Layout_removeCompartmentGlyph(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:206712:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Layout_getGeneralGlyph(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:205851:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Layout_getAdditionalGraphicalObject(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:205733:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Layout_getTextGlyph(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:205613:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Layout_getReactionGlyph(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:205495:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Layout_getSpeciesGlyph(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:205377:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Layout_getCompartmentGlyph(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:205259:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfTextGlyphs_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:203555:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfTextGlyphs_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:203375:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfReactionGlyphs_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:202801:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfReactionGlyphs_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:202621:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesGlyphs_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:202047:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesGlyphs_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:201867:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfCompartmentGlyphs_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:201317:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfCompartmentGlyphs_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:201137:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ReactionGlyph_removeSpeciesReferenceGlyph(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:198404:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesReferenceGlyphs_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:197038:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesReferenceGlyphs_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:196858:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_GeneralGlyph_removeSubGlyph(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:196052:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_GeneralGlyph_removeReferenceGlyph(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:195962:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfReferenceGlyphs_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:194237:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfReferenceGlyphs_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:194057:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SpeciesReferenceGlyph_setRole(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:191653:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGraphicalObjects_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:185202:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGraphicalObjects_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:185018:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfMembers_getByIdRef(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:178429:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfMembers_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:178224:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfMembers_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:178044:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGroups_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:177118:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGroups_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:176938:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Group_removeMember(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:175109:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Group_getMemberByIdRef(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:174909:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Group_getMember(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:174724:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Group_setKind(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:174404:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_GroupsModelPlugin_removeGroup(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:173403:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_GroupsModelPlugin_getGroup(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:173143:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGeneProducts_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:167962:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGeneProducts_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:167702:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfObjectives_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:161952:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfObjectives_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:161692:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Objective_removeFluxObjective(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:160947:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Objective_getFluxObjective(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:160687:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Objective_setType(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:160367:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGeneAssociations_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:159555:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGeneAssociations_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:159375:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfFluxObjectives_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:157862:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfFluxObjectives_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:157602:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfFluxBounds_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:156042:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfFluxBounds_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:155862:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_FluxBound_setOperation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:155048:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_FbcModelPlugin_removeGeneAssociation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:151030:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_FbcModelPlugin_getGeneAssociation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:150794:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_FbcModelPlugin_removeGeneProduct(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:150546:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_FbcModelPlugin_getGeneProduct(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:150286:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_FbcModelPlugin_removeObjective(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:149825:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_FbcModelPlugin_getObjective(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:149565:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_FbcModelPlugin_removeFluxBound(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:149293:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_FbcModelPlugin_getFluxBound(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:149018:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Submodel_removeDeletion(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:146001:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Submodel_getDeletion(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:145741:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSubmodels_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:141672:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSubmodels_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:141492:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfPorts_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:140365:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfPorts_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:140185:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfModelDefinitions_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:139635:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfModelDefinitions_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:139455:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfExternalModelDefinitions_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:138905:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfExternalModelDefinitions_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:138725:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfDeletions_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:138175:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfDeletions_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:137995:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_CompSBMLDocumentPlugin_removeExternalModelDefinition(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:131666:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_CompSBMLDocumentPlugin_getModel(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:131439:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_CompSBMLDocumentPlugin_getExternalModelDefinition(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:131250:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_CompSBMLDocumentPlugin_removeModelDefinition(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:131002:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_CompSBMLDocumentPlugin_getModelDefinition(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:130747:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_CompModelPlugin_getPort(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:129704:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_CompModelPlugin_getSubmodel(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:129294:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ASTNode_getPlugin(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:123317:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ASTBase_getPlugin(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:118773:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ASTBase_addPlugin(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:118604:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_CVTerm_setBiologicalQualifierType(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:107626:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_CVTerm_setModelQualifierType(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:107538:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_XMLNode_getChild(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:95379:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_XMLToken_getNamespacePrefix(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:93151:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_XMLToken_removeNamespace(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:92905:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_XMLNamespaces_getPrefix(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:89739:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_XMLNamespaces_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:89436:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ConversionProperties_getOption(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:80798:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfEventAssignments_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:72565:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfEventAssignments_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:72385:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfEvents_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:71039:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfEvents_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:70859:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Event_removeEventAssignment(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:70245:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Event_getEventAssignment(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:70041:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesReferences_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:68103:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesReferences_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:67919:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SpeciesReference_appendAnnotation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:67453:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SpeciesReference_setAnnotation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:67334:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_KineticLaw_removeLocalParameter(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:65602:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_KineticLaw_removeParameter(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:65514:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_KineticLaw_getLocalParameter(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:65080:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_KineticLaw_getParameter(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:64923:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfReactions_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:63700:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfReactions_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:63516:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Reaction_removeModifier(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:62918:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Reaction_removeProduct(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:62798:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Reaction_removeReactant(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:62678:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Reaction_getModifier(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:62426:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Reaction_getProduct(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:62205:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Reaction_getReactant(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:61984:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfRules_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:57591:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfRules_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:57366:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfInitialAssignments_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:55672:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfInitialAssignments_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:55492:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfLocalParameters_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:54146:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfLocalParameters_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:53925:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfParameters_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:52985:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfParameters_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:52805:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpecies_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:51401:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpecies_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:51221:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfCompartments_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:48824:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfCompartments_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:48644:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesTypes_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:46681:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfSpeciesTypes_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:46501:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfCompartmentTypes_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:45604:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfCompartmentTypes_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:45424:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfUnitDefinitions_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:44527:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfUnitDefinitions_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:44306:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfFunctionDefinitions_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:39253:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfFunctionDefinitions_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:39073:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_FunctionDefinition_getArgument(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:38405:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_removeEvent(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:34310:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_removeReaction(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:34190:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_removeRule(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:33993:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_removeInitialAssignment(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:33869:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_removeParameter(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:33749:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_removeSpecies(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:33629:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_removeCompartment(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:33509:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_removeSpeciesType(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:33389:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_removeCompartmentType(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:33269:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_removeUnitDefinition(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:33149:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_removeFunctionDefinition(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:33029:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getEvent(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:30694:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getModifierSpeciesReference(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:30533:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getSpeciesReference(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:30408:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getReaction(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:30223:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getRateRuleByVariable(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:29939:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getAssignmentRuleByVariable(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:29814:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getRateRule(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:29689:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getAssignmentRule(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:29564:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getRuleByVariable(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:29439:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getRule(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:29250:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getInitialAssignmentBySymbol(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:29081:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getInitialAssignment(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:28935:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getParameter(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:28675:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getSpecies(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:28454:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getCompartment(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:28233:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getSpeciesType(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:28012:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getCompartmentType(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:27791:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getUnitDefinition(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:27570:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_getFunctionDefinition(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:27349:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_appendAnnotation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:26144:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Model_setAnnotation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:26025:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SBase_getPlugin(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:20718:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SBase_setSBOTerm(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:19680:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SBase_appendNotes(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:19478:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SBase_replaceTopLevelAnnotationElement(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:19173:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SBase_appendAnnotation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:18849:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SBase_setAnnotation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:18730:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SBase_getElementByMetaId(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:16696:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_SBase_getElementBySId(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:16567:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderCurve_getElement(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:293130:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderCurve_getCurveElement(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:293249:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Polygon_getElement(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:294499:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderInformationBase_removeGradientDefinition(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:266931:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_FbcOr_removeAssociation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:171344:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiModelPlugin_removeMultiSpeciesType(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:212455:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_Polygon_removeElement(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:294761:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_FbcAnd_removeAssociation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:170108:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfMultiSpeciesTypes_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:240990:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfCurveElements_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:314724:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfFbcAssociations_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:164844:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGradientDefinitions_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:319519:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_FbcAnd_getAssociation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:169695:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_FbcOr_getAssociation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:170931:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_MultiModelPlugin_getMultiSpeciesType(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:212189:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_RenderInformationBase_getGradientDefinition(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:266643:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfFbcAssociations_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:164532:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfCurveElements_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:314540:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfMultiSpeciesTypes_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:240806:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ListOfGradientDefinitions_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:2703:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:319335:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In function 'VALUE _wrap_ASTNode_setDefinitionURL(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:122396:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 99%] Linking CXX shared library libSBML.so cd /builddir/build/BUILD/libSBML-5.17.0-Source/build/src/bindings/ruby && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_ruby_lib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libSBML.so -o libSBML.so CMakeFiles/binding_ruby_lib.dir/libsbml_wrap.cpp.o ../../libsbml-static.a -lruby -lbz2 -lz -lminizip -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' [ 99%] Built target binding_ruby_lib make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.17.0-Source/build' BUILDSTDERR: make: *** [Makefile:166: all] Error 2 BUILDSTDERR: error: Bad exit status from /var/tmp/rpm-tmp.GrPKZB (%build) RPM build errors: BUILDSTDERR: Bad exit status from /var/tmp/rpm-tmp.GrPKZB (%build) Child return code was: 1 EXCEPTION: [Error()] Traceback (most recent call last): File "/usr/lib/python3.6/site-packages/mockbuild/trace_decorator.py", line 96, in trace result = func(*args, **kw) File "/usr/lib/python3.6/site-packages/mockbuild/util.py", line 626, in do raise exception.Error("Command failed: \n # %s\n%s" % (command, output), child.returncode) mockbuild.exception.Error: Command failed: # bash --login -c /usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/libsbml.spec